Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF860	Gene	0	34.27	60.51	64.67	118.56	5.42	17.64	96.63	13.44	25.31	80.05	63.04	56.99	40.99	90.66	90.52	45.54	111.90	125.60	129.62	142.96	39.15	6.73	54.46	7.60	129.94	69.81	89.81	136.49	22.90
2	489408	Transcript	0	8.40	2.16	9.01	13.90	0.00	0.86	20.32	2.13	2.31	13.05	7.21	6.36	4.30	11.87	6.08	3.64	8.60	23.90	15.80	18.68	3.02	2.74	8.99	0.00	17.88	14.19	3.31	14.75	0.37
3	360311	Transcript	0	20.94	34.38	38.63	87.54	3.06	11.49	57.91	7.54	14.26	48.22	39.43	36.78	26.92	56.67	59.99	26.35	65.50	75.29	76.59	87.10	25.10	6.63	36.00	4.32	75.40	49.24	52.04	100.77	13.99
4	ER1a	ExonRegion	0	4.82	0.00	3.09	42.05	0.00	1.72	17.13	2.30	2.25	3.61	0.60	5.88	4.87	4.99	16.80	2.53	5.51	19.10	2.26	11.95	1.78	3.15	14.01	0.00	4.65	8.64	4.12	13.04	0.00
5	ER1b	ExonRegion	0	21.18	16.78	71.69	154.54	1.95	7.00	86.05	12.23	7.82	34.67	30.26	23.07	17.24	41.12	26.87	35.92	64.22	69.76	35.11	65.92	15.47	7.17	51.63	1.71	37.13	65.11	46.15	124.02	18.20
6	E1_Da	NovelBoundary	0	5.54	0.00	4.41	21.57	0.00	1.88	5.26	2.19	0.00	1.64	4.11	1.63	1.97	4.28	0.00	2.75	7.02	4.62	8.09	3.31	1.64	0.00	0.00	0.00	1.48	2.19	2.14	2.29	1.58
7	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.69	0.00	1.25	0.00	0.00	2.53	0.00	1.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1a_E3a	KnownJunction	1	7.96	0.00	12.46	51.33	0.00	3.45	13.67	2.14	0.00	10.71	9.74	11.96	8.57	20.03	18.14	3.82	12.97	18.49	8.09	19.27	6.26	6.66	16.01	0.00	9.40	28.45	2.24	60.93	3.30
9	Ix	Intron	0	11.97	6.72	5.54	8.13	0.14	2.16	10.15	1.87	3.15	15.00	5.40	4.09	1.04	10.23	1.55	5.73	12.33	20.73	16.27	15.72	5.64	0.52	1.47	0.31	9.60	3.02	1.39	12.05	0.86
10	Ix_SR1	SilentIntronRegion	0	9.63	2.09	2.94	0.00	3.23	1.79	5.60	2.44	0.00	7.46	0.00	0.80	1.72	5.65	0.00	5.95	5.39	18.11	7.82	16.13	1.32	1.19	0.00	0.00	7.54	7.43	2.02	5.40	0.89
11	Ix_AR1	ActiveIntronRegion	0	11.73	4.75	6.13	4.97	0.00	2.50	10.79	2.23	2.14	14.03	6.60	3.37	1.40	9.64	2.15	6.68	10.54	17.26	18.89	16.52	7.61	0.16	1.41	0.37	7.55	0.66	1.80	9.60	0.81
12	Ix_SR2	SilentIntronRegion	0	12.29	8.14	5.42	10.45	0.00	2.00	10.14	1.64	3.92	16.08	5.14	4.73	0.79	10.89	1.34	5.22	13.82	22.83	15.47	15.28	4.89	0.68	1.61	0.30	10.88	3.99	1.12	13.87	0.88
13	E2_Aa	NovelBoundary	0	31.68	9.70	14.48	19.41	0.00	4.87	33.01	4.93	3.05	23.53	20.18	8.28	9.74	19.74	0.00	18.59	29.26	29.28	56.65	47.80	1.89	5.64	0.00	0.00	30.99	10.86	4.17	26.96	2.05
14	ER2a	ExonRegion	0	16.79	4.87	21.44	13.54	0.00	1.73	34.84	4.17	5.76	27.49	20.77	11.24	4.41	27.24	7.54	8.20	25.61	34.10	28.55	44.24	8.62	3.82	7.29	0.00	31.94	22.38	4.94	28.98	1.47
15	E2_Da	NovelBoundary	0	23.95	4.07	4.56	10.14	0.00	3.76	23.80	3.98	6.55	17.30	6.42	7.41	4.87	11.70	0.00	0.00	14.97	19.26	16.18	20.51	5.82	0.00	0.00	2.57	15.76	0.00	0.00	16.98	0.00
16	E2a_E3a	KnownJunction	0	11.97	3.78	11.51	0.00	0.00	0.00	26.60	2.04	0.00	21.09	7.47	5.81	7.93	14.25	0.00	3.82	3.29	37.76	32.37	18.52	1.68	3.99	14.68	0.00	34.93	25.75	4.17	16.98	0.00
17	E3_Aa	NovelBoundary	0	23.54	13.38	26.26	37.96	0.00	1.84	21.11	2.34	5.54	28.08	1.27	8.80	0.00	20.96	8.37	9.79	40.70	18.49	24.28	32.17	1.60	0.00	2.41	0.00	21.22	11.42	0.00	44.17	6.87
18	ER3a	ExonRegion	0	55.28	32.47	87.22	113.51	3.33	13.53	84.46	24.81	13.28	77.33	43.76	55.10	31.64	127.59	57.86	39.61	126.65	143.93	81.41	120.45	21.00	9.74	69.58	4.68	119.69	99.81	41.56	167.93	20.37
19	E3_Da	KnownBoundary	0	61.23	25.89	131.80	155.95	13.41	17.76	73.75	10.85	20.13	82.93	41.82	34.31	41.56	106.35	66.57	52.78	99.76	153.73	113.29	132.07	23.54	17.55	68.41	5.26	107.29	95.66	22.51	138.57	8.06
20	ER3b	ExonRegion	0	33.92	68.77	64.80	123.76	6.12	19.53	102.15	12.95	28.52	85.73	69.12	61.60	45.28	93.30	101.83	48.88	118.04	132.08	145.09	154.93	43.94	6.60	56.00	8.63	141.40	70.02	101.83	140.61	24.68