Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	OVOL2	Gene	0	0.00	0.00	0.16	2.30	0.12	0.00	13.32	47.51	0.08	0.00	0.00	0.03	0.06	0.06	10.46	0.18	0.04	0.19	3.46	0.00	0.00	0.04	0.31	0.00	0.04	0.93	0.59	0.00	29.23
2	494030	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	486776	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.15	2.55	0.00	0.10	0.00	0.00	0.00	0.00	0.12	0.24	0.00	0.09	0.00	0.00	0.00	0.09
4	483661	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	278780	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.50	9.73	0.00	0.00	0.00	0.06	0.00	0.00	2.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.09	0.00	0.00	0.00	0.00	0.00	5.66
6	462208	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.53	0.03	0.00	0.00	0.00	0.00	0.00	0.00	2.83	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	E1a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I2_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.20	1.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	14.23	0.00	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.56
13	ER3a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.50	9.47	0.00	0.00	0.00	0.18	0.00	0.00	1.63	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.27	0.00	0.00	0.00	0.00	0.00	7.17
14	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	19.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.47
15	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	8.41	9.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	8.75
16	ER4a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	13.03	38.07	0.00	0.00	0.00	0.00	0.00	0.00	9.02	0.00	0.00	0.00	6.80	0.00	0.00	0.00	0.42	0.00	0.00	2.18	0.00	0.00	19.50
17	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	17.97	70.77	0.00	0.00	0.00	0.00	0.00	0.00	29.70	0.00	0.00	0.00	24.28	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	47.08
18	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.62
19	ER5a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.06	0.00	0.00	0.00	0.00	0.00	0.00	5.66	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.03
20	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER6a	ExonRegion	0	0.00	0.00	0.00	0.31	0.00	0.00	24.58	87.41	0.00	0.00	0.00	0.00	0.08	0.00	8.00	0.00	0.00	0.00	5.82	0.00	0.00	0.00	0.00	0.00	0.00	0.92	0.48	0.00	53.54
22	E6_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	45.94	108.74	0.00	0.00	0.00	0.00	1.21	0.00	0.00	0.00	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	3.48	2.53	0.00	55.63
23	ER6b	ExonRegion	0	0.00	0.00	0.25	14.93	3.51	0.00	36.94	121.90	0.00	0.00	0.00	0.00	0.81	0.00	20.04	0.00	0.00	0.00	5.74	0.00	0.00	0.00	1.30	0.00	0.00	5.27	3.15	0.00	82.86
24	E6b_E7a	KnownJunction	0	0.00	0.00	1.17	0.00	0.00	0.00	22.49	124.66	0.00	0.00	0.00	0.00	0.00	0.00	15.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	84.38
25	E6b_E8a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER7a	ExonRegion	0	0.00	0.00	0.47	5.29	0.00	0.00	26.79	97.80	0.25	0.00	0.00	0.00	0.10	0.00	23.02	0.55	0.00	0.57	6.61	0.00	0.00	0.00	0.27	0.00	0.00	1.39	1.35	0.00	59.88
27	ER7b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.36
28	I7_SR1	SilentIntronRegion	0	0.00	0.00	0.08	0.00	0.00	0.00	0.39	1.65	0.03	0.00	0.00	0.00	0.00	0.00	0.74	0.06	0.00	0.00	0.78	0.00	0.00	0.00	0.00	0.00	0.00	0.16	0.04	0.00	3.44
29	I7_AR2	ActiveIntronRegion	0	0.00	0.00	0.41	0.00	0.00	0.00	0.00	5.12	0.00	0.00	0.00	0.00	0.00	0.00	1.35	0.00	0.00	0.00	0.79	0.00	0.00	0.00	0.45	0.00	0.00	0.00	0.00	0.00	6.35
30	I7_SR2	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13
31	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.60	0.88	0.00	0.40	0.00	0.00	0.00	0.00	0.48	0.96	0.00	0.38	0.00	0.00	0.00	0.36
