Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SNAP29	Gene	0	97.10	126.37	123.21	88.22	86.87	139.36	76.71	68.47	91.39	136.24	150.54	103.86	88.46	158.01	85.73	101.99	107.67	81.41	135.31	90.17	87.13	143.23	95.90	145.57	146.04	165.67	71.65	107.08	99.45
2	215730	Transcript	0	47.68	67.69	76.62	137.83	70.26	84.76	54.50	30.25	42.69	80.12	90.83	61.51	47.25	91.09	51.11	62.14	66.47	62.94	73.28	52.47	56.05	78.24	60.43	84.31	81.98	101.26	40.93	78.00	61.69
3	490458	Transcript	0	4.95	1.62	1.34	0.00	0.99	4.14	4.05	3.51	8.04	3.50	1.67	2.10	3.31	3.11	12.50	1.85	9.74	4.67	2.89	0.55	1.29	3.30	0.36	11.15	3.21	2.52	0.55	4.09	6.27
4	439214	Transcript	0	3.23	0.00	0.02	7.08	0.02	0.45	0.00	0.30	0.28	1.17	0.40	0.90	0.21	1.18	1.79	0.00	1.70	0.62	0.03	0.04	0.23	0.05	0.02	0.74	0.69	0.25	0.89	1.33	0.00
5	ER1a	ExonRegion	0	32.48	4.08	37.46	213.17	51.22	14.32	54.34	15.51	6.43	12.63	7.02	16.10	20.86	15.24	38.70	37.35	19.57	53.65	7.82	44.63	13.17	46.42	33.72	5.54	11.10	48.42	4.38	49.13	23.14
6	E1_Ab	KnownBoundary	0	85.53	12.51	136.01	618.61	131.16	48.46	117.81	30.66	36.09	38.11	22.97	58.91	62.96	39.57	86.70	113.14	57.98	50.86	8.09	81.87	28.28	102.87	88.85	23.93	30.38	118.10	10.64	112.55	63.22
7	ER1b	ExonRegion	0	139.92	56.70	151.87	174.43	82.20	70.49	132.11	76.06	49.60	76.34	44.02	69.34	72.05	78.05	106.33	131.67	80.88	107.11	78.61	109.63	37.46	162.68	111.79	52.86	81.22	190.82	25.30	86.27	77.68
8	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	5.80	0.00
9	E1a_E3a	KnownJunction	0	475.66	208.06	169.07	144.30	223.71	165.98	173.13	294.07	197.79	154.63	114.96	158.85	214.82	252.92	231.21	179.70	172.40	227.84	298.97	390.59	82.31	525.89	212.81	259.42	278.65	545.44	97.16	219.49	207.06
10	Ix	Intron	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	0.00	0.00
11	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.48	0.00	0.00
12	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	5.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.28	0.00	0.00	4.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00
13	ER2a	ExonRegion	0	1.45	0.00	0.05	3.38	0.03	0.90	0.00	0.59	0.55	2.33	0.79	1.79	0.42	2.37	3.58	0.00	3.40	1.24	0.06	0.07	0.46	0.09	0.03	1.48	1.38	0.51	1.77	2.65	0.00
14	E2_Da	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	9.09	0.00	0.00	6.21	5.87	0.00	0.00	0.00	4.79	0.00	7.27	6.24	0.00	8.09	0.00	1.93	0.00	0.00	0.00	1.93	0.00	0.00	4.36	0.00
15	E2a_E3a	KnownJunction	0	5.01	0.00	0.00	10.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E3_Aa	NovelBoundary	0	0.00	7.56	1.52	0.00	0.00	0.00	0.00	2.19	2.98	0.00	0.00	0.00	1.21	1.35	14.95	0.00	4.82	0.00	8.09	0.00	0.00	2.04	0.00	0.00	1.78	4.08	0.00	0.00	1.55
