Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C20orf96	Gene	0	30.72	20.42	17.18	22.00	74.82	20.04	28.06	16.20	25.70	21.25	16.60	43.13	41.69	16.90	8.88	11.82	26.71	11.57	6.92	4.76	9.03	21.29	24.78	27.53	12.93	6.37	14.91	2.68	11.64
2	400269	Transcript	0	14.34	1.17	1.45	0.09	9.60	4.69	0.97	4.54	3.52	2.63	0.74	9.01	4.63	5.30	8.35	1.66	13.13	3.82	5.92	1.81	2.52	1.60	1.22	6.53	2.96	0.97	0.69	0.03	1.24
3	360321	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	382369	Transcript	0	11.50	10.49	17.89	37.54	107.28	15.68	22.29	9.58	13.21	14.68	8.24	19.43	23.41	5.92	2.28	6.73	9.14	4.47	3.99	5.31	5.53	14.47	10.44	11.49	7.14	1.64	6.61	0.00	6.31
5	IG9_AR2	ActiveIntergenicRegion	0	2.02	3.58	3.74	1.69	4.03	1.78	0.47	0.43	5.22	3.40	1.12	1.74	0.69	1.65	2.92	3.21	1.23	2.72	0.38	0.65	0.84	2.97	2.77	4.05	2.53	1.11	0.43	0.77	2.92
6	ER1a	ExonRegion	0	2.52	1.03	2.68	0.00	16.01	4.01	4.53	1.18	4.57	3.70	3.86	4.93	1.45	1.63	0.00	1.59	0.49	0.00	1.65	0.00	1.37	2.51	4.23	0.69	2.23	2.68	6.89	0.00	5.15
7	E1a_E2b	KnownJunction	0	3.01	0.00	0.00	0.00	6.19	0.00	0.00	0.00	6.21	0.00	5.73	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.33	2.27	0.00	3.86	2.02	10.19	0.00	0.00
8	E2_Aa	NovelBoundary	0	2.42	0.00	2.32	8.41	48.34	0.00	2.63	0.00	2.68	9.35	1.46	5.36	2.67	0.00	0.00	7.19	1.10	0.00	0.00	0.00	0.00	0.00	4.43	0.00	0.00	1.93	4.08	0.00	0.00
9	ER2a	ExonRegion	0	14.67	16.61	33.22	75.09	201.29	29.80	39.71	14.77	23.93	22.24	13.62	35.15	39.78	9.96	4.55	10.39	17.02	8.94	7.98	3.93	11.06	15.29	14.13	12.63	8.95	3.27	10.69	0.00	12.63
10	E2_Ab	KnownBoundary	0	3.01	0.00	6.10	9.27	40.38	3.64	2.92	4.78	14.62	4.07	2.75	12.38	5.00	3.26	0.00	0.00	2.39	9.25	0.00	0.00	2.05	2.48	4.53	11.19	0.00	0.00	0.00	0.00	1.49
11	ER2b	ExonRegion	0	20.45	5.06	4.39	7.92	22.21	6.62	9.24	9.44	23.20	5.20	9.69	13.71	15.62	17.46	0.00	4.06	5.49	6.94	1.23	4.74	4.52	18.55	8.40	17.66	7.33	1.74	5.15	0.00	4.25
12	E2a_E3a	KnownJunction	0	37.93	7.66	1.02	8.63	0.00	10.32	12.99	22.94	29.39	7.39	7.37	16.17	24.90	26.23	14.35	3.82	10.24	13.87	0.00	7.61	5.78	26.84	0.00	16.03	5.42	3.48	0.00	0.00	5.61
13	E2a_E4a	KnownJunction	0	8.32	4.36	2.57	0.00	13.26	1.57	4.86	4.38	2.50	7.11	2.85	3.70	7.04	1.88	0.00	3.06	1.26	0.00	0.00	6.70	0.00	13.66	6.75	10.35	5.34	0.00	2.53	0.00	0.00
14	ER3a	ExonRegion	0	35.44	17.87	6.51	8.37	17.27	42.30	49.25	19.19	32.56	22.48	27.41	51.71	42.57	17.48	9.49	19.52	25.20	14.32	15.46	8.03	14.61	21.82	10.97	22.30	11.59	5.50	15.06	0.00	19.27
