Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CHDH	Gene	0	31.01	9.26	375.38	47.80	0.93	39.89	77.96	219.34	54.84	287.42	8.03	72.43	7.05	1.16	86.17	19.49	6.04	24.31	24.88	1.23	18.79	2.29	10.10	3.17	48.15	1.50	2.33	0.91	2.08
2	315251	Transcript	0	32.85	7.20	472.05	49.50	0.22	47.63	87.22	253.14	44.94	325.43	8.12	80.04	6.35	0.32	64.54	19.44	8.77	26.34	24.03	0.99	20.63	2.02	12.82	3.32	54.37	1.76	0.43	0.52	1.09
3	467802	Transcript	0	0.00	0.00	5.36	0.00	0.00	0.00	1.89	9.86	0.00	1.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	481668	Transcript	0	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.00	0.00	0.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	IG19	Intergenic	0	0.65	0.00	6.64	13.14	0.00	0.00	4.92	2.81	0.00	3.53	0.00	0.56	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.44	0.00	0.00	0.00	0.87	0.00	0.00	0.00	0.00
6	IG19_SR1	SilentIntergenicRegion	0	0.85	0.00	8.66	17.14	0.00	0.00	6.43	3.67	0.00	4.60	0.00	0.73	0.00	0.00	2.19	0.00	0.00	0.00	0.00	0.00	0.57	0.00	0.00	0.00	1.14	0.00	0.00	0.00	0.00
7	ER1a	ExonRegion	0	7.16	1.01	31.34	13.41	0.81	7.01	17.32	26.42	2.46	42.84	0.36	8.24	0.97	0.22	19.29	6.15	2.21	7.35	1.97	0.00	3.31	0.30	2.99	0.36	8.12	0.00	0.00	0.00	0.00
8	E1_Da	NovelBoundary	0	2.60	0.00	8.32	16.82	0.00	0.00	5.55	4.48	1.19	7.31	0.00	7.47	0.00	0.00	25.91	3.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1a_E4a	KnownJunction	0	8.08	0.00	103.17	9.92	0.00	10.70	31.41	87.24	1.37	67.59	1.36	15.81	0.00	0.00	16.14	3.75	2.25	9.25	16.18	0.00	3.37	0.00	0.00	0.00	8.71	0.00	0.00	0.00	0.00
10	I1	Intron	0	1.05	0.26	6.49	2.34	0.00	1.07	1.48	2.56	0.71	4.95	0.10	1.26	0.16	0.00	0.79	0.68	0.18	1.02	1.70	0.00	0.35	0.15	0.07	0.00	0.70	0.00	0.00	0.00	0.00
11	I1_AR1	ActiveIntronRegion	0	1.79	0.90	15.50	4.99	0.00	2.11	3.65	4.79	0.94	9.70	0.33	2.92	0.54	0.00	1.29	2.32	0.62	2.68	3.12	0.00	0.99	0.00	0.25	0.00	1.00	0.00	0.00	0.00	0.00
12	I1_SR1	SilentIntronRegion	0	0.74	0.00	2.75	1.25	0.00	0.64	0.58	1.63	0.61	2.99	0.00	0.57	0.00	0.00	0.58	0.00	0.00	0.33	1.11	0.00	0.08	0.21	0.00	0.00	0.58	0.00	0.00	0.00	0.00
13	E2_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	2.92	0.00	0.00	5.55	0.00	4.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	ER2a	ExonRegion	0	0.00	0.00	2.50	0.00	0.00	0.00	1.49	5.78	0.00	1.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E2_Da	NovelBoundary	0	0.00	0.00	1.32	0.00	0.00	0.00	0.00	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.49	0.00	0.00	0.00	0.00
