Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C21orf45	Gene	0	79.54	107.22	99.98	196.25	183.19	117.65	103.94	133.66	126.40	95.71	97.64	158.66	178.92	59.80	82.15	80.28	39.80	125.44	245.77	45.61	219.11	81.69	157.74	73.48	83.72	87.61	122.70	133.32	135.81
2	290130	Transcript	0	122.41	104.81	237.03	322.92	339.78	131.56	110.53	204.57	159.48	108.99	123.56	183.82	200.34	83.23	84.92	88.20	47.00	164.98	284.18	55.40	230.83	115.54	189.17	93.66	115.03	116.22	163.08	197.40	145.05
3	486363	Transcript	0	5.82	1.02	4.79	6.51	5.83	2.88	2.10	3.91	2.24	1.77	1.93	2.97	3.45	3.43	1.72	3.61	1.54	2.47	7.93	3.24	9.39	2.05	5.20	3.62	1.38	2.11	5.28	4.04	3.72
4	ER1a	ExonRegion	1	66.93	26.29	69.19	123.15	81.95	33.50	47.56	103.25	25.76	37.29	28.20	120.21	112.52	40.14	21.57	49.16	31.53	120.33	79.11	24.05	69.08	71.44	114.77	22.72	33.55	86.60	26.49	115.72	76.34
5	E1a_E2a	KnownJunction	0	112.13	60.69	229.44	159.61	346.32	94.12	98.35	212.40	58.19	77.29	90.82	206.26	156.04	89.62	66.17	60.20	56.16	146.15	153.76	39.61	142.91	109.68	137.06	73.15	102.33	95.83	134.93	190.78	136.15
6	Ix	Intron	0	0.74	1.51	0.58	2.47	0.84	2.13	0.35	1.27	0.39	0.75	1.85	1.27	1.00	1.24	0.79	1.28	1.29	1.99	3.30	1.42	3.93	0.00	1.87	0.37	0.25	0.54	0.00	2.25	0.23
7	Ix_SR1	SilentIntronRegion	0	0.74	1.52	0.58	2.49	0.85	2.15	0.35	1.28	0.39	0.75	1.86	1.28	1.01	1.25	0.80	1.29	1.29	2.01	3.33	1.43	3.96	0.00	1.88	0.37	0.25	0.55	0.00	2.26	0.23
8	I1	Intron	0	1.07	1.61	0.78	1.54	0.87	1.38	0.50	0.72	1.00	1.03	0.43	0.95	0.25	1.18	0.99	2.19	1.39	2.69	3.77	0.98	3.77	0.26	0.32	1.31	1.12	0.39	0.33	1.11	1.39
9	I1_SR1	SilentIntronRegion	0	1.07	1.61	0.78	1.54	0.87	1.38	0.51	0.72	1.00	1.03	0.43	0.95	0.25	1.18	0.99	2.20	1.39	2.69	3.77	0.99	3.78	0.26	0.32	1.31	1.13	0.39	0.33	1.11	1.39
10	E2_Aa	NovelBoundary	0	3.01	4.36	0.00	0.00	6.19	0.00	0.00	0.00	8.80	0.00	0.00	4.52	1.24	0.00	14.75	7.65	1.33	4.62	8.09	0.00	6.46	0.00	0.00	3.05	1.93	0.00	0.00	0.00	1.68
11	ER2a	ExonRegion	0	133.66	80.41	399.93	537.86	455.25	94.75	111.83	260.64	88.72	100.87	130.73	186.36	186.28	96.50	41.63	74.98	44.30	148.84	213.25	54.07	186.09	119.25	183.50	100.88	129.69	127.23	150.65	160.77	138.54
12	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.87	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2a_E3b	KnownJunction	0	160.97	117.89	505.57	705.74	733.61	116.64	110.60	296.55	150.62	116.76	158.27	186.56	202.94	104.34	44.25	81.85	47.52	200.22	250.64	80.38	250.49	115.47	217.68	128.06	98.20	161.40	198.19	199.81	139.12
14	E2a_E4a	NovelJunction	0	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.39	1.54	2.93	1.06	0.00	0.00	1.19	4.62	24.28	0.00	0.00	2.29	0.00	0.00	0.00	0.00	5.07	0.00	1.45
15	E3_Aa	NovelBoundary	0	2.36	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	3.47	0.00	0.00	0.00	0.88	4.62	0.00	0.00	1.72	0.00	0.00	2.33	0.00	0.00	0.00	0.00	0.00
16	ER3a	ExonRegion	0	3.17	2.04	9.25	13.02	11.56	2.09	2.10	5.67	2.54	2.37	2.64	3.54	3.90	2.59	1.01	1.57	0.88	3.98	4.34	1.86	5.91	2.24	3.87	2.97	1.94	2.61	3.00	3.88	2.36
17	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	1.56	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