15	E3_Da	NovelBoundary	0	5.43	0.00	5.68	0.00	0.00	0.00	4.81	2.04	4.05	2.04	6.45	5.12	2.83	0.00	0.00	0.00	2.61	0.00	0.00	0.00	0.00	2.09	0.00	0.00	1.67	0.00	0.00	0.00	0.00
16	E3a_E4a	KnownJunction	0	15.51	12.41	12.58	0.00	43.92	10.21	10.07	2.49	26.49	7.35	13.57	32.98	11.40	16.66	0.00	10.40	25.17	13.87	8.09	4.13	2.05	6.37	10.64	24.64	10.49	3.69	21.02	0.00	9.67
17	I3_AR1	ActiveIntronRegion	0	2.67	0.00	4.13	22.29	15.19	0.85	2.51	6.87	1.40	0.00	0.00	0.00	0.81	0.00	0.00	0.00	0.00	2.40	0.00	0.00	0.89	0.00	0.00	1.34	1.78	1.95	1.14	0.00	0.00
18	I3_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	1.66	0.00	0.00	0.00	0.00	1.40	0.58	2.46	1.26	1.45	0.00	0.00	0.50	0.00	0.00	0.00	0.22	0.00	0.00	0.00	0.69	0.00	0.00	0.00	0.00
19	I3_SR2	SilentIntronRegion	0	0.62	0.00	0.00	0.00	0.00	0.79	0.00	0.80	0.65	0.00	0.34	1.15	0.56	0.13	0.79	0.00	0.65	0.32	0.46	0.00	0.62	0.00	0.00	0.00	0.00	0.00	0.26	0.00	0.00
20	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.84	0.00	2.35	2.36	3.01	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER4a	ExonRegion	0	37.59	20.73	25.33	21.20	53.37	23.53	27.78	14.74	23.39	22.01	18.15	50.08	40.99	24.53	12.99	14.10	22.38	13.55	13.43	6.16	9.97	26.69	26.84	29.14	12.62	8.00	19.13	3.90	6.96
22	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E4a_E5a	KnownJunction	0	33.62	25.50	17.59	80.02	82.38	13.74	21.40	18.91	7.77	17.26	19.74	44.94	27.51	20.98	7.77	19.28	18.14	5.39	0.00	11.08	6.10	21.00	20.29	16.45	11.40	6.57	19.08	4.13	3.50
24	E5_Aa	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	1.96	2.63	0.00	0.00	0.00	0.00	1.87	1.97	0.00	0.00	0.00	2.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER5a	ExonRegion	0	39.86	24.36	26.00	42.77	140.96	17.33	27.26	16.18	17.04	25.20	14.13	49.30	42.66	16.75	9.93	15.38	28.80	17.23	7.06	6.38	7.42	29.07	21.47	26.44	14.32	5.25	11.70	7.22	8.62
26	E5a_E6a	KnownJunction	0	32.91	40.62	24.99	10.78	141.03	16.50	38.62	18.66	22.41	16.18	19.30	63.76	35.03	17.57	8.37	35.65	27.55	5.39	16.18	4.05	1.76	25.57	19.95	24.70	15.04	11.93	6.96	2.20	3.93
27	ER6a	ExonRegion	0	70.65	25.49	24.16	31.88	141.13	27.30	45.94	25.26	20.01	39.46	29.24	81.25	63.00	22.65	7.45	17.39	42.30	14.41	5.97	7.00	14.48	32.95	43.43	40.29	18.71	10.04	33.83	3.60	7.25
