Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ICOSLG	Gene	0	13.94	7.05	12.93	4.24	39.37	19.46	8.48	10.57	16.95	23.10	8.73	2.74	3.92	155.67	52.35	112.53	132.80	92.59	37.87	32.27	105.84	87.68	89.45	76.39	80.80	310.28	55.87	114.68	88.23
2	400377	Transcript	0	1.61	0.00	0.33	1.50	4.98	0.37	0.27	1.98	0.38	0.46	1.43	0.00	0.15	6.31	6.48	21.12	8.35	23.45	4.05	1.15	8.29	4.25	12.81	4.39	3.74	22.89	0.37	9.51	2.46
3	400379	Transcript	0	5.86	0.61	3.41	0.61	1.80	7.47	3.49	1.51	2.55	3.36	1.14	0.43	0.47	41.71	14.71	27.19	43.98	28.49	11.56	5.69	28.27	16.93	14.93	13.72	14.08	28.27	4.42	12.58	7.02
4	407780	Transcript	0	13.16	6.13	12.60	3.02	33.33	13.00	3.84	6.10	19.47	19.36	4.58	2.96	3.25	134.07	53.96	67.95	109.36	40.14	30.16	15.34	85.07	48.23	64.39	58.47	86.48	337.66	52.47	101.18	72.89
5	344330	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	IG12	Intergenic	0	6.86	0.17	0.60	0.55	0.88	1.15	1.32	0.47	0.56	1.23	0.03	0.02	0.00	7.90	17.67	19.70	28.72	43.10	3.37	6.46	12.45	5.93	4.79	4.73	11.41	32.44	10.55	19.22	5.92
7	IG12_AR10	ActiveIntergenicRegion	0	0.86	0.00	0.07	0.00	0.00	0.55	0.00	0.00	0.90	0.19	0.48	0.00	0.00	1.53	6.88	9.27	6.15	25.79	1.28	1.86	8.68	0.88	0.83	3.46	9.18	39.30	19.97	9.33	6.56
8	IG12_AR9	ActiveIntergenicRegion	0	1.24	0.03	0.67	0.00	0.00	0.00	0.52	0.00	0.74	1.07	0.00	0.00	0.00	3.59	9.95	15.61	12.71	24.10	1.45	2.16	15.97	1.45	4.78	3.71	21.90	66.25	13.59	16.20	5.61
9	IG12_SR5	SilentIntergenicRegion	0	1.90	1.52	0.40	0.00	0.00	0.00	0.21	0.00	0.15	1.38	0.00	0.00	0.00	3.68	15.15	13.09	18.81	32.28	0.76	0.00	11.25	4.30	1.29	2.67	15.78	45.57	13.74	22.83	5.60
10	IG12_AR8	ActiveIntergenicRegion	0	3.71	0.00	0.30	0.00	0.00	1.40	1.08	0.00	0.77	1.29	0.00	0.00	0.00	6.16	16.37	20.94	25.74	37.59	3.58	7.58	16.76	2.85	3.07	7.91	29.54	70.45	43.94	34.32	10.24
11	IG12_SR4	SilentIntergenicRegion	0	3.97	0.51	0.13	0.00	0.78	0.69	0.16	0.29	0.77	1.38	0.00	0.00	0.00	4.85	19.26	23.87	25.69	41.73	3.74	2.64	15.45	4.90	4.96	4.86	16.16	44.98	21.64	26.71	9.11
12	IG12_AR3	ActiveIntergenicRegion	0	15.27	0.00	1.80	0.00	1.74	2.94	4.07	0.98	1.30	2.24	0.11	0.00	0.00	20.46	41.32	47.00	86.21	86.26	7.43	12.81	24.58	3.54	8.82	7.16	19.45	45.25	8.00	37.95	9.90
13	IG12_SR2	SilentIntergenicRegion	0	7.92	0.00	0.54	0.94	0.64	0.72	1.47	0.54	0.33	0.78	0.00	0.00	0.00	5.54	14.86	11.47	18.24	35.36	2.18	8.15	4.79	2.47	1.61	3.42	4.69	9.91	1.44	9.41	1.93
14	IG12_AR2	ActiveIntergenicRegion	0	4.47	0.00	0.41	1.76	2.39	2.02	0.25	0.68	0.00	1.59	0.00	0.23	0.00	11.32	2.26	15.22	14.46	38.34	4.31	3.00	18.89	30.06	15.52	6.07	2.45	38.72	3.82	11.99	8.12
15	ER1a	ExonRegion	0	3.22	0.00	0.66	2.99	9.96	0.75	0.55	1.42	0.77	0.92	1.41	0.00	0.30	5.19	4.58	34.74	13.93	32.25	0.00	2.30	11.28	6.06	18.82	0.59	0.39	17.93	0.75	3.78	3.23
