Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CECR7	Gene	0	37.81	28.05	98.95	50.67	23.81	30.23	26.12	42.71	87.53	36.34	44.67	36.96	15.42	0.66	80.01	1.70	1.68	153.58	52.33	13.80	36.67	11.48	53.34	2.79	0.40	3.53	7.90	0.00	8.53
2	441006	Transcript	0	19.84	12.51	56.12	23.76	13.12	18.85	14.08	18.98	51.63	23.23	26.42	22.84	8.55	0.75	45.55	0.78	0.70	83.42	23.14	6.29	17.90	5.55	36.49	2.23	0.60	2.17	3.05	0.00	4.38
3	414401	Transcript	0	46.51	19.67	41.62	16.01	8.18	9.44	16.34	18.35	37.30	13.14	30.26	22.71	3.44	0.69	22.74	1.04	0.63	65.71	29.94	7.51	24.74	2.27	18.74	1.51	0.20	2.64	2.31	0.00	1.31
4	ER1a	ExonRegion	0	1.12	0.51	0.40	2.98	2.71	0.29	0.24	0.29	0.46	1.80	0.22	1.42	0.42	0.07	3.43	0.00	0.24	1.24	0.00	0.00	0.14	0.14	0.65	0.00	0.00	0.00	0.15	0.00	0.01
5	E1_Ab	KnownBoundary	0	5.13	0.00	0.00	9.06	12.53	1.84	2.75	4.03	1.25	5.43	1.42	3.31	0.00	0.00	0.00	0.00	0.00	29.28	0.00	0.00	1.68	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1b	ExonRegion	0	28.43	17.77	125.07	210.85	65.97	18.67	41.00	78.09	44.82	37.40	25.43	31.27	46.76	0.05	44.04	0.96	3.07	167.76	35.86	20.04	19.88	9.86	76.17	0.83	0.55	2.44	8.80	0.00	15.03
7	E1a_E2a	KnownJunction	0	34.03	9.31	248.13	200.81	45.69	44.74	69.12	114.86	93.89	39.67	53.40	28.76	44.14	0.00	52.22	0.00	1.26	157.84	48.55	17.95	30.93	15.27	123.62	0.00	0.00	10.08	36.38	0.00	34.10
8	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	I1_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.63	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E2_Aa	NovelBoundary	0	2.42	7.37	1.22	0.00	0.00	0.00	0.00	0.00	1.58	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	ER2a	ExonRegion	0	48.35	31.03	104.11	59.13	20.39	34.71	43.86	188.75	101.46	68.36	49.98	41.26	64.63	1.41	63.84	0.99	3.40	203.37	58.66	36.96	37.11	29.84	72.74	1.56	1.99	5.45	19.55	0.00	32.37
12	E2_Da	NovelBoundary	0	47.13	0.00	0.00	0.00	14.74	4.60	0.00	1.99	2.80	2.04	0.00	1.87	0.00	0.00	15.55	0.00	0.00	4.62	0.00	7.61	1.93	4.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E3a	KnownJunction	0	31.56	53.13	57.48	28.90	7.37	32.00	95.95	262.22	159.21	196.69	118.22	92.80	127.06	1.09	157.46	0.00	5.83	571.77	121.39	54.17	72.52	32.04	129.03	0.00	5.53	0.00	41.45	0.00	46.91
14	I2	Intron	0	11.85	0.55	0.96	0.27	3.91	4.45	0.31	1.05	0.64	0.88	0.41	0.85	0.30	0.00	6.66	0.00	0.40	2.44	0.61	1.94	0.92	0.96	0.41	0.00	0.05	0.00	0.00	0.00	0.30
