Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AC099057.1	Gene	0	0.64	0.39	1.00	1.71	0.00	0.90	0.00	0.00	0.37	1.04	0.14	0.92	0.31	4.59	2.86	5.94	3.03	1.38	0.38	0.49	0.60	0.22	1.30	0.39	3.33	1.03	1.10	2.44	0.00
2	448208	Transcript	0	0.32	0.00	0.55	0.78	0.00	0.24	0.00	0.00	0.16	0.65	0.13	0.59	0.21	2.96	1.27	4.24	1.88	1.22	0.17	0.39	0.32	0.20	0.54	0.00	1.29	0.09	0.63	1.45	0.00
3	441442	Transcript	0	0.00	5.16	1.63	0.57	0.00	3.10	0.00	0.00	0.51	1.12	0.00	1.73	0.90	6.12	1.87	10.64	2.26	0.00	1.51	0.00	2.19	0.00	1.43	3.07	13.89	5.93	1.42	1.28	0.00
4	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	E1_Ab	KnownBoundary	0	109.89	19.39	113.94	200.38	221.94	30.96	114.32	66.49	33.28	86.44	38.28	58.22	78.11	24.90	33.88	25.93	42.75	55.48	80.92	49.21	71.48	61.45	94.56	28.35	31.82	43.43	98.60	66.99	36.31
6	ER1b	ExonRegion	0	0.29	0.00	0.00	0.00	0.00	0.64	0.00	0.00	0.00	0.01	0.00	0.00	0.00	2.06	1.83	2.62	1.77	0.00	0.00	0.00	0.00	0.00	0.63	0.02	1.31	0.80	1.39	1.32	0.00
7	E1_Da	NovelBoundary	0	138.91	191.38	79.25	238.99	177.73	131.10	210.84	126.36	119.80	196.85	53.49	101.99	106.81	70.68	85.91	120.72	41.69	155.53	493.64	118.92	292.08	71.71	133.22	59.34	87.33	101.06	158.58	125.67	61.67
8	E1a_E2a	KnownJunction	0	2.95	0.00	0.00	0.00	0.00	1.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.34	0.00	9.64	9.79	0.00	0.00	0.00	0.00	0.00	2.51	0.00	7.84	3.99	1.89	8.18	0.00
9	E2_Aa	NovelBoundary	0	91.25	123.22	22.85	130.71	84.89	61.16	118.66	36.63	126.59	103.46	27.30	60.24	63.31	32.02	27.11	31.44	21.88	70.89	242.77	68.31	135.13	65.15	63.98	49.83	40.88	35.06	49.60	43.18	35.85
10	ER2a	ExonRegion	0	0.48	1.56	0.81	8.01	0.00	3.08	0.00	0.00	1.23	1.15	0.00	0.63	0.20	8.09	0.80	6.72	6.08	0.00	0.05	0.00	0.56	0.00	3.81	2.61	5.70	2.34	4.03	2.43	0.00
11	E2_Da	NovelBoundary	0	122.57	185.37	24.74	196.06	178.76	93.66	203.28	17.52	63.16	159.18	96.23	144.76	103.14	59.96	34.68	108.32	65.37	154.12	210.40	89.32	212.54	56.93	97.02	54.43	44.63	66.52	140.79	121.49	63.98
12	E2a_E3a	KnownJunction	0	0.00	9.70	1.40	0.00	0.00	6.94	0.00	0.00	1.22	1.92	0.00	3.04	1.40	8.09	0.00	13.92	3.85	0.00	0.00	0.00	3.81	0.00	2.12	6.10	13.75	10.26	1.99	2.07	0.00
13	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	2.75	2.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00
14	Ix	Intron	0	1.96	0.59	0.15	1.31	1.79	1.64	1.48	0.17	1.02	0.79	0.54	1.75	0.35	1.16	0.42	1.92	1.91	4.47	4.68	1.55	3.13	0.33	0.00	1.38	0.65	0.00	0.17	0.60	1.47
15	Ix_SR1	SilentIntronRegion	0	1.97	0.59	0.15	1.32	1.80	1.64	1.48	0.17	1.03	0.79	0.55	1.76	0.36	1.16	0.42	1.92	1.92	4.48	4.70	1.56	3.15	0.33	0.00	1.38	0.65	0.00	0.17	0.60	1.47