17	ER3a	ExonRegion	0	494.41	247.97	425.33	431.15	239.82	233.71	291.38	319.97	295.22	266.00	215.23	210.47	268.76	338.58	296.18	288.27	210.36	221.19	256.64	411.24	126.35	596.57	266.01	266.17	345.92	443.28	141.20	249.95	210.02
18	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.61	1.64	0.00	1.75	2.80	4.25	0.00	0.00	5.60	0.00	0.00	0.00	0.00	1.99	0.00	3.05	3.56	0.00	0.00	0.00	7.59
19	E3a_E4a	KnownJunction	0	364.06	340.10	308.99	334.32	195.86	213.13	221.42	266.65	366.53	249.26	227.36	192.62	310.45	342.10	389.87	361.69	235.22	216.15	412.27	458.57	103.32	493.37	273.29	313.97	330.13	420.13	101.73	253.55	271.34
20	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER3b	ExonRegion	0	4.95	1.62	1.34	0.00	0.99	4.14	4.05	3.51	8.04	3.50	1.67	2.10	3.31	3.11	12.50	1.85	9.74	4.67	2.89	0.55	1.29	3.30	0.36	11.15	3.21	2.52	0.55	4.09	6.27
22	E3_Db	NovelBoundary	0	2.48	0.00	3.09	0.00	0.00	0.00	2.86	0.00	5.88	0.00	3.20	0.00	0.00	3.43	0.00	0.00	3.56	4.62	8.09	0.00	2.05	7.05	0.00	6.10	0.00	0.00	2.53	2.20	1.68
23	Ix	Intron	0	2.27	1.69	1.10	0.75	0.34	2.41	0.38	0.80	4.02	2.95	1.03	1.20	0.83	1.85	4.81	1.90	5.49	2.33	1.39	0.44	1.41	0.97	0.63	3.66	2.26	2.32	0.51	1.50	1.54
24	Ix_SR1	SilentIntronRegion	0	2.29	1.90	1.13	0.63	0.43	2.69	0.31	0.87	4.34	3.12	1.09	1.28	0.97	1.99	4.43	2.08	5.62	2.37	1.46	0.23	1.55	0.96	0.75	4.13	2.55	2.40	0.48	1.71	1.53
25	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	6.87	0.00	9.21	4.49	1.44	0.00	0.00	0.00	1.81	0.00	0.00	4.84	0.00	0.00	2.81	4.28	3.00	0.00	0.00	1.43	1.57	0.00	0.00	2.24
26	Ix_SR2	SilentIntronRegion	0	2.21	0.87	1.00	1.23	0.00	1.25	0.69	0.44	2.75	2.32	0.82	0.90	0.28	1.32	6.39	1.22	5.01	2.21	1.10	1.23	0.84	0.99	0.16	1.85	1.11	2.03	0.63	0.70	1.60
27	E4_Aa	NovelBoundary	0	5.60	0.00	0.00	0.00	0.00	1.96	0.00	2.34	6.33	8.47	2.85	3.16	0.00	4.10	8.77	6.88	8.78	0.00	0.00	3.64	6.74	0.00	0.00	0.00	0.00	5.92	0.00	0.00	1.45
28	ER4a	ExonRegion	0	382.16	332.58	247.52	216.49	193.06	273.70	309.61	332.72	292.66	284.46	261.27	264.91	339.62	362.68	321.38	370.52	244.33	256.54	361.70	403.63	149.09	499.99	297.25	245.26	348.41	470.67	178.34	298.16	265.38
29	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.25	0.00	0.00	1.42	0.00	0.91	0.00	3.52	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E4a_E5a	KnownJunction	0	354.50	248.48	233.08	122.94	104.63	304.75	309.53	280.78	331.63	247.70	240.96	315.78	376.97	381.29	359.37	380.96	286.18	196.88	250.87	381.82	171.67	492.15	268.07	183.45	264.29	378.46	138.36	226.77	282.17
31	E4a_E6a	NovelJunction	0	2.89	0.00	1.05	0.00	0.00	8.67	2.40	2.34	0.00	0.00	6.04	1.63	0.00	4.14	0.00	2.91	2.79	0.00	0.00	7.86	0.00	2.48	2.51	0.00	0.00	3.60	0.00	3.68	0.00