16	E2a_E4a	KnownJunction	0	0.00	0.00	8.22	0.00	0.00	0.00	2.29	13.93	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER3a	ExonRegion	0	0.00	0.00	0.03	0.00	0.00	0.00	0.00	0.00	0.00	0.12	0.00	0.00	0.00	0.00	0.00	0.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	ER4a	ExonRegion	0	20.26	3.70	176.50	10.61	0.00	17.50	33.25	94.98	12.26	126.30	1.02	25.10	2.54	0.89	19.01	16.32	4.46	10.26	6.82	0.00	7.88	0.69	3.79	0.58	16.93	0.00	0.00	0.00	0.00
21	E4a_E5a	KnownJunction	0	16.46	4.85	231.78	16.82	0.00	26.13	33.07	87.24	18.64	129.78	0.00	20.39	1.50	0.84	9.97	0.00	6.64	18.75	16.18	0.00	15.08	2.48	7.34	2.93	26.86	0.00	0.00	0.00	0.00
22	I4_SR3	SilentIntronRegion	0	0.87	0.07	0.70	0.00	0.00	0.17	1.03	0.31	0.61	3.59	0.06	0.91	0.00	0.00	1.85	0.12	0.05	0.09	0.25	0.00	0.24	0.00	0.00	0.00	0.24	0.00	0.03	0.00	0.00
23	E5_Aa	NovelBoundary	0	2.48	0.00	6.33	0.00	0.00	0.00	2.35	0.00	0.00	3.67	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	0	25.35	1.65	234.02	19.14	0.57	18.21	36.65	93.02	14.80	122.58	2.08	26.01	3.99	0.17	21.49	8.08	3.08	19.50	9.43	1.48	6.70	0.98	5.83	2.02	15.15	0.18	0.43	0.00	0.27
25	E5_Da	KnownBoundary	0	32.56	0.00	337.70	19.41	0.00	14.04	35.13	73.85	14.74	122.19	0.00	26.78	8.82	0.00	50.03	0.00	2.68	23.12	0.00	6.78	9.43	1.99	9.21	3.05	21.63	0.00	0.00	0.00	4.09
26	ER5b	ExonRegion	0	25.16	2.11	290.66	25.72	0.00	19.86	38.95	89.39	24.03	139.56	1.40	38.66	4.84	0.00	46.61	8.90	3.78	28.39	13.94	0.65	10.61	1.91	9.87	0.74	21.32	0.00	0.00	0.00	1.37
27	E5_Db	KnownBoundary	0	26.54	0.00	305.71	50.69	0.00	21.56	36.85	83.71	33.71	176.68	4.56	39.91	3.66	0.00	71.76	7.04	5.72	23.89	16.18	0.00	5.37	0.00	13.30	0.00	26.29	0.00	0.00	0.00	0.00
28	ER5c	ExonRegion	0	27.59	2.51	378.90	17.61	1.05	19.45	47.45	121.31	18.36	172.56	3.08	58.41	3.57	0.39	47.91	11.28	4.30	28.94	9.96	0.59	8.47	1.45	11.50	0.92	26.32	1.35	0.00	0.35	0.00
29	E5c_E6a	KnownJunction	0	18.64	8.63	470.74	40.33	0.00	18.99	61.45	165.02	29.36	163.94	8.98	67.41	1.53	0.00	67.77	14.61	8.85	22.99	0.00	0.00	5.01	2.14	6.50	2.21	31.10	0.00	0.00	0.00	0.00
30	ER6a	ExonRegion	0	38.96	8.02	407.67	42.19	0.00	41.02	87.06	248.29	46.21	321.86	7.10	110.65	4.52	0.45	51.99	20.58	10.61	29.45	19.71	1.85	20.59	2.57	10.18	5.55	55.95	2.05	0.00	0.00	0.00
31	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E6a_E7a	KnownJunction	0	46.19	8.82	547.73	37.53	0.00	87.79	87.71	449.98	58.59	445.11	14.99	112.32	11.18	0.00	64.38	23.87	16.39	50.86	48.55	0.00	29.76	8.70	17.73	12.86	69.67	8.75	0.00	0.00	0.00