28	E6_Da	NovelBoundary	0	11.86	0.00	0.00	0.00	14.74	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E6a_E7a	KnownJunction	0	53.62	14.25	30.42	10.14	107.73	35.37	64.48	32.99	50.22	59.40	33.44	101.75	84.55	37.93	9.17	10.17	64.33	13.87	16.18	11.41	11.87	36.46	49.69	63.11	33.49	1.85	20.33	6.47	7.49
30	E7_Aa	NovelBoundary	0	11.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER7a	ExonRegion	0	63.37	34.64	30.25	28.23	96.29	34.65	44.23	30.35	37.91	37.74	27.82	84.41	70.17	30.17	8.40	25.12	51.87	15.99	10.88	7.01	13.72	36.79	48.64	59.65	26.21	10.99	13.76	8.06	19.71
32	E7a_E8a	KnownJunction	0	71.20	43.53	31.82	30.41	140.74	39.10	55.73	33.54	40.56	37.87	22.90	81.41	82.64	31.40	18.94	18.59	57.31	9.25	0.00	8.02	16.61	29.51	54.81	54.55	13.75	16.22	8.55	0.00	24.66
33	ER8a	ExonRegion	0	49.99	35.91	29.86	27.10	100.56	35.36	57.98	29.82	46.46	39.46	29.19	90.55	73.47	33.87	12.74	27.22	53.13	25.74	6.21	7.74	14.40	40.01	71.37	60.78	27.06	9.51	37.08	4.62	22.38
34	E8_Da	KnownBoundary	0	10.62	0.00	1.54	0.00	0.00	4.99	0.00	4.33	8.53	1.76	4.52	13.70	7.13	3.99	0.00	0.00	14.61	4.62	0.00	2.98	1.76	0.00	0.00	5.32	0.00	3.52	0.00	0.00	0.00
35	E8a_E8b	KnownJunction	0	39.05	26.86	23.97	31.28	67.94	30.62	63.91	6.72	51.65	26.00	19.30	64.67	65.63	27.87	26.71	27.00	42.72	38.14	0.00	3.06	7.42	33.98	56.54	40.67	31.79	10.56	20.18	6.60	12.25
36	E8a_E9a	NovelJunction	0	0.00	0.00	0.00	0.00	7.37	0.00	0.00	0.00	0.00	0.00	0.00	2.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	E8a_E10a	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	0.00
38	ER8b	ExonRegion	0	14.34	1.17	1.45	0.09	9.60	4.69	0.97	4.54	3.52	2.63	0.74	9.01	4.63	5.30	8.35	1.66	13.13	3.82	5.92	1.81	2.52	1.60	1.22	6.53	2.96	0.97	0.69	0.03	1.24
39	E8_Ab	KnownBoundary	0	14.81	0.00	2.34	0.00	0.00	1.96	0.00	2.54	6.12	3.56	1.58	11.75	3.22	7.53	7.77	0.00	14.23	4.62	0.00	0.00	3.69	2.43	2.46	8.19	3.45	0.00	0.00	0.00	3.53
40	ER8c	ExonRegion	0	50.80	29.09	32.65	12.65	126.28	30.85	43.87	19.40	41.96	39.26	27.11	75.21	71.51	29.14	20.54	9.32	47.70	12.82	16.45	5.93	17.73	36.37	51.69	54.60	23.57	4.64	25.29	3.21	32.74
41	E8_Db	NovelBoundary	0	46.13	18.23	38.57	34.94	134.99	27.85	43.65	18.96	27.16	23.53	37.83	65.96	49.55	19.12	38.27	3.44	44.34	18.49	40.46	4.13	14.92	43.56	21.33	44.68	20.57	3.18	27.98	6.07	24.99
42	E8_Dc	NovelBoundary	0	28.49	11.05	7.42	0.00	32.57	12.74	8.35	6.92	4.87	7.59	2.47	34.07	13.82	9.97	7.57	18.90	26.34	5.39	0.00	0.00	1.97	2.48	2.51	33.68	7.31	0.00	0.00	0.00	1.95