16	E3_Aa	NovelBoundary	0	2.83	0.00	0.00	0.00	0.00	0.00	5.84	0.00	1.89	0.00	0.00	1.30	0.00	0.00	0.00	3.21	1.04	9.25	0.00	4.13	4.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER3a	ExonRegion	0	0.00	5.80	1.95	1.72	0.00	2.35	0.00	0.00	0.30	1.44	0.00	2.15	1.30	5.92	5.60	10.79	2.92	0.00	4.53	0.00	2.77	0.00	2.18	3.10	14.42	7.53	2.26	1.77	0.00
18	E3_Da	NovelBoundary	0	5.43	0.00	0.00	27.39	0.00	1.76	2.92	0.00	2.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E3a_E4a	KnownJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.34	0.00	7.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	13.49	0.00	0.00	0.00	0.00
20	Ix	Intron	0	2.71	2.17	0.42	2.42	2.47	2.78	4.59	0.62	2.03	2.19	0.60	1.82	2.56	1.71	2.09	2.33	1.76	8.12	15.89	3.46	4.93	0.30	0.15	1.63	0.84	0.13	1.70	0.82	0.62
21	Ix_SR1	SilentIntronRegion	0	2.78	2.23	0.43	2.48	2.53	2.79	4.66	0.64	2.08	2.25	0.62	1.83	2.63	1.76	2.15	2.33	1.81	8.29	16.23	3.54	5.02	0.31	0.16	1.67	0.86	0.14	1.74	0.81	0.63
22	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	4.12	2.02	0.00	0.80	0.00	0.00	2.12	0.00	0.00	0.00	2.53	0.00	2.73	4.53	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	3.26	0.00
23	Ix_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	2.02	0.00	0.00	0.00	0.00	0.82	0.00	0.00	0.00	2.53	0.00	0.00	0.75	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E4_Aa	NovelBoundary	0	68.25	36.55	17.89	42.92	19.45	85.67	276.46	21.40	31.79	109.37	33.79	62.86	71.43	33.32	40.06	40.70	25.59	195.60	210.18	52.18	108.98	26.79	110.91	15.43	48.80	144.41	50.94	92.65	31.63
25	ER4a	ExonRegion	0	0.97	0.00	1.46	0.00	0.00	0.40	0.00	0.00	0.36	0.91	0.00	0.78	0.04	2.16	3.93	2.87	3.03	0.29	0.03	0.40	0.52	0.00	0.38	0.00	2.53	1.11	1.32	1.03	0.00
26	E4_Da	KnownBoundary	0	14.45	4.85	22.40	58.24	42.15	4.95	14.07	2.14	4.78	20.33	1.61	5.75	4.46	4.83	9.97	15.22	6.87	13.87	7.87	15.05	9.43	11.13	19.40	3.05	8.56	16.74	39.46	4.22	6.37
27	ER4b	ExonRegion	0	0.96	0.00	1.64	2.34	0.00	0.72	0.00	0.00	0.48	1.95	0.39	1.76	0.64	7.19	3.82	9.95	3.62	3.65	0.52	1.17	0.95	0.59	1.63	0.00	3.86	0.26	0.00	4.34	0.00
28	IG33_SR1	SilentIntergenicRegion	0	9.23	5.28	10.04	17.28	5.23	4.85	17.30	6.63	4.48	9.26	7.41	2.04	1.95	21.33	24.40	32.03	9.90	6.57	10.48	13.25	9.74	9.93	9.10	3.16	19.55	28.15	14.92	20.01	6.01
29	IG33_AR1	ActiveIntergenicRegion	0	3.05	6.65	10.46	10.56	0.97	6.09	4.26	0.71	7.02	13.25	6.00	3.85	3.29	22.92	32.72	32.95	20.01	5.93	4.54	6.76	4.32	6.51	11.22	4.49	25.46	9.77	28.41	16.82	3.10