Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	EAF1	Gene	0	115.95	189.53	188.12	63.55	153.71	151.07	137.21	96.23	114.35	203.81	193.32	273.60	144.95	149.50	69.98	95.21	95.22	130.08	163.62	101.44	185.56	123.23	115.95	92.91	93.96	101.33	138.33	80.37	80.06
2	396842	Transcript	0	126.87	87.52	146.49	43.73	101.99	124.91	101.23	89.09	35.66	200.44	155.64	197.19	96.64	123.35	24.39	89.11	72.06	90.08	85.86	89.23	115.40	121.61	81.56	37.77	80.97	111.61	71.13	54.70	59.43
3	432764	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	449565	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	494875	Transcript	0	2.12	1.32	3.17	0.71	2.19	1.37	1.38	1.21	0.40	2.29	1.83	4.59	0.95	2.05	0.27	1.14	1.98	2.36	1.49	1.37	1.67	1.69	1.57	1.36	0.99	1.46	1.54	1.07	0.65
6	ER1a	ExonRegion	0	0.25	1.39	0.01	0.00	0.00	0.05	0.00	0.93	0.28	0.80	0.30	0.46	0.00	0.00	1.38	1.32	0.00	0.00	0.00	0.00	0.00	0.77	0.45	0.00	0.00	0.39	0.00	0.00	0.50
7	E1_Ab	KnownBoundary	0	4.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.06	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	15.16	2.24	10.18	4.10	78.73	12.37	6.78	3.86	0.82	31.69	7.69	10.20	5.77	4.71	1.09	26.85	3.30	11.92	1.10	7.06	18.20	24.58	16.89	0.31	3.21	8.78	6.48	2.39	6.38
9	E1_Ac	KnownBoundary	0	26.31	4.85	24.37	9.92	219.14	27.28	21.23	9.46	1.55	79.85	24.14	20.90	12.64	10.97	7.57	64.26	7.07	32.36	8.09	18.61	51.18	62.42	46.74	3.05	7.54	26.91	19.93	5.71	13.80
10	ER1c	ExonRegion	0	81.34	48.50	128.32	57.14	108.03	78.43	78.00	41.92	6.87	102.15	62.17	81.57	43.04	60.45	18.18	75.06	35.45	81.13	36.53	62.43	69.55	83.80	80.14	16.03	23.56	61.73	48.95	39.71	35.11
11	E1_Da	NovelBoundary	0	0.00	4.65	0.00	0.00	0.00	0.00	0.00	4.48	0.00	0.00	0.00	1.84	1.62	1.95	7.57	0.00	0.00	0.00	0.00	0.00	3.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E2a	KnownJunction	0	75.86	109.26	130.68	40.33	121.43	97.26	76.21	74.25	15.38	124.55	211.89	192.44	59.64	135.75	27.71	64.64	77.34	126.63	105.20	76.25	63.05	99.37	140.90	40.73	46.94	121.83	331.83	104.06	80.09
13	I1_SR1	SilentIntronRegion	0	1.82	1.18	1.06	5.26	0.00	1.01	0.74	0.68	0.71	3.08	0.44	1.70	0.83	2.80	0.85	0.46	1.83	2.15	0.59	0.00	2.69	0.33	0.33	0.39	0.79	0.29	0.00	0.00	0.00
14	E2_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	1.50	0.00	0.00	1.67	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	0	127.59	108.19	311.64	116.62	324.17	158.16	155.66	104.34	39.15	236.13	230.54	284.08	130.79	190.74	29.89	93.29	108.57	135.40	123.20	115.36	133.04	136.27	130.23	49.88	94.23	163.55	132.58	99.62	89.85
16	E2_Da	NovelBoundary	0	5.49	7.66	0.00	0.00	0.00	5.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.19	0.00	0.00	0.00	0.00	23.83	3.97	0.00	0.00	1.82	0.00	0.00	0.00	0.00	2.11	1.29
17	E2a_E3a	KnownJunction	0	209.40	110.04	359.27	91.45	229.60	227.83	229.15	123.07	52.96	366.02	201.70	349.63	172.02	197.13	18.14	214.81	126.10	177.36	145.66	138.44	150.49	170.94	120.32	37.32	117.71	200.58	88.61	104.42	98.15
18	E2a_E4a	KnownJunction	0	19.47	0.00	30.97	9.27	71.48	18.65	5.84	9.06	0.00	5.43	0.00	9.13	7.48	12.08	9.97	0.00	7.34	18.49	16.18	16.21	9.19	8.90	2.46	0.00	0.00	3.86	12.13	4.36	0.00
19	I2	Intron	0	3.27	1.60	2.81	0.28	0.57	4.41	2.20	1.08	1.51	4.35	1.86	2.89	1.17	2.16	2.05	3.80	3.85	6.04	4.50	1.48	3.40	0.42	0.57	2.19	1.79	0.86	0.57	1.34	0.24