33	ER7a	ExonRegion	0	42.08	10.64	611.46	56.87	0.00	61.46	112.77	336.27	61.86	406.51	7.55	116.86	5.26	0.53	60.57	26.14	10.80	33.02	19.88	1.49	32.39	2.94	16.30	5.30	68.49	1.93	0.00	0.00	0.00
34	E7_Da	NovelBoundary	0	0.00	0.00	1.20	0.00	0.00	1.96	0.00	0.00	3.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E7a_E8a	KnownJunction	0	51.73	4.85	789.08	68.37	0.00	72.36	183.14	349.95	75.16	625.47	9.21	125.60	6.69	0.00	85.51	34.88	14.61	28.51	16.18	4.13	44.40	0.00	14.73	11.96	84.98	6.48	0.00	0.00	0.00
36	ER8a	ExonRegion	0	45.30	15.28	620.78	50.54	0.00	85.04	128.60	369.98	56.20	506.58	10.58	103.72	7.77	0.00	64.43	29.38	10.54	32.14	39.56	0.65	30.52	2.82	12.86	2.47	81.73	3.55	0.00	0.17	1.52
37	E8_Da	NovelBoundary	0	7.73	0.00	18.49	10.14	0.00	1.84	8.35	0.00	0.00	10.91	0.00	5.66	0.00	0.00	0.00	0.00	1.15	9.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E8a_E9a	KnownJunction	0	24.95	4.85	533.65	40.12	0.00	41.71	105.33	229.42	37.91	322.32	3.73	71.44	9.94	0.00	35.08	27.39	8.80	33.01	40.46	0.00	14.80	0.00	18.47	0.00	50.08	0.00	0.00	2.02	0.00
39	E8a_E10a	NovelJunction	0	0.00	0.00	21.65	0.00	0.00	0.00	4.98	0.00	0.00	3.36	1.61	0.00	0.00	0.00	0.00	0.00	2.00	4.62	0.00	3.64	0.00	0.00	0.00	0.00	3.07	0.00	0.00	0.00	0.00
40	I8	Intron	0	3.23	0.57	12.16	1.91	0.00	1.70	5.90	8.49	3.43	11.01	0.00	3.18	0.00	0.00	5.55	1.54	1.32	2.11	3.12	0.00	0.38	0.00	0.00	0.38	2.16	0.00	0.00	0.00	0.12
41	I8_SR1	SilentIntronRegion	0	3.24	0.57	12.20	1.91	0.00	1.71	5.91	8.52	3.45	11.05	0.00	3.19	0.00	0.00	5.57	1.55	1.33	2.11	3.13	0.00	0.38	0.00	0.00	0.38	2.16	0.00	0.00	0.00	0.12
42	E9_Aa	NovelBoundary	0	0.00	0.00	16.89	0.00	0.00	0.00	0.00	10.05	4.66	10.79	0.00	2.65	0.00	0.00	26.51	3.52	2.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00
43	ER9a	ExonRegion	0	36.90	10.98	609.48	59.83	0.00	56.25	78.97	262.64	44.85	306.27	6.46	72.28	8.88	0.00	57.26	20.41	8.52	23.57	20.26	0.00	17.45	3.33	16.22	0.00	50.06	0.00	1.96	1.14	0.96
44	E9_Da	NovelBoundary	0	13.21	0.00	53.47	27.39	0.00	3.76	21.51	62.71	13.86	32.88	0.00	19.37	0.00	0.00	0.00	0.00	1.15	4.50	0.00	0.00	3.89	0.00	0.00	0.00	7.08	0.00	0.00	0.00	0.00
45	E9a_E10a	KnownJunction	0	14.69	8.73	419.27	26.96	0.00	58.78	51.84	175.13	17.05	250.70	16.10	42.17	10.89	0.00	61.19	19.58	6.98	14.51	8.09	0.00	20.34	2.48	13.45	0.00	39.40	0.00	0.00	1.84	0.00
46	I9	Intron	0	26.94	2.49	55.93	13.40	0.00	7.42	25.54	92.18	19.10	45.14	1.11	35.04	0.34	0.09	36.84	5.67	2.17	6.14	3.65	0.00	3.85	0.00	0.94	0.22	8.17	0.00	0.00	0.51	0.00
