Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AC074117.3	Gene	0	44.82	23.38	21.49	31.61	28.25	33.39	11.18	15.91	30.24	28.71	14.87	27.34	26.23	28.83	49.45	49.38	50.85	62.93	31.18	10.89	26.74	13.58	44.58	29.94	33.37	24.53	48.67	40.45	19.99
2	447070	Transcript	0	24.14	11.14	12.52	14.24	22.73	15.08	6.82	9.00	15.36	14.73	6.84	13.49	13.74	14.37	29.15	27.50	24.64	33.61	17.02	5.41	12.06	8.40	23.91	15.14	17.19	12.96	23.27	22.15	10.95
3	453289	Transcript	0	7.66	0.00	4.37	2.69	7.62	3.56	0.08	2.55	3.07	5.54	2.31	3.99	2.47	0.78	17.26	3.77	4.64	4.96	0.00	0.06	1.69	4.23	4.32	1.98	4.03	0.96	1.64	1.20	1.75
4	412749	Transcript	0	0.55	0.00	2.04	0.92	10.65	0.36	1.81	7.00	1.07	0.19	0.00	0.79	1.48	0.36	2.48	4.32	2.54	0.25	0.82	2.53	0.55	0.23	0.00	0.55	3.45	3.26	0.23	2.09	2.11
5	ER1a	ExonRegion	0	6.98	2.71	3.77	1.20	8.52	3.93	4.07	4.97	2.77	2.37	1.11	2.06	1.73	3.30	5.73	9.56	10.04	5.44	3.04	1.94	3.22	3.10	0.62	1.98	3.62	3.43	1.83	5.72	5.38
6	E1_Da	NovelBoundary	0	2.48	4.46	11.06	17.26	0.00	7.60	0.00	11.74	4.63	13.70	8.29	7.47	3.44	6.12	0.00	17.06	7.18	13.87	8.09	0.00	7.10	1.85	0.00	2.57	1.93	5.79	2.44	8.22	0.00
7	E1a_E3a	KnownJunction	0	0.00	0.00	4.06	0.00	28.59	0.00	2.40	0.00	0.00	2.00	0.00	2.50	0.00	1.13	9.97	3.06	0.00	0.00	8.09	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1a_E4a	NovelJunction	0	0.00	0.00	1.02	0.00	0.00	1.57	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	1.68
9	I1	Intron	0	8.71	5.62	3.71	18.55	21.66	7.11	2.98	1.36	2.69	5.34	1.32	3.65	0.96	5.19	25.49	15.33	8.83	13.76	9.45	2.04	3.69	3.33	4.68	3.97	5.81	8.71	6.77	13.25	9.67
10	I1_AR1	ActiveIntronRegion	0	8.84	5.70	3.76	18.82	21.98	7.22	3.02	1.38	2.73	5.41	1.34	3.70	0.97	5.27	25.86	15.56	8.95	13.97	9.55	2.07	3.74	3.38	4.75	4.03	5.90	8.84	6.87	13.45	9.81
11	E2_Aa	NovelBoundary	0	13.68	3.59	19.38	9.27	37.28	1.61	2.92	0.00	1.55	10.19	1.17	3.43	4.52	8.13	9.97	17.98	14.52	0.00	16.18	3.47	3.29	0.00	2.51	0.00	1.93	5.92	4.77	4.99	16.87
12	ER2a	ExonRegion	0	7.66	0.00	4.37	2.69	7.62	3.56	0.08	2.55	3.07	5.54	2.31	3.99	2.47	0.78	17.26	3.77	4.64	4.96	0.00	0.06	1.69	4.23	4.32	1.98	4.03	0.96	1.64	1.20	1.75
13	E2_Ab	KnownBoundary	0	24.71	0.00	9.84	16.82	13.56	11.32	0.00	9.16	6.67	10.59	5.44	8.16	1.40	5.05	41.46	7.11	13.60	4.50	0.00	0.00	7.30	13.56	4.83	5.62	15.34	5.71	6.41	2.16	10.40
14	ER2b	ExonRegion	0	18.69	6.95	6.17	12.66	15.57	9.11	3.92	6.90	5.97	7.05	5.31	13.24	3.53	9.72	27.95	9.17	11.03	16.09	12.53	11.76	7.72	3.31	4.17	5.40	10.72	8.80	6.08	5.83	12.61
15	E2_Da	NovelBoundary	0	24.83	12.41	17.09	59.96	40.38	19.80	20.54	8.41	13.34	30.84	11.61	23.10	12.80	29.42	91.69	92.41	28.65	23.12	24.28	6.62	21.78	11.28	7.29	10.47	38.83	35.36	15.85	51.13	24.53