20	I2_AR1	ActiveIntronRegion	0	3.09	3.45	2.89	0.00	1.41	3.96	2.32	1.06	1.62	3.74	3.09	0.71	1.31	1.05	0.00	1.23	2.15	2.78	0.92	1.37	2.88	0.52	1.04	1.86	0.00	2.26	0.00	0.00	0.39
21	I2_SR1	SilentIntronRegion	0	3.30	1.31	2.80	0.33	0.44	4.49	2.19	1.09	1.50	4.45	1.67	3.24	1.15	2.34	2.38	4.21	4.13	6.56	5.07	1.50	3.49	0.41	0.49	2.24	2.07	0.64	0.66	1.55	0.21
22	E3_Aa	NovelBoundary	0	2.36	4.75	0.97	0.00	0.00	4.83	0.00	0.00	3.87	3.16	7.24	6.48	0.00	5.27	0.00	10.56	6.21	4.62	0.00	11.50	7.22	0.00	1.87	0.00	0.00	0.00	3.78	0.00	1.62
23	ER3a	ExonRegion	0	209.47	158.61	191.74	87.06	153.77	203.75	150.95	178.01	43.14	279.92	234.35	306.66	127.09	217.87	35.20	121.33	110.35	154.67	151.37	137.42	207.21	223.05	148.88	64.77	131.76	144.42	106.95	91.03	76.09
24	E3_Da	NovelBoundary	0	2.83	0.00	5.38	0.00	7.07	9.48	2.46	0.00	1.55	11.34	2.78	4.28	0.00	4.36	0.00	0.00	3.87	9.63	0.00	11.66	7.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05
25	E3a_E4a	KnownJunction	0	215.24	158.80	179.54	40.12	121.58	191.57	124.73	143.43	53.44	353.04	340.26	324.66	180.18	200.54	44.85	108.09	122.18	111.99	129.25	167.47	219.28	212.70	136.32	74.59	153.93	207.92	153.37	74.81	119.71
26	I3	Intron	0	1.52	5.08	0.66	0.57	3.08	6.08	3.34	1.45	5.66	4.22	1.69	4.33	2.40	1.21	1.23	3.22	4.60	4.16	5.80	3.36	6.76	0.00	0.29	1.19	0.45	1.12	1.45	0.64	1.42
27	I3_SR1	SilentIntronRegion	0	1.53	5.09	0.66	0.57	3.09	6.09	3.35	1.46	5.67	4.22	1.69	4.34	2.40	1.21	1.23	3.23	4.60	4.16	5.81	3.36	6.76	0.00	0.29	1.19	0.45	1.12	1.45	0.64	1.42
28	I3	Intron	0	1.28	4.32	1.99	1.07	0.00	3.90	4.81	0.55	2.26	4.09	0.89	2.03	0.39	1.42	2.75	2.01	1.11	4.12	5.72	2.35	2.98	0.81	0.27	1.28	1.28	0.47	0.55	1.46	0.30
29	I3_SR1	SilentIntronRegion	0	1.29	4.35	2.01	1.08	0.00	3.92	4.84	0.55	2.27	4.11	0.89	2.04	0.39	1.43	2.77	2.02	1.12	4.14	5.75	2.36	3.00	0.81	0.27	1.29	1.29	0.47	0.55	1.47	0.30
30	E4_Aa	NovelBoundary	0	19.52	3.68	5.90	0.00	0.00	8.48	10.93	2.19	4.96	11.82	14.77	6.48	3.95	13.63	0.00	0.00	22.46	4.62	8.09	0.00	2.05	8.61	0.00	2.81	5.72	3.91	12.42	6.60	5.28
31	ER4a	ExonRegion	0	189.55	140.43	245.60	60.03	166.43	161.69	136.62	145.59	40.53	269.19	212.24	391.52	142.69	203.78	33.60	115.72	131.69	189.06	157.53	129.91	178.74	179.02	155.23	42.66	90.36	143.66	107.49	109.49	94.03
32	E4a_E5a	KnownJunction	0	188.05	144.65	279.02	81.75	120.99	177.03	103.84	145.02	35.29	316.41	236.53	319.72	93.94	196.64	68.17	139.38	125.42	216.92	161.85	134.39	183.59	178.23	136.96	30.21	83.65	145.14	124.34	106.94	111.02
33	I4_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E5_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	1.40	0.00	0.00	0.00	6.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.02	3.37
35	ER5a	ExonRegion	0	134.46	117.58	218.50	63.94	121.58	106.30	103.88	132.80	23.57	167.09	141.23	270.30	88.24	145.98	26.85	93.55	85.16	157.15	123.61	110.43	121.72	150.61	121.33	34.28	69.70	126.20	70.31	99.02	56.02
36	E5_Da	NovelBoundary	0	3.01	4.85	4.48	0.00	6.04	1.73	0.00	0.00	2.56	0.00	0.00	4.70	1.53	1.11	0.00	3.60	7.09	4.62	16.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.48	1.80	0.00