18	ER3b	ExonRegion	0	114.73	82.31	265.31	468.07	387.13	134.24	141.63	210.35	98.14	132.00	160.13	242.32	246.89	103.83	48.43	90.50	71.72	158.38	191.46	52.23	278.68	109.48	228.02	97.00	129.09	124.56	173.11	214.88	167.21
19	E3_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	1.96	0.00	4.68	0.00	2.04	2.47	2.59	1.50	4.36	8.37	0.00	0.00	0.00	0.00	0.00	1.56	0.00	0.00	5.56	1.48	0.00	1.94	1.75	0.00
20	E3a_E4a	KnownJunction	0	133.90	97.14	115.03	321.38	254.66	262.13	344.55	252.31	193.10	191.10	266.71	367.67	411.56	119.18	76.14	147.03	98.43	245.82	283.24	42.84	382.93	136.23	357.85	165.27	210.22	214.44	273.88	316.72	309.20
21	E3a_E5a	NovelJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	2.46	0.00	0.00	3.67	0.00	0.00	0.00	1.06	0.00	0.00	0.00	9.25	8.09	0.00	0.00	0.00	0.00	0.00	0.00	8.54	0.00	0.00	0.00
22	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.78	0.00	0.00	0.00	0.00	3.88	0.00	0.00	0.00	0.00	0.92	0.00	0.00	0.00	0.00	0.00
23	I3_SR1	SilentIntronRegion	0	2.18	1.09	0.28	2.43	1.66	1.63	0.68	0.31	0.00	2.20	0.00	0.42	0.55	0.21	2.34	0.84	3.04	3.59	4.24	0.93	4.59	0.00	0.00	1.44	1.21	0.53	0.00	0.28	0.79
24	E4_Aa	NovelBoundary	0	15.63	0.00	0.00	9.27	0.00	6.25	0.00	0.00	2.56	0.00	1.20	4.22	1.18	2.22	0.00	0.00	3.69	0.00	8.09	0.00	10.31	2.48	0.00	0.00	0.00	2.06	0.00	0.00	1.91
25	ER4a	ExonRegion	0	183.39	188.70	133.61	257.75	205.01	292.76	270.63	364.06	263.10	228.68	285.71	315.79	377.75	155.57	130.60	159.44	82.71	232.77	450.90	104.60	500.16	185.91	429.79	187.90	254.60	219.72	247.20	354.36	301.74
26	E4_Da	KnownBoundary	0	8.85	0.00	1.49	0.00	0.00	4.87	4.86	1.94	4.75	3.67	0.00	2.38	0.00	4.30	7.57	3.82	2.97	0.00	0.00	15.30	9.51	0.00	0.00	5.68	0.00	0.00	0.00	0.00	3.37
27	E4a_E5a	KnownJunction	1	183.68	187.11	137.16	220.44	215.16	296.77	173.30	230.91	451.18	204.76	221.00	232.74	338.73	110.18	211.88	166.23	62.10	244.02	663.58	80.30	453.77	195.88	321.26	147.74	235.34	146.21	306.93	391.94	219.14
28	ER4b	ExonRegion	0	8.47	0.00	0.33	0.00	0.10	3.68	2.10	2.16	1.94	1.18	1.23	2.41	3.00	4.26	2.43	5.65	2.20	0.96	11.52	4.63	12.87	1.86	6.52	4.28	0.81	1.62	7.55	4.20	5.07
29	E4_Db	NovelBoundary	0	0.00	0.00	0.95	0.00	11.94	1.50	2.92	0.00	1.31	6.11	0.00	1.23	4.59	2.28	0.00	0.00	3.20	4.62	16.18	0.00	11.11	0.00	2.51	0.00	0.00	0.00	1.89	2.29	0.00
30	I4	Intron	0	1.97	4.43	1.53	4.11	5.60	3.78	3.23	1.48	3.66	0.83	0.55	2.62	2.52	1.81	7.15	5.32	1.71	5.74	4.76	3.16	13.57	0.21	0.41	3.94	1.80	1.44	1.05	0.37	1.00
31	I4_SR1	SilentIntronRegion	0	1.97	4.45	1.54	4.13	5.62	3.80	3.25	1.48	3.67	0.83	0.55	2.63	2.53	1.82	7.18	5.35	1.72	5.77	4.78	3.17	13.63	0.21	0.42	3.96	1.81	1.45	1.05	0.38	1.00
32	E5_Aa	NovelBoundary	0	2.60	3.97	1.12	10.57	7.07	5.45	0.00	0.00	2.98	1.48	0.00	2.89	0.00	3.26	0.00	10.56	0.00	0.00	8.09	7.69	9.47	0.00	2.36	8.55	5.19	0.00	9.44	0.00	0.00
33	ER5a	ExonRegion	0	77.06	156.49	80.91	190.71	206.39	153.60	121.52	123.68	182.43	116.94	112.35	170.76	205.54	58.57	124.02	96.80	40.39	130.32	344.76	54.00	282.65	81.51	160.73	89.41	91.09	80.03	161.31	125.38	160.98