Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SAMD10	Gene	0	37.52	29.60	92.48	11.32	55.43	51.83	24.47	37.59	67.80	74.09	24.22	39.21	58.49	72.46	55.54	75.09	103.66	55.33	48.22	10.41	34.82	65.58	64.59	61.13	41.08	58.51	27.06	50.73	63.13
2	498830	Transcript	0	0.00	0.00	3.55	4.97	8.37	3.69	0.00	5.55	2.45	3.65	1.20	4.23	0.68	3.01	0.00	5.06	5.21	0.71	0.00	1.01	4.04	3.46	4.41	0.00	6.30	0.63	0.15	5.90	3.01
3	478694	Transcript	0	0.00	0.00	1.30	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	1.18	1.26	0.00	0.00	1.35	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	0.00
4	450107	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	369885	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	369886	Transcript	0	8.55	0.00	14.10	0.00	0.00	1.92	2.46	11.10	8.19	9.31	4.21	4.70	7.04	18.79	0.00	9.56	11.37	13.87	8.09	2.98	2.05	13.90	6.50	7.72	1.44	11.93	2.44	4.54	4.75
7	ER1a	ExonRegion	1	0.00	0.00	2.51	9.95	16.74	4.23	0.00	4.12	0.72	3.23	0.95	2.67	1.35	3.05	0.00	10.12	5.37	1.42	0.00	2.02	4.62	4.98	8.82	0.00	5.66	1.26	0.29	11.80	4.40
8	ER1b	ExonRegion	1	2.70	10.99	24.31	6.53	46.56	16.39	3.95	12.60	16.85	15.35	2.29	8.52	9.07	8.75	13.36	20.19	33.49	7.54	3.76	0.69	22.26	24.71	19.84	2.56	9.55	10.92	12.16	23.97	27.98
9	E1_Da	NovelBoundary	0	5.19	0.00	0.00	0.00	0.00	6.64	0.00	2.29	1.89	0.00	0.00	0.00	3.18	6.23	0.00	3.82	5.13	0.00	0.00	0.00	3.57	2.33	2.17	2.75	5.61	0.00	0.00	0.00	4.75
10	E1a_E3a	KnownJunction	0	0.00	0.00	1.30	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	1.18	1.26	0.00	0.00	1.35	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	0.00
11	E1a_E4a	KnownJunction	0	0.00	0.00	4.58	0.00	0.00	3.15	0.00	6.97	4.17	4.07	1.46	5.78	0.00	2.97	0.00	0.00	5.04	0.00	0.00	0.00	3.45	1.94	0.00	0.00	6.93	0.00	0.00	0.00	1.62
12	E2_Aa	NovelBoundary	0	0.00	0.00	3.91	0.00	6.34	0.00	2.57	2.39	0.00	2.04	0.00	1.39	1.94	3.01	0.00	3.67	5.72	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00
13	ER2a	ExonRegion	0	4.47	1.23	9.85	0.14	9.36	3.55	1.50	2.66	4.60	7.12	1.91	2.10	5.73	6.48	4.67	9.16	7.29	11.22	4.80	0.62	2.30	5.69	6.94	2.13	2.29	6.98	1.79	7.72	7.87
14	E2a_E3a	KnownJunction	0	2.42	0.00	3.89	0.00	0.00	1.96	8.12	1.79	6.82	4.07	0.00	2.83	1.37	4.25	0.00	0.00	3.47	4.62	16.18	0.00	3.69	1.90	0.00	0.00	1.93	16.31	0.00	4.18	6.57
15	E2a_E4a	KnownJunction	0	8.55	0.00	14.10	0.00	0.00	1.92	2.46	11.10	8.19	9.31	4.21	4.70	7.04	18.79	0.00	9.56	11.37	13.87	8.09	2.98	2.05	13.90	6.50	7.72	1.44	11.93	2.44	4.54	4.75
16	Ix	Intron	0	6.60	6.53	4.97	1.18	2.96	8.62	3.77	5.17	6.45	5.80	1.57	1.97	0.85	9.18	12.74	20.46	26.04	7.05	4.92	0.37	3.22	3.27	1.39	7.10	5.11	1.64	0.00	4.57	2.76
17	Ix_SR1	SilentIntronRegion	0	5.67	5.07	4.43	1.04	2.61	6.54	3.17	3.43	4.62	4.52	0.78	1.34	0.42	6.92	8.11	15.49	18.08	6.50	3.39	0.36	2.80	3.00	1.57	4.44	4.07	1.84	0.00	2.99	1.56