32	Ix	Intron	0	3.56	0.69	0.83	0.95	0.32	1.78	0.20	0.55	2.01	2.06	0.51	0.70	0.95	1.71	2.40	2.58	2.83	0.90	2.23	0.73	1.71	0.66	0.36	2.22	1.71	0.63	0.73	0.87	0.45
33	Ix_SR2	SilentIntronRegion	0	4.89	0.46	1.24	1.02	0.35	2.85	0.14	0.66	1.82	2.15	0.25	0.81	1.50	2.24	1.83	2.01	1.91	0.82	2.28	0.59	1.67	1.02	0.39	2.24	2.17	0.90	0.65	0.58	0.19
34	Ix_AR2	ActiveIntronRegion	0	1.12	1.21	0.50	0.00	0.00	0.65	2.10	0.00	2.17	0.10	0.00	0.86	1.51	0.07	2.80	3.56	0.78	0.00	8.31	1.43	1.89	0.07	0.00	1.51	1.27	0.00	1.91	0.85	0.00
35	Ix_SR3	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.30	0.00	0.00	0.00	0.00	0.00
36	Ix_AR3	ActiveIntronRegion	0	2.88	1.34	0.37	1.60	0.55	1.08	0.00	0.41	2.39	3.07	1.33	0.28	0.51	1.72	4.62	3.17	6.01	1.29	1.79	1.23	1.91	0.60	0.61	3.61	1.92	0.18	1.02	1.46	0.60
37	E5_Aa	NovelBoundary	0	11.97	0.00	1.47	0.00	0.00	1.88	0.00	4.88	0.00	1.84	0.00	1.14	0.00	2.37	9.97	6.66	8.26	0.00	0.00	9.26	0.00	0.00	4.43	0.00	0.00	0.00	0.00	0.00	0.00
38	ER5a	ExonRegion	0	452.84	383.97	208.64	207.19	116.79	302.90	347.46	367.62	445.70	348.23	349.00	306.56	397.67	391.74	373.66	372.55	257.37	257.12	407.51	401.53	208.55	605.08	340.06	328.21	374.83	565.34	172.87	287.51	266.60
39	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	1.97	0.00	0.00	5.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E5a_E6a	KnownJunction	0	368.36	340.20	212.20	115.83	115.24	239.34	188.07	262.12	291.98	270.83	273.26	250.21	299.05	383.15	386.08	314.56	226.71	188.79	396.53	350.98	166.78	514.37	230.24	299.38	280.46	294.09	37.37	199.86	222.58
41	Ix_SR1	SilentIntronRegion	0	1.18	0.00	1.44	0.00	0.00	1.05	1.41	0.00	1.70	2.26	0.00	0.00	0.00	0.39	4.20	0.21	1.15	0.14	0.00	0.00	1.21	1.26	0.00	0.00	0.00	0.00	0.00	0.00	0.94
42	Ix_AR1	ActiveIntronRegion	0	2.14	0.00	2.24	0.00	0.00	0.62	1.65	0.00	5.62	8.66	0.00	0.00	0.00	2.14	5.60	2.53	3.55	2.73	0.00	0.00	0.00	1.47	0.00	0.00	0.00	0.29	4.66	0.59	1.34
43	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.93	0.00	0.00	0.00	0.00	1.25
44	ER6a	ExonRegion	0	346.10	339.35	327.37	229.60	169.34	289.40	234.44	244.11	275.54	270.22	278.70	248.57	306.77	385.04	330.63	315.08	220.39	213.98	378.89	369.85	177.26	462.42	239.82	285.61	312.02	397.35	167.02	237.63	249.35
45	E6_Da	KnownBoundary	0	244.85	406.13	297.83	487.90	224.15	278.51	163.92	163.48	285.43	218.10	316.25	227.71	227.24	372.36	365.55	304.16	208.95	209.60	509.38	390.67	187.11	342.12	163.90	325.16	244.89	346.45	195.61	196.04	214.32
46	ER6b	ExonRegion	0	62.88	131.30	115.78	62.48	89.30	155.20	54.67	44.99	78.94	147.60	174.64	106.91	73.64	166.95	63.52	86.93	113.37	72.23	138.75	60.31	98.93	110.07	87.15	163.08	152.87	154.10	77.48	106.86	100.23