16	ER1b	ExonRegion	0	2.45	3.13	3.67	6.34	25.62	8.23	4.24	2.00	1.59	12.86	2.60	1.79	1.36	35.95	19.31	96.48	63.36	69.79	11.85	17.69	45.74	47.09	87.71	9.55	16.27	92.86	14.57	41.34	32.25
17	E1_Ac	KnownBoundary	0	0.00	0.00	1.40	0.00	13.85	3.68	2.92	2.54	1.25	9.27	0.00	0.00	2.61	36.58	0.00	27.62	21.32	37.76	8.09	3.80	61.49	51.53	48.56	13.76	4.89	92.09	31.76	43.99	22.28
18	ER1c	ExonRegion	0	2.98	0.00	0.78	0.00	11.21	8.63	2.13	2.05	1.87	8.30	9.42	0.00	1.30	44.60	5.60	36.77	25.96	59.97	14.96	9.53	56.78	64.75	40.13	21.87	9.85	107.05	23.15	32.83	28.11
19	E1a_E2a	KnownJunction	0	6.02	0.00	0.00	0.00	17.98	20.76	2.35	4.93	1.55	6.03	16.73	0.00	0.00	57.19	8.17	48.19	32.35	83.22	32.37	18.19	63.90	71.03	37.28	27.34	10.30	126.12	31.31	39.90	25.42
20	E1a_E3a	NovelJunction	0	2.89	0.00	0.00	0.00	0.00	0.00	2.35	0.00	0.00	0.00	0.00	0.00	0.00	2.17	0.00	0.00	0.00	0.00	0.00	0.00	3.97	2.24	0.00	0.00	0.00	5.84	0.00	6.16	3.47
21	I1	Intron	0	0.92	0.00	0.04	0.00	1.11	0.56	0.00	0.09	0.13	0.62	0.03	0.09	0.00	3.41	3.46	3.95	3.80	7.24	0.97	1.25	4.79	2.50	1.55	1.57	0.90	4.96	0.37	2.18	1.37
22	I1_SR1	SilentIntronRegion	0	0.92	0.00	0.04	0.00	1.11	0.56	0.00	0.09	0.13	0.62	0.03	0.09	0.00	3.42	3.47	3.95	3.81	7.25	0.97	1.25	4.80	2.51	1.55	1.58	0.90	4.97	0.37	2.18	1.37
23	E2_Aa	NovelBoundary	0	5.31	0.00	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	1.30	0.00	0.00	7.71	9.77	13.16	7.65	4.62	0.00	0.00	18.65	4.57	0.00	2.21	0.00	1.67	0.00	4.27	10.43
24	ER2a	ExonRegion	0	11.45	2.88	1.59	0.00	15.67	15.42	3.49	10.55	2.19	7.99	11.67	0.00	1.05	95.35	5.19	115.80	57.71	128.07	54.09	33.45	88.64	94.18	69.33	61.44	33.33	149.46	16.08	59.16	47.40
25	E2_Da	NovelBoundary	0	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.71	0.00	6.58	2.50	0.00	8.09	0.00	11.99	0.00	0.00	2.45	0.00	1.67	1.89	0.00	2.58
26	E2a_E3a	KnownJunction	0	13.09	4.65	2.74	0.00	11.64	16.46	5.15	15.88	2.95	10.71	11.14	1.54	1.62	137.86	0.00	165.01	76.44	131.90	64.74	52.43	117.56	102.97	86.73	97.32	46.83	154.62	2.24	59.08	57.25
27	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	0.00	1.46	0.00	0.00	7.42	8.37	7.50	2.77	14.64	8.09	0.00	5.29	2.43	6.80	8.19	7.08	27.85	0.00	15.23	1.68
28	I2	Intron	0	1.45	0.73	0.00	0.00	0.83	1.24	0.45	0.00	0.13	0.49	0.00	0.00	0.00	3.96	7.53	4.40	3.03	7.52	0.90	0.93	10.22	1.32	1.33	3.16	1.53	3.28	1.03	2.48	1.77
29	I2_SR1	SilentIntronRegion	0	1.45	0.73	0.00	0.00	0.83	1.24	0.46	0.00	0.13	0.49	0.00	0.00	0.00	3.97	7.55	4.41	3.04	7.53	0.90	0.93	10.25	1.33	1.33	3.16	1.54	3.29	1.04	2.49	1.78
30	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	2.95	0.00	0.00	0.00	2.04	0.00	0.00	0.00	13.29	0.00	14.15	6.19	13.87	0.00	0.00	11.03	0.00	0.00	8.19	3.18	16.26	0.00	2.16	0.00