18	Ix_AR2	ActiveIntronRegion	0	13.93	12.87	19.73	0.00	4.98	18.67	8.06	7.06	20.13	10.11	0.00	10.10	0.00	17.91	48.54	37.33	52.42	11.83	11.31	2.81	5.11	7.21	0.00	8.96	4.53	3.01	0.00	6.11	1.34
19	Ix_AR1	ActiveIntronRegion	0	9.37	11.17	5.93	1.76	4.02	15.12	5.57	10.97	11.84	9.91	4.37	3.61	2.39	16.40	26.36	36.40	51.58	8.66	9.75	0.24	4.55	3.97	0.89	16.05	8.71	0.92	0.00	9.89	6.93
20	E3_Aa	NovelBoundary	1	9.44	14.54	7.87	0.00	19.90	10.44	25.35	9.01	21.04	14.14	0.00	6.02	0.00	21.49	0.00	26.85	75.27	13.74	8.09	0.00	3.61	6.13	0.00	28.29	16.25	14.68	0.00	0.00	1.49
21	ER3a	ExonRegion	1	16.29	17.07	18.77	8.94	9.92	29.40	9.72	25.26	37.65	30.17	6.36	12.16	13.96	35.79	25.13	62.29	62.32	18.05	37.72	3.17	13.80	23.34	20.14	28.76	24.02	26.85	5.49	44.05	20.41
22	E3_Da	NovelBoundary	0	8.61	0.00	3.09	0.00	0.00	3.34	2.92	9.01	7.28	7.79	2.78	0.00	0.00	9.24	9.37	9.41	10.87	0.00	8.09	0.00	0.00	0.00	0.00	2.87	1.86	0.00	0.00	5.93	0.00
23	E3a_E4a	KnownJunction	1	21.41	21.43	25.04	8.41	7.07	22.45	13.73	45.98	46.41	34.47	2.47	10.12	18.12	39.77	23.92	64.56	80.94	15.41	8.09	3.23	14.56	38.46	47.28	45.22	26.37	30.25	23.06	53.69	28.16
24	Ix	Intron	0	3.52	5.19	3.66	0.44	2.38	6.53	1.47	3.25	7.78	3.16	1.38	2.51	0.24	6.34	6.90	8.30	26.35	2.66	3.50	0.34	3.04	2.63	0.99	4.06	4.87	1.82	0.22	4.56	1.34
25	Ix_AR2	ActiveIntronRegion	0	2.77	3.86	3.18	0.00	0.00	3.43	0.05	3.41	2.52	1.06	0.74	1.30	0.00	5.19	7.06	7.32	19.10	1.39	1.97	0.00	3.03	1.11	0.66	0.51	3.84	2.43	0.00	2.52	0.00
26	Ix_SR1	SilentIntronRegion	0	3.55	0.00	4.52	0.00	0.00	2.71	2.02	0.42	6.07	1.28	0.51	4.59	0.00	3.14	0.32	6.80	18.63	2.81	3.49	0.00	0.49	0.98	1.81	3.07	0.65	2.87	0.00	0.51	0.00
27	Ix_AR1	ActiveIntronRegion	0	3.73	5.84	3.75	0.57	3.13	7.56	1.82	3.37	9.26	3.82	1.59	2.72	0.31	6.83	7.24	8.67	28.73	2.99	3.91	0.44	3.19	3.13	1.03	5.05	5.39	1.61	0.29	5.33	1.77
28	E4_Aa	NovelBoundary	0	2.54	0.00	1.47	0.00	0.00	6.60	7.61	8.56	5.30	3.44	0.00	2.80	1.37	9.62	0.00	16.52	30.77	0.00	0.00	0.00	0.00	4.18	12.71	5.14	8.18	7.42	6.41	21.12	6.80
29	ER4a	ExonRegion	0	39.38	18.63	46.16	6.78	26.81	34.57	32.64	51.03	48.08	62.40	19.34	28.94	35.13	72.77	48.47	71.23	116.38	45.23	53.12	5.14	32.31	64.93	63.57	42.79	36.53	58.81	14.34	54.09	43.19
30	E4_Da	KnownBoundary	0	43.89	22.49	69.54	0.00	43.33	46.31	25.23	41.21	52.87	60.92	20.12	41.99	50.66	65.85	59.60	91.03	123.10	70.77	80.70	10.42	37.54	46.43	60.87	48.99	40.50	55.75	7.31	36.21	62.92
31	ER4b	ExonRegion	0	46.03	23.91	79.89	10.16	42.07	60.58	22.20	62.37	74.92	70.54	19.72	45.85	52.63	93.14	49.71	97.47	130.42	60.53	77.57	14.05	32.63	88.16	68.16	58.29	41.71	72.47	33.32	46.12	87.89
32	E4_Db	NovelBoundary	0	0.00	0.00	1.20	0.00	0.00	1.92	5.03	0.00	1.46	2.04	1.23	0.00	1.27	4.56	0.00	7.57	11.77	4.62	0.00	0.00	0.00	0.00	0.00	5.02	0.00	0.00	0.00	0.00	0.00
33	E4b_E5a	KnownJunction	0	31.26	12.80	53.22	0.00	27.71	31.38	18.25	40.91	45.74	50.73	11.48	28.37	21.34	65.72	71.56	54.08	92.56	32.36	32.37	7.11	23.95	72.68	46.20	45.88	15.80	25.36	29.57	11.59	17.33
