Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C2orf44	Gene	0	58.46	60.86	47.20	86.77	87.99	97.37	52.30	72.54	40.54	61.11	85.92	61.87	60.56	56.74	39.53	53.35	72.58	53.38	91.44	52.25	61.27	27.80	72.37	40.73	45.42	55.49	72.69	28.72	37.86
2	443232	Transcript	0	0.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
3	406895	Transcript	0	0.95	6.30	1.32	3.25	3.32	1.37	1.23	1.43	5.34	2.04	0.86	0.82	0.81	1.43	0.00	2.36	5.59	0.45	0.50	3.94	3.49	0.00	4.18	0.00	1.03	4.09	0.00	1.60	1.09
4	295148	Transcript	0	59.55	77.29	53.94	90.33	128.59	134.59	48.21	67.13	30.64	79.30	99.19	56.45	50.43	57.94	35.48	54.76	66.99	44.87	121.40	64.07	67.91	23.11	63.83	47.53	65.55	49.86	94.94	27.21	34.16
5	ER1a	ExonRegion	0	0.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.49	5.54	6.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.56	0.00	0.00	4.42	2.47	0.00	0.00	0.00	1.40	1.66	3.72	2.43	0.00	2.52	0.00
7	E2_Aa	NovelBoundary	1	27.07	9.70	5.43	64.06	77.66	11.47	5.84	7.61	0.00	15.70	34.86	7.65	1.97	12.32	0.00	25.47	14.36	19.52	8.09	20.34	2.05	12.25	21.82	0.00	5.72	26.09	15.01	35.54	8.62
8	E2_Ab	NovelBoundary	0	55.51	26.56	16.22	171.26	330.55	81.07	27.86	76.04	14.34	44.26	126.25	52.86	22.61	57.27	0.00	93.48	34.80	18.49	24.28	51.03	39.63	21.68	118.79	17.83	44.14	118.40	86.32	38.15	21.99
9	ER2a	ExonRegion	0	1.91	0.00	1.12	6.50	6.64	2.75	2.46	2.86	4.37	0.00	0.26	1.65	0.00	1.11	0.00	1.97	8.68	0.91	1.01	3.75	3.49	0.00	1.61	0.00	2.06	6.29	0.00	0.91	0.89
10	ER2b	ExonRegion	0	14.29	12.89	30.50	60.75	45.73	17.17	9.36	12.79	9.05	14.47	23.50	26.16	6.69	13.98	20.54	20.83	25.66	19.38	77.17	17.58	14.48	7.95	25.08	3.09	16.35	51.34	9.44	20.56	9.19
11	E2a_E3a	KnownJunction	0	23.24	21.04	112.74	105.26	59.54	26.13	19.00	21.15	13.40	25.80	37.20	74.55	25.86	36.16	18.54	33.05	131.79	37.76	137.57	22.08	17.33	16.24	37.13	5.20	22.77	88.40	22.76	30.64	23.47
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	56.79	27.62	49.73	66.06	55.04	65.69	39.49	71.71	10.38	41.58	77.40	55.39	29.09	54.99	23.95	44.80	75.87	48.41	53.92	41.49	39.54	25.42	76.80	13.45	35.16	71.50	45.26	31.38	24.92
14	E3_Da	KnownBoundary	0	15.69	45.18	57.73	45.94	12.82	156.50	60.59	46.03	15.62	50.45	64.85	43.28	39.58	29.07	26.71	44.98	84.18	47.26	48.55	15.22	53.75	23.53	91.26	0.00	42.47	52.87	11.63	29.61	26.18
15	ER3b	ExonRegion	0	72.53	75.14	39.56	107.40	100.34	129.52	60.95	69.05	32.40	76.60	115.81	71.29	58.66	71.96	35.74	67.13	83.17	65.87	118.40	66.10	79.27	28.16	86.61	41.87	49.16	47.10	90.58	27.59	37.74
16	E3_Db	NovelBoundary	0	2.18	3.68	1.22	0.00	0.00	5.56	0.00	0.00	1.46	2.04	0.00	0.00	0.00	3.50	0.00	3.60	4.52	0.00	24.28	2.98	7.66	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00
17	E3b_E4a	KnownJunction	0	56.57	85.61	47.81	141.49	193.65	169.74	64.19	68.38	36.63	97.07	130.65	78.01	66.62	77.68	42.06	58.90	89.23	47.01	177.81	83.11	74.93	24.50	63.78	52.70	89.11	45.66	156.70	25.34	32.78
18	E3b_E5a	KnownJunction	0	0.00	12.60	1.52	0.00	0.00	0.00	0.00	0.00	6.30	4.07	1.46	0.00	1.62	1.75	0.00	2.75	2.50	0.00	0.00	4.13	3.49	0.00	6.75	0.00	0.00	1.89	0.00	2.29	1.29
19	Ix	Intron	0	1.99	1.49	0.00	1.66	0.00	3.51	0.47	0.00	2.33	1.67	0.28	0.43	0.30	0.84	0.00	2.88	2.08	3.65	6.67	0.46	0.99	0.00	0.42	0.00	0.33	0.73	0.00	0.00	0.00
20	Ix_SR1	SilentIntronRegion	0	2.01	1.51	0.00	1.68	0.00	3.54	0.47	0.00	2.36	1.69	0.28	0.43	0.30	0.84	0.00	2.90	2.10	3.68	6.73	0.46	1.00	0.00	0.42	0.00	0.33	0.74	0.00	0.00	0.00
21	E4_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.76	0.00	2.54	0.00	7.39	0.00	0.00	0.00	3.30	0.00	3.82	6.57	4.62	0.00	2.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER4a	ExonRegion	0	78.29	106.73	75.30	112.85	160.97	170.77	64.69	85.84	47.70	111.55	139.83	75.03	67.43	76.11	56.20	73.24	89.58	67.12	146.17	70.46	90.56	30.92	98.61	50.15	87.66	70.95	139.79	47.16	46.85
23	E4_Da	NovelBoundary	0	3.01	11.83	0.00	0.00	0.00	1.46	0.00	0.00	0.00	7.07	1.61	0.00	0.00	0.91	0.00	0.00	5.33	4.62	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E4a_E5a	KnownJunction	0	103.34	116.83	92.48	106.98	159.75	197.86	63.97	114.31	37.09	108.57	120.15	71.72	67.67	76.95	43.65	86.90	89.16	65.37	161.62	102.71	104.33	37.00	92.93	87.27	85.43	82.82	83.29	36.35	57.01
25	E5_Aa	NovelBoundary	0	2.77	0.00	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	0.00
26	ER5a	ExonRegion	0	49.78	59.88	51.41	78.84	86.95	82.84	51.13	77.21	56.36	54.87	66.74	58.27	73.26	47.23	47.03	46.57	65.43	46.89	82.01	46.20	55.25	29.06	61.72	49.07	44.63	56.94	66.59	28.31	42.62
27	ER5b	ExonRegion	0	0.00	0.00	0.16	0.00	0.00	0.00	0.00	0.00	1.12	0.00	6.12	1.06	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	1.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00