31	ER3a	ExonRegion	0	22.10	7.79	6.97	3.13	45.77	37.12	21.09	17.75	6.03	41.12	15.88	3.09	2.86	226.42	38.98	207.25	221.82	194.52	50.93	64.17	183.67	181.93	173.67	89.54	77.89	394.72	56.02	165.18	137.37
32	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	6.04	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	2.13	7.57	6.35	6.46	23.12	0.00	0.00	7.02	0.00	2.51	0.00	0.00	2.19	0.00	6.52	3.37
33	E3a_E4a	KnownJunction	0	35.57	4.75	12.16	0.00	138.38	72.78	58.59	34.84	10.60	78.85	38.69	8.37	4.49	386.83	120.59	399.09	455.88	255.45	32.37	89.07	337.25	319.32	410.35	105.63	145.40	1053.93	116.29	454.08	371.50
34	I3	Intron	0	4.97	0.00	0.23	0.00	0.34	0.77	0.14	0.26	0.32	0.51	0.00	0.00	0.00	4.42	5.05	4.81	5.77	17.21	4.94	1.55	6.61	1.65	1.27	3.78	2.81	7.18	0.51	2.98	3.81
35	I3_SR1	SilentIntronRegion	0	4.98	0.00	0.24	0.00	0.34	0.77	0.14	0.26	0.32	0.51	0.00	0.00	0.00	4.43	5.06	4.82	5.78	17.26	4.95	1.55	6.63	1.65	1.27	3.79	2.82	7.19	0.52	2.99	3.82
36	E4_Aa	NovelBoundary	0	8.20	0.00	0.00	0.00	7.22	0.00	0.00	0.00	3.11	0.00	0.00	0.00	0.00	5.16	0.00	9.41	13.87	51.24	0.00	0.00	9.43	0.00	4.68	6.04	0.00	12.23	0.00	2.29	0.00
37	ER4a	ExonRegion	0	17.83	4.91	16.56	5.03	53.92	30.63	17.17	19.96	9.75	35.17	21.26	4.86	3.71	249.13	47.85	230.53	244.59	205.99	66.75	74.91	182.36	161.19	159.59	109.69	95.49	433.88	78.53	211.39	147.98
38	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	2.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.21	3.69	4.62	0.00	0.00	0.00	2.48	0.00	0.00	3.33	2.19	0.00	3.95	3.40
39	E4a_E5a	KnownJunction	1	27.78	12.60	18.64	0.00	120.84	46.65	5.32	28.76	6.88	41.90	32.11	6.66	4.59	255.95	32.49	288.25	308.74	213.45	97.11	88.24	225.66	214.45	150.01	162.04	108.39	397.04	88.96	279.02	148.23
40	E5_Aa	NovelBoundary	0	2.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	3.49	0.00	0.00	4.13	3.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER5a	ExonRegion	0	17.72	6.79	12.96	7.14	65.94	37.41	11.90	17.86	6.33	36.79	20.95	1.93	7.98	222.10	50.74	225.33	235.10	187.83	67.45	67.88	188.98	150.72	127.43	103.93	95.61	408.31	83.47	215.65	145.95
42	E5_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	2.57	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78
43	E5a_E6a	KnownJunction	0	20.64	0.00	6.30	21.57	40.53	50.91	12.87	16.12	4.60	36.11	30.08	1.39	1.34	233.51	32.09	253.90	226.92	165.42	88.79	82.78	198.27	137.05	179.32	117.36	106.53	416.31	100.74	274.17	122.25
44	E6_Aa	NovelBoundary	0	3.01	0.00	3.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.09	0.00	3.82	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	2.05