15	I2_AR1	ActiveIntronRegion	0	26.00	0.64	0.66	0.00	7.30	6.37	0.00	2.55	1.88	1.88	0.00	0.00	0.00	0.00	9.12	0.00	0.30	1.97	0.88	5.12	1.23	2.60	0.36	0.00	0.28	0.00	0.00	0.00	0.39
16	I2_SR1	SilentIntronRegion	0	8.48	0.52	1.03	0.34	3.11	4.00	0.38	0.70	0.34	0.64	0.51	1.05	0.37	0.00	6.08	0.00	0.42	2.55	0.55	1.18	0.85	0.57	0.43	0.00	0.00	0.00	0.00	0.00	0.29
17	E3_Aa	NovelBoundary	0	17.52	0.00	1.35	0.00	6.78	1.96	0.00	0.00	3.23	0.00	0.00	1.45	0.00	0.00	17.54	0.00	1.91	0.00	0.00	0.00	3.49	6.66	4.28	0.00	0.00	0.00	0.00	0.00	1.68
18	ER3a	ExonRegion	0	35.13	39.58	56.74	36.71	15.23	44.83	83.68	206.20	149.95	153.18	112.77	88.12	84.33	0.56	86.29	2.46	4.40	316.88	93.37	45.35	49.19	24.07	161.69	1.50	4.44	8.35	27.92	0.00	47.91
19	E3_Da	NovelBoundary	0	23.18	13.67	11.19	0.00	19.31	4.76	5.09	5.08	7.52	10.19	7.24	9.58	5.03	0.00	26.11	0.00	0.00	18.49	0.00	0.00	11.27	0.00	7.34	0.00	0.00	0.00	0.00	0.00	1.45
20	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E3a_E5a	KnownJunction	0	12.62	0.00	30.37	9.92	6.63	13.97	12.82	20.80	34.47	27.04	22.43	20.69	13.50	1.37	17.34	0.00	0.00	50.73	0.00	4.13	4.09	2.04	43.78	2.57	1.63	2.19	0.00	0.00	5.41
22	I3	Intron	0	32.06	23.94	40.82	16.71	12.54	15.20	13.89	15.91	37.27	18.27	23.97	17.69	3.02	0.28	33.39	0.96	0.70	69.85	23.60	6.46	28.47	2.46	13.36	1.18	0.30	0.62	1.54	0.00	2.33
23	I3_AR1	ActiveIntronRegion	0	14.14	15.94	13.37	8.07	13.11	3.51	2.27	9.07	8.87	3.99	3.25	6.18	0.97	0.00	13.22	0.93	0.00	27.99	7.19	0.00	5.90	0.68	2.21	0.00	0.00	0.00	0.00	0.00	0.00
24	I3_AR2	ActiveIntronRegion	0	15.35	35.92	4.20	3.30	8.36	14.63	1.63	13.36	25.84	13.32	7.75	6.90	2.10	0.00	35.95	0.00	0.00	48.24	1.17	1.72	9.16	0.00	4.26	0.00	0.00	0.00	1.42	0.00	0.82
25	I3_SR1	SilentIntronRegion	0	13.43	21.99	4.20	8.39	2.59	12.92	4.81	6.24	21.06	14.11	5.89	7.47	1.78	0.00	24.79	1.69	0.00	36.68	8.21	1.16	6.16	0.00	2.05	0.00	0.00	0.00	3.15	0.00	1.02
26	I3_AR3	ActiveIntronRegion	0	7.75	6.57	6.04	0.00	0.77	14.91	0.00	5.10	29.99	7.33	14.83	4.57	0.00	0.00	12.92	0.00	0.00	36.74	0.00	2.38	12.07	0.00	3.62	0.83	0.00	0.00	0.00	0.00	0.00
27	I3_AR4	ActiveIntronRegion	0	15.90	7.12	10.47	9.75	6.64	29.90	1.51	8.75	44.57	22.98	15.87	6.29	0.97	0.00	27.54	0.00	0.00	60.95	0.00	2.81	16.05	0.00	4.52	2.15	0.00	0.00	0.00	0.00	0.00
28	I3_SR2	SilentIntronRegion	0	19.89	16.42	9.51	11.40	17.05	12.82	6.19	7.18	34.60	20.04	8.07	12.37	1.49	0.00	25.53	0.00	0.36	49.64	6.12	3.06	13.75	1.29	2.34	0.83	0.00	0.00	2.63	0.00	2.24