34	Ix	Intron	0	0.00	0.00	0.00	0.00	0.00	1.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.56	0.00	0.00	1.86	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.78	0.00	0.00	2.03	0.00
35	Ix_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.58	0.00	0.00	1.90	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.82	0.00	0.00	2.08	0.00
36	ER5a	ExonRegion	0	42.91	23.91	102.86	11.35	69.71	58.55	28.44	51.95	66.60	76.41	19.53	46.76	53.86	89.67	42.98	81.28	130.47	59.31	62.52	11.75	29.73	76.46	71.82	54.83	38.57	75.13	19.48	58.17	58.56
37	E5_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.44	0.00	0.00	0.00	3.58	0.00	8.09	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	0.00	0.00
38	E5a_E6a	KnownJunction	0	77.33	14.06	92.98	10.35	72.06	51.53	25.17	40.11	60.42	71.26	23.44	45.72	63.66	75.86	65.38	69.69	106.99	56.64	56.65	20.51	35.46	76.23	76.04	63.17	34.89	59.65	11.73	36.75	36.58
39	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.82	0.00	7.97	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00
40	ER6a	ExonRegion	0	49.89	29.87	80.16	12.14	32.08	54.32	24.07	42.03	53.01	58.84	18.83	44.85	51.47	78.56	38.01	75.76	94.35	69.80	47.06	16.53	27.77	69.69	77.27	51.12	29.52	51.13	10.59	44.10	41.27
41	E6_Da	NovelBoundary	0	5.60	0.00	0.00	0.00	6.93	0.00	0.00	0.00	2.31	0.00	0.00	0.00	0.00	0.00	9.97	0.00	7.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.63	0.00	0.00	0.00
42	E6a_E7a	KnownJunction	0	85.53	27.24	114.56	0.00	88.28	81.57	31.12	56.09	88.22	63.87	22.05	54.79	80.18	87.03	61.39	113.22	124.81	94.78	56.65	19.27	55.39	71.08	82.94	66.75	44.78	53.90	9.39	59.85	65.07
43	E7_Aa	NovelBoundary	0	0.00	0.00	1.97	0.00	0.00	0.00	0.00	2.54	1.89	4.07	0.00	1.51	0.00	2.44	17.14	0.00	4.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER7a	ExonRegion	0	74.62	38.85	141.46	18.53	94.31	66.86	27.32	53.71	71.05	86.58	24.32	52.31	66.18	88.94	66.92	97.39	111.67	77.88	48.38	16.52	49.60	90.39	98.02	81.41	51.78	56.17	9.69	54.41	57.23
45	E7_Da	KnownBoundary	0	63.88	51.48	161.87	45.51	74.28	40.52	31.64	30.61	57.46	62.55	18.03	48.70	45.16	62.92	44.05	62.19	106.13	55.48	24.28	0.00	36.54	126.89	95.74	51.38	46.41	39.40	9.64	33.38	40.97
46	ER7b	ExonRegion	0	59.55	29.36	142.51	17.36	45.44	47.99	27.33	37.64	57.41	91.81	21.02	41.28	64.40	86.48	49.58	71.67	127.27	76.32	37.70	6.53	36.64	90.67	99.19	52.82	32.70	51.95	25.98	60.41	64.94
47	E7_Db	KnownBoundary	0	71.49	43.14	96.92	26.31	47.75	80.96	23.23	40.66	89.35	132.98	33.06	55.00	88.59	109.74	97.07	98.68	167.85	103.26	80.92	3.14	54.67	139.92	102.49	88.23	40.46	88.49	37.07	85.50	76.00
48	ER7c	ExonRegion	0	44.40	41.01	123.81	13.93	74.31	68.34	31.89	43.62	94.73	100.46	35.64	51.64	83.15	91.67	79.44	94.78	129.52	69.73	61.07	13.81	46.63	81.11	79.55	87.68	57.25	77.00	41.15	62.74	87.31