45	ER6a	ExonRegion	0	18.81	5.47	12.16	7.92	70.02	39.83	15.34	20.05	6.02	35.61	17.88	1.24	5.30	227.06	33.91	216.38	256.30	201.73	71.78	71.44	179.72	139.66	176.05	118.85	95.69	437.00	95.65	269.91	128.55
46	E6_Da	KnownBoundary	0	5.90	0.00	3.09	0.00	17.98	9.09	0.00	0.00	4.08	2.04	0.00	0.00	0.00	36.05	8.37	20.43	52.96	23.89	8.09	4.13	30.80	4.47	17.88	16.93	25.65	40.34	7.60	26.28	4.26
47	E6a_E6b	KnownJunction	0	11.21	12.02	10.99	0.00	54.38	31.35	19.22	21.50	10.45	36.63	13.29	0.00	6.18	146.06	42.46	161.18	167.96	250.82	56.65	57.64	129.76	146.34	147.55	90.74	61.71	388.67	73.11	200.35	112.34
48	E6a_E6c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER6b	ExonRegion	0	5.86	0.61	3.41	0.61	1.80	7.47	3.49	1.51	2.55	3.36	1.14	0.43	0.47	41.71	14.71	27.19	43.98	28.49	11.56	5.69	28.27	16.93	14.93	13.72	14.08	28.27	4.42	12.58	7.02
50	E6_Ab	KnownBoundary	0	10.74	4.65	4.29	10.57	0.00	2.99	0.00	0.00	2.98	10.55	2.75	0.00	1.75	57.45	8.37	33.74	75.74	67.43	24.28	0.00	27.84	41.37	31.86	31.82	39.63	65.32	0.00	17.03	12.31
51	ER6c	ExonRegion	0	18.14	12.49	19.65	7.99	63.71	31.56	15.86	20.22	24.80	34.80	16.03	3.44	6.90	230.01	75.18	193.15	186.68	175.88	56.82	61.69	155.29	162.71	144.35	133.20	107.14	382.51	84.93	164.12	138.79
52	E6_Db	KnownBoundary	0	11.03	12.99	21.10	0.00	25.64	18.42	5.09	7.91	5.51	19.65	10.88	0.00	4.52	217.09	25.91	100.60	149.84	46.23	8.09	18.11	126.11	69.23	78.45	68.55	76.91	329.11	90.00	124.33	58.90
53	ER6d	ExonRegion	0	13.16	6.13	12.60	3.02	33.33	13.00	3.84	6.10	19.47	19.36	4.58	2.96	3.25	134.07	53.96	67.95	109.36	40.14	30.16	15.34	85.07	48.23	64.39	58.47	86.48	337.66	52.47	101.18	72.89
54	E6_Ac	KnownBoundary	1	2.95	0.00	7.87	0.00	28.30	1.96	4.75	3.78	15.04	6.91	0.00	0.00	2.42	34.12	27.31	3.82	25.05	13.87	32.37	2.98	31.77	27.42	19.75	33.56	28.38	87.16	11.68	30.33	21.06
55	ER6e	ExonRegion	0	1.70	0.15	4.26	0.00	27.89	3.54	2.20	1.82	4.21	3.35	0.00	0.00	0.18	26.15	12.94	14.63	22.89	8.28	18.05	3.13	13.76	15.15	9.37	29.84	19.34	71.37	13.05	20.52	17.74
56	IG11_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.08	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	3.90	0.00	0.00
57	IG11_AR2	ActiveIntergenicRegion	0	0.16	0.00	0.55	0.00	5.23	0.11	0.15	0.14	0.17	0.77	0.00	0.00	0.00	4.30	3.58	8.52	2.17	10.09	13.03	2.95	7.84	27.62	28.19	12.60	0.87	33.08	9.01	10.79	21.75
58	IG11_SR1	SilentIntergenicRegion	0	0.77	0.00	0.07	0.00	7.22	0.00	0.18	0.25	0.00	0.32	0.00	0.00	0.06	2.46	0.45	5.76	1.20	4.43	8.24	0.49	5.16	16.23	15.25	3.46	0.89	11.29	4.41	4.80	11.05
59	IG11_AR1	ActiveIntergenicRegion	0	1.24	0.00	1.02	0.00	78.69	0.00	1.17	0.00	0.00	0.00	0.00	0.00	0.00	0.63	0.00	0.00	0.00	1.30	7.66	0.00	2.48	0.31	3.14	0.00	0.00	1.75	0.00	0.00	4.32