43	E8c_E9a	KnownJunction	0	12.68	23.37	32.69	68.59	104.63	10.59	26.38	17.42	13.09	26.56	23.47	38.76	52.22	27.61	0.00	3.52	12.58	0.00	0.00	0.00	6.14	27.13	32.31	27.87	9.66	13.60	19.93	1.84	7.49
44	E8c_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	ER8d	ExonRegion	0	26.65	25.28	36.25	46.42	132.99	20.02	34.36	19.77	19.69	25.74	29.13	52.97	60.49	26.86	22.65	5.06	24.22	7.48	11.61	3.30	13.95	40.60	31.76	39.09	16.28	8.47	20.94	2.06	15.11
46	I8	Intron	0	26.16	18.16	7.97	7.77	29.64	13.41	13.25	6.52	17.45	12.93	6.02	36.20	10.33	13.27	14.14	11.43	44.00	9.30	9.00	1.14	7.01	2.73	1.70	32.00	9.29	2.95	2.51	1.89	2.90
47	I8_AR1	ActiveIntronRegion	0	29.04	19.00	8.47	7.57	32.50	13.35	14.20	7.13	19.74	13.84	6.21	39.97	11.70	14.45	15.07	13.37	49.82	10.28	9.50	1.42	7.80	3.10	1.81	33.85	10.82	3.54	2.31	1.48	3.62
48	I8_SR1	SilentIntronRegion	0	17.52	17.12	7.07	10.52	21.41	16.03	10.86	4.88	9.88	11.39	6.25	25.02	5.91	10.05	11.64	4.40	24.01	6.56	6.91	0.00	4.58	1.53	1.52	28.23	3.15	0.58	4.10	3.37	0.00
49	E9_Aa	NovelBoundary	0	36.16	9.31	8.07	0.00	14.30	18.26	11.39	4.23	10.63	9.35	3.23	13.19	2.90	10.30	27.11	7.65	22.46	0.00	0.00	0.00	3.85	1.80	7.19	14.59	3.30	8.75	0.00	0.00	3.73
50	I8_AR2	ActiveIntronRegion	0	1.61	4.79	1.08	0.00	3.53	3.44	3.28	0.31	0.80	0.00	0.79	3.40	0.00	1.78	5.13	0.00	5.59	0.00	7.92	0.00	0.30	0.00	0.00	8.78	3.28	0.59	0.00	4.55	0.00
51	ER9a	ExonRegion	0	37.09	44.42	25.20	27.65	115.96	31.98	51.65	25.74	58.46	36.65	33.13	57.47	86.04	29.24	18.31	16.01	44.88	16.70	2.59	7.79	17.39	31.84	52.52	52.53	26.22	14.29	32.23	6.15	19.50
52	E9a_E10a	KnownJunction	0	28.61	49.83	12.71	37.53	112.59	31.50	57.62	35.18	85.72	37.87	20.12	83.16	97.44	32.90	8.17	13.31	57.58	18.88	8.09	7.77	29.56	31.50	62.30	39.48	26.25	12.62	31.61	1.93	27.07
53	I9_SR1	SilentIntronRegion	0	3.15	0.00	0.00	3.77	0.00	2.15	0.00	1.47	0.63	3.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.89	0.00	0.00	0.00	0.00
54	I9_AR1	ActiveIntronRegion	0	2.14	0.00	0.00	7.31	0.00	0.00	0.00	0.00	1.12	4.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00
55	E10_Aa	NovelBoundary	0	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	6.43	2.04	1.42	1.30	1.24	1.15	0.00	6.58	6.01	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00
56	ER10a	ExonRegion	0	15.37	18.59	7.33	13.43	34.77	8.23	13.26	12.94	25.55	12.08	9.27	23.75	32.71	10.34	7.37	6.14	20.12	9.55	3.67	2.93	4.71	13.87	13.95	17.53	7.07	6.07	9.41	0.70	8.80