16	E2a_E3a	KnownJunction	0	2.65	12.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.83	0.00	1.14	0.00	4.63	0.00	0.00	3.71	0.00	0.00	0.00	5.41	0.00	0.00	0.00	0.00	0.00	4.62	1.75	5.41
17	I2	Intron	0	18.00	0.00	0.00	5.01	10.24	5.76	1.41	6.43	1.95	7.06	4.16	3.02	1.82	9.82	6.44	8.70	1.04	14.80	8.93	3.89	6.98	5.04	3.79	1.50	7.99	5.49	10.29	17.08	0.94
18	I2_AR1	ActiveIntronRegion	0	18.25	0.00	0.00	5.08	10.38	5.84	1.43	6.52	1.98	7.16	4.21	3.06	1.84	9.94	6.53	8.82	1.06	15.01	9.05	3.94	7.07	5.11	3.84	1.52	8.10	5.57	10.43	17.27	0.95
19	E3_Aa	NovelBoundary	0	37.28	32.87	19.66	45.94	27.71	46.42	16.65	8.86	13.67	35.11	12.84	28.04	9.90	25.68	25.91	42.30	44.41	27.74	56.42	29.61	43.08	6.56	6.99	25.30	27.13	18.62	39.26	33.65	6.44
20	ER3a	ExonRegion	0	30.23	17.22	21.56	33.79	53.96	43.76	15.45	26.57	13.13	30.71	17.96	27.11	8.67	27.04	12.62	31.62	53.70	22.41	44.45	8.20	29.50	12.30	11.86	19.70	25.58	31.93	51.11	25.75	23.40
21	E3_Da	KnownBoundary	0	38.05	0.00	19.83	28.26	28.74	74.86	9.90	16.37	28.20	30.40	35.56	28.55	13.15	21.91	50.03	33.66	62.06	13.87	64.74	11.50	33.17	8.85	13.54	10.95	22.77	13.86	31.76	26.69	17.63
22	E3a_E4a	KnownJunction	0	0.00	0.00	2.69	0.00	14.74	0.00	0.00	11.74	1.52	0.00	0.00	0.00	1.46	0.00	0.00	3.82	2.21	0.00	0.00	2.98	0.00	0.00	0.00	0.00	3.49	1.63	0.00	0.00	1.58
23	ER3b	ExonRegion	0	28.01	42.67	22.29	56.75	64.45	72.11	14.47	6.60	34.38	35.43	26.29	46.42	18.30	44.00	38.25	45.73	98.26	35.31	56.16	13.85	59.93	7.30	10.54	29.37	28.22	11.81	65.34	17.81	14.00
24	E3_Db	KnownBoundary	0	44.24	9.11	21.65	56.51	55.56	68.37	27.35	11.00	38.34	46.42	42.68	50.21	12.64	43.98	44.25	42.92	107.71	60.88	80.92	7.36	80.50	6.86	20.98	34.09	21.37	5.75	42.09	18.56	27.93
25	ER3c	ExonRegion	0	65.43	30.72	29.73	41.52	31.08	41.31	13.98	22.04	43.30	39.84	19.42	35.91	39.48	38.68	71.76	69.88	63.90	95.40	39.94	14.30	32.96	19.62	71.11	43.43	47.96	35.44	67.98	60.72	27.46
26	E3_Dc	NovelBoundary	0	7.14	3.97	4.29	0.00	5.45	0.00	0.00	0.00	1.67	3.44	0.00	0.00	2.96	1.82	0.00	3.06	0.83	0.00	0.00	0.00	3.05	0.00	2.02	2.75	4.66	0.00	0.00	0.00	3.86
27	Ix	Intron	0	5.56	2.78	0.00	0.00	4.22	2.97	0.87	3.18	2.43	2.50	0.00	4.53	4.21	3.72	10.35	2.14	6.45	0.00	2.76	1.19	2.47	1.56	0.78	7.44	4.32	5.43	0.00	4.23	2.02
28	Ix_SR1	SilentIntronRegion	0	5.64	2.83	0.00	0.00	4.29	3.02	0.89	3.24	2.47	2.53	0.00	4.61	4.28	3.77	10.53	2.18	6.56	0.00	2.81	1.21	2.51	1.59	0.80	7.57	4.40	5.53	0.00	4.30	2.06
29	E4_Aa	NovelBoundary	0	87.59	17.26	11.66	8.20	7.22	46.77	12.99	73.16	21.59	21.85	7.56	10.72	13.72	57.45	17.54	99.83	78.15	37.24	24.28	25.22	19.17	8.85	2.51	31.28	27.35	14.25	2.24	25.88	17.46
30	ER4a	ExonRegion	0	1.10	0.00	1.39	1.84	6.56	0.71	3.62	2.26	0.61	0.37	0.00	1.58	1.49	0.72	4.95	4.81	2.87	0.49	1.64	2.08	1.10	0.46	0.00	1.10	3.42	4.89	0.47	4.18	2.63