47	I9_AR1	ActiveIntronRegion	0	27.05	2.50	56.15	13.46	0.00	7.46	25.65	92.55	19.18	45.33	1.12	35.18	0.34	0.09	36.99	5.69	2.18	6.16	3.67	0.00	3.87	0.00	0.94	0.22	8.20	0.00	0.00	0.51	0.00
48	E10_Aa	NovelBoundary	0	22.00	0.00	65.03	31.49	0.00	5.41	25.98	82.91	20.49	34.67	0.00	35.36	0.00	0.00	54.02	0.00	4.84	4.50	8.09	0.00	1.76	0.00	0.00	0.00	11.29	0.00	0.00	0.00	0.00
49	ER10a	ExonRegion	0	42.10	5.87	588.71	113.74	0.00	55.99	103.35	329.84	67.72	509.13	11.29	95.88	11.07	0.11	89.61	20.86	12.23	31.11	35.02	1.12	24.26	0.47	13.24	0.54	82.19	0.00	0.07	0.62	3.66
50	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.38	1.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	E10a_E11a	KnownJunction	0	52.91	3.78	539.48	100.94	0.00	48.04	110.94	360.50	72.99	371.57	8.79	106.56	3.18	0.97	112.02	7.04	7.90	23.12	48.33	3.31	29.60	0.00	26.50	2.87	94.90	0.00	0.00	0.00	6.57
52	ER11a	ExonRegion	0	35.50	13.97	429.30	64.19	1.49	49.94	100.96	285.05	83.94	369.01	12.23	93.24	9.79	2.12	134.88	25.68	6.49	27.33	36.30	1.68	25.18	3.15	11.60	4.69	63.86	2.27	4.48	1.68	3.70
53	IG18	Intergenic	0	5.66	3.15	50.68	11.31	0.00	11.30	25.67	26.93	27.48	74.26	2.90	23.44	0.88	0.15	20.55	3.35	1.43	7.65	7.74	0.82	4.32	0.34	2.00	2.75	12.89	0.25	2.26	0.05	0.70
54	IG18_AR4	ActiveIntergenicRegion	0	2.62	1.57	32.24	15.74	0.00	4.70	10.82	4.94	8.48	52.13	0.29	9.49	0.00	0.00	10.34	1.82	0.00	1.41	7.80	0.00	1.74	0.00	0.44	0.00	10.46	0.00	1.34	0.00	0.00
55	IG18_AR3	ActiveIntergenicRegion	0	2.54	1.51	33.62	12.97	0.00	8.48	12.62	11.87	7.08	82.44	0.00	8.22	0.00	0.00	10.17	2.69	0.00	1.99	4.24	0.00	5.38	0.00	0.00	0.00	14.07	0.00	0.66	0.00	0.72
56	IG18_SR2	SilentIntergenicRegion	0	5.60	1.21	58.21	7.43	0.00	10.61	24.67	33.22	16.51	86.28	0.48	26.62	0.26	0.00	13.32	3.20	1.52	2.63	6.36	0.00	5.23	0.37	1.91	0.66	12.14	0.00	1.30	0.17	0.48
57	IG18_AR2	ActiveIntergenicRegion	0	4.32	1.77	78.66	11.57	0.00	12.28	27.54	35.47	19.17	91.38	0.57	29.53	0.81	0.00	16.29	6.31	1.43	3.49	3.61	0.00	3.21	0.00	3.05	1.24	16.92	0.00	0.88	0.16	1.42
58	IG18_SR1	SilentIntergenicRegion	0	6.59	1.43	66.28	9.80	0.00	8.26	20.48	27.19	23.91	88.53	1.74	17.29	0.40	0.00	16.09	3.11	1.97	3.22	8.12	0.00	3.65	0.00	1.56	0.46	13.15	0.00	0.42	0.00	0.00
59	IG18_AR1	ActiveIntergenicRegion	0	6.48	4.54	42.33	11.85	0.00	12.53	28.67	26.43	36.66	66.47	4.82	24.36	1.29	0.27	26.07	2.83	1.61	11.77	9.46	1.51	4.67	0.52	2.10	4.50	12.14	0.46	3.34	0.00	0.73