37	E5a_E6b	KnownJunction	0	129.00	93.17	219.55	59.32	201.31	133.94	109.62	103.36	32.74	143.52	150.99	332.92	71.49	168.06	31.29	95.32	80.72	138.96	105.20	107.59	137.86	108.42	138.44	56.17	86.45	128.40	144.32	81.96	35.52
38	I5	Intron	0	1.73	2.43	1.15	0.87	1.19	3.17	1.63	0.52	1.70	3.92	1.40	2.13	1.37	1.36	3.50	1.78	3.99	2.04	2.07	1.08	2.48	0.58	0.29	2.09	0.64	0.70	0.89	1.45	0.89
39	I5_SR1	SilentIntronRegion	0	1.74	2.43	1.15	0.87	1.19	3.18	1.63	0.52	1.71	3.93	1.40	2.13	1.37	1.36	3.50	1.78	4.00	2.05	2.07	1.09	2.49	0.59	0.29	2.09	0.64	0.70	0.89	1.45	0.89
40	E6_Aa	NovelBoundary	0	2.18	4.27	1.54	0.00	0.00	1.46	0.00	0.00	0.00	4.07	4.84	0.00	0.00	0.89	0.00	6.88	1.26	0.00	0.00	0.00	3.81	0.00	0.00	5.20	0.00	0.00	0.00	0.00	1.65
41	ER6a	ExonRegion	0	4.23	2.64	6.35	1.43	4.37	2.75	2.75	2.42	0.79	4.58	3.66	9.17	1.90	4.09	0.55	2.28	3.96	4.73	2.98	2.74	3.34	3.39	3.13	2.73	1.99	2.91	3.08	2.15	1.31
42	E6_Ab	KnownBoundary	0	4.54	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	3.24	0.00	1.54	0.00	0.00	0.00	0.00	6.98	4.62	0.00	0.00	0.00	0.00	2.46	3.05	1.55	0.00	0.00	0.00	0.00
43	ER6b	ExonRegion	0	124.13	154.01	243.08	65.50	142.70	164.89	153.92	110.23	37.10	211.48	208.72	339.90	119.45	197.80	33.26	100.77	116.03	159.01	159.25	118.32	208.84	116.97	141.22	56.52	108.65	117.48	137.05	109.16	58.60
44	E6_Da	KnownBoundary	0	115.79	143.49	145.05	84.55	188.64	157.46	135.20	69.87	47.87	185.47	192.53	221.56	115.18	151.73	39.66	157.36	93.10	175.95	193.77	102.38	208.73	96.31	97.37	59.64	90.89	50.42	121.36	69.01	55.79
45	ER6c	ExonRegion	0	132.55	193.45	181.78	88.34	253.52	153.22	140.78	75.53	46.73	203.53	250.41	281.01	137.20	175.60	44.20	149.45	102.99	139.85	206.11	101.41	209.33	96.76	108.40	55.17	127.75	71.02	149.25	77.80	59.27
46	E6_Db	KnownBoundary	0	119.50	226.67	140.52	122.73	334.68	150.67	159.51	64.35	46.71	186.79	287.81	262.68	120.28	155.83	79.33	136.86	79.28	175.31	210.40	118.59	207.53	91.06	113.77	44.74	125.82	63.68	165.39	69.42	48.63
47	E6b_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
48	ER6d	ExonRegion	0	158.33	215.86	226.06	76.11	186.40	199.38	188.38	119.27	80.91	234.85	283.26	360.22	147.77	195.07	69.85	118.35	128.86	143.56	199.94	128.90	256.69	136.05	146.14	102.40	118.55	107.56	178.95	83.97	80.80
49	E6_Ac	KnownBoundary	0	161.56	350.28	161.80	90.59	270.72	259.02	265.02	83.91	291.61	305.94	323.15	400.96	205.52	162.16	103.25	113.98	156.55	155.27	380.35	134.97	320.64	130.29	148.78	143.80	113.47	113.77	286.85	86.09	109.87
50	ER6e	ExonRegion	0	129.55	223.77	214.94	74.28	209.07	218.08	207.19	112.48	146.65	269.20	269.01	350.01	169.46	192.00	63.05	113.20	134.12	157.33	218.58	125.90	258.83	137.88	152.37	122.39	123.47	100.11	166.36	78.59	101.34
51	E6_Dc	KnownBoundary	0	172.95	199.33	260.16	92.32	161.67	173.96	216.44	156.51	219.08	253.85	279.93	287.52	144.00	204.39	71.16	143.05	93.80	140.25	379.90	108.50	214.55	200.25	154.05	133.81	130.02	74.11	134.23	98.94	83.56
52	ER6f	ExonRegion	0	96.39	242.64	179.84	61.49	152.79	150.59	132.73	87.95	196.74	215.48	182.87	266.54	188.18	138.62	105.08	92.28	89.90	131.85	189.09	96.11	190.81	123.20	108.37	129.99	100.23	103.89	160.12	85.93	99.66
53	ER6g	ExonRegion	0	0.00	8.76	1.87	0.00	4.98	1.37	1.34	0.00	28.46	2.41	1.59	4.54	3.90	1.21	22.40	0.00	1.67	6.37	3.02	2.81	0.00	0.60	1.81	12.19	1.43	4.71	6.72	3.26	2.68