29	I3_AR5	ActiveIntronRegion	0	21.97	18.13	19.65	17.92	4.88	13.57	7.31	11.05	22.00	19.85	17.55	8.48	4.13	0.00	34.29	0.00	0.19	57.55	10.38	5.32	18.01	0.23	3.16	1.34	0.00	0.20	0.23	0.00	2.42
30	I3_SR4	SilentIntronRegion	0	25.43	22.05	11.67	22.70	10.76	21.12	10.89	12.90	34.35	18.43	26.78	21.04	3.67	0.45	33.13	0.71	0.25	49.23	13.39	10.04	37.03	1.80	3.34	0.72	0.72	0.00	1.53	0.00	1.12
31	I3_AR7	ActiveIntronRegion	0	66.96	41.54	111.64	20.85	24.08	23.77	32.25	32.30	70.04	27.61	50.45	27.65	4.65	0.69	47.69	3.15	1.29	128.10	53.70	11.94	57.83	6.11	36.37	2.40	0.54	1.23	3.02	0.00	4.06
32	I3_SR5	SilentIntronRegion	0	49.44	32.73	84.85	25.29	15.95	12.71	26.17	26.13	59.21	18.46	35.60	41.38	2.49	0.64	50.12	0.58	2.86	118.54	60.06	7.67	39.60	6.02	36.13	1.62	0.67	2.88	1.71	0.00	4.54
33	E4_Aa	NovelBoundary	0	112.49	31.41	111.00	29.33	33.90	28.89	32.73	74.70	96.26	36.63	72.76	68.16	12.71	0.91	76.14	0.00	2.48	144.87	113.29	18.52	60.25	4.33	69.44	11.84	0.00	0.00	3.68	0.00	0.00
34	ER4a	ExonRegion	0	93.02	39.35	83.23	32.02	16.37	18.88	32.67	36.69	74.61	26.29	60.51	45.41	6.88	1.38	45.48	2.09	1.25	131.42	59.88	15.01	49.48	4.55	37.48	3.01	0.40	5.28	4.62	0.00	2.63
35	E4_Da	NovelBoundary	0	123.10	21.52	160.50	9.27	19.01	19.30	22.89	29.11	123.76	53.61	73.55	43.16	5.25	0.00	72.15	3.29	0.95	144.10	56.65	26.71	56.76	1.99	68.90	2.63	0.00	5.54	0.00	0.00	1.42
36	I4	Intron	0	54.53	28.89	82.22	21.92	16.13	16.14	24.90	28.82	72.92	23.84	32.02	29.78	5.47	0.67	63.07	1.52	0.73	135.20	50.79	9.40	31.05	4.41	33.39	0.53	0.17	3.08	2.02	0.00	3.03
37	I4_AR1	ActiveIntronRegion	0	52.33	19.33	52.66	14.34	9.38	16.48	20.94	29.19	73.00	27.73	28.73	24.45	1.65	0.00	46.55	0.46	0.00	133.16	50.25	9.02	36.07	1.66	31.61	0.56	0.00	5.20	0.95	0.00	2.28
38	I4_SR2	SilentIntronRegion	0	55.19	31.15	89.17	23.69	17.71	16.11	25.87	28.82	73.12	23.02	32.86	31.08	6.35	0.82	67.01	1.76	0.90	136.06	51.07	9.50	30.00	5.05	33.89	0.52	0.22	2.60	2.26	0.00	3.20
39	E5_Aa	NovelBoundary	0	23.06	17.35	51.92	9.27	39.94	20.53	9.61	22.44	63.62	12.06	23.85	24.94	4.36	0.00	52.02	0.00	0.00	173.89	56.65	14.97	38.35	4.52	34.72	2.99	0.00	2.06	4.47	0.00	2.01
40	ER5a	ExonRegion	0	45.78	37.03	137.59	58.39	30.02	42.31	29.20	35.83	119.95	40.85	56.61	46.41	11.74	0.80	115.87	2.35	1.86	198.30	69.43	14.74	49.48	14.45	65.03	4.13	0.18	4.31	9.02	0.00	7.71