32	E8_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E8a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	Ix_AR1	ActiveIntronRegion	0	0.41	2.71	0.00	2.04	0.00	2.61	0.00	0.22	3.67	5.88	0.89	0.00	2.29	1.16	6.59	0.00	5.04	7.38	5.19	0.00	2.81	0.82	2.13	0.00	0.00	0.00	0.00	0.00	0.67
35	Ix	Intron	0	3.89	7.14	0.77	5.09	2.24	4.88	3.07	2.84	9.85	7.08	2.04	4.13	1.61	2.70	6.27	4.64	11.71	6.55	10.73	1.45	5.92	1.13	0.75	3.01	2.59	2.56	0.99	6.90	4.98
36	Ix_SR2	SilentIntronRegion	0	1.17	1.88	0.00	0.00	7.33	5.84	5.81	6.15	28.68	6.86	3.85	8.82	1.70	1.79	5.77	5.47	14.98	3.21	2.00	0.70	6.44	0.00	2.50	6.86	1.11	0.44	0.00	5.68	10.46
37	Ix_AR1	ActiveIntronRegion	0	4.69	10.41	0.77	9.88	0.75	6.81	5.61	2.41	16.90	8.77	2.31	5.46	1.14	3.38	7.84	9.04	15.00	7.65	13.29	1.96	10.26	1.10	0.32	4.20	5.03	1.11	1.12	6.33	6.66
38	Ix_SR1	SilentIntronRegion	0	3.86	6.79	0.79	4.48	2.32	4.53	2.57	2.81	8.09	6.82	1.93	3.76	1.68	2.62	6.03	3.90	11.08	6.48	10.61	1.39	5.20	1.17	0.77	2.69	2.25	2.87	1.01	7.05	4.53
39	Ix	Intron	1	8.68	16.86	3.17	15.21	8.97	19.88	15.57	4.62	16.28	15.06	6.74	7.08	1.74	9.81	11.95	15.80	33.64	14.23	30.79	8.71	12.92	2.10	2.08	7.62	8.91	3.24	2.93	5.60	8.63
40	Ix_SR3	SilentIntronRegion	0	6.04	26.30	2.74	22.16	10.66	23.99	15.94	4.69	29.14	16.13	6.82	7.85	2.76	8.39	14.54	15.61	38.13	17.08	35.72	7.23	13.49	2.94	2.47	9.57	10.90	3.14	3.67	5.48	11.66
41	Ix_AR3	ActiveIntronRegion	0	5.77	13.02	2.50	17.16	8.77	13.57	14.77	4.96	10.99	10.80	5.34	5.62	2.03	8.59	16.23	10.45	24.56	9.27	25.32	4.60	9.39	3.51	1.62	8.69	6.41	0.71	2.47	3.17	9.29
42	Ix_SR2	SilentIntronRegion	0	4.72	13.36	2.33	10.73	6.07	13.24	12.27	3.97	15.11	12.63	4.99	6.57	2.12	8.18	9.46	9.76	29.72	9.29	22.94	5.81	8.92	1.97	2.20	6.19	8.68	4.96	2.67	4.72	6.92
43	Ix_AR2	ActiveIntronRegion	0	6.57	26.43	2.62	11.05	20.04	8.00	17.07	0.00	14.08	16.01	4.55	8.47	0.38	11.69	12.94	3.49	34.95	11.46	59.64	9.49	17.50	1.76	0.96	1.82	10.64	4.33	1.63	8.98	10.53
44	Ix_SR1	SilentIntronRegion	0	10.73	16.42	4.98	14.05	10.98	18.45	13.98	5.53	15.19	17.64	7.33	7.04	1.43	11.45	13.38	17.62	35.10	16.32	28.23	10.33	12.44	1.79	2.15	7.41	10.16	3.92	2.28	7.57	9.00
45	Ix_AR1	ActiveIntronRegion	0	12.20	14.17	1.35	14.75	5.78	28.92	21.46	3.63	11.44	13.71	8.00	7.65	1.07	9.93	7.11	21.49	35.35	15.05	39.16	11.56	18.34	1.39	1.86	7.47	6.34	1.86	4.07	3.90	6.44
46	Ix	Intron	0	11.99	7.08	21.77	27.00	14.19	17.16	6.07	12.08	5.85	14.29	8.07	5.71	10.60	12.51	6.03	12.97	9.80	27.91	28.19	6.78	15.50	16.68	21.01	9.49	13.53	8.62	11.23	14.03	20.29
47	Ix_AR1	ActiveIntronRegion	0	12.04	7.11	21.86	27.11	14.25	17.22	6.10	12.13	5.88	14.35	8.10	5.73	10.65	12.56	6.05	13.03	9.84	28.03	28.30	6.81	15.56	16.75	21.10	9.53	13.59	8.66	11.28	14.09	20.37
48	Ix	Intron	0	11.57	0.00	2.01	4.30	0.00	2.47	8.47	6.63	3.36	2.60	0.71	0.74	3.90	2.18	5.53	4.05	0.90	19.65	7.67	6.61	3.42	1.08	4.34	2.58	2.57	0.94	0.00	2.93	6.44
49	Ix_AR1	ActiveIntronRegion	0	11.85	0.00	2.03	4.41	0.00	2.53	8.67	6.79	3.41	2.66	0.73	0.76	3.99	2.22	5.67	4.12	0.92	20.12	7.85	6.77	3.49	1.11	4.44	2.64	2.63	0.97	0.00	3.00	6.60
50	Ix	Intron	0	8.31	8.95	2.57	4.99	1.80	9.90	7.15	5.22	6.82	8.91	5.52	4.41	6.08	4.46	6.50	5.80	12.96	7.03	21.66	5.91	9.96	3.15	3.56	5.40	4.64	3.24	4.74	6.62	6.49
51	Ix_AR2	ActiveIntronRegion	0	25.67	20.61	6.95	13.42	5.08	28.15	25.15	14.98	16.73	16.50	11.28	7.79	11.59	11.38	16.11	13.57	19.57	17.66	56.48	16.14	17.84	9.47	11.41	11.86	9.74	6.07	11.90	14.44	14.09
52	Ix_SR2	SilentIntronRegion	0	2.72	4.79	1.20	1.42	0.60	3.94	1.16	1.98	3.60	7.14	3.92	3.49	4.66	2.23	3.71	3.62	11.57	3.60	10.18	2.64	7.84	1.14	0.99	3.58	3.10	2.00	2.41	4.47	4.31
53	Ix_AR1	ActiveIntronRegion	0	1.01	6.21	0.04	7.85	0.00	2.25	0.33	1.76	1.97	1.79	1.76	2.30	1.18	1.80	0.76	0.70	5.14	2.91	7.47	0.91	3.68	0.30	0.01	0.71	1.53	4.96	2.39	1.34	1.77
54	Ix_SR1	SilentIntronRegion	0	0.00	6.79	1.64	2.25	4.79	3.19	0.97	1.06	4.75	1.14	0.82	1.09	2.80	0.55	0.00	0.00	7.42	0.94	10.23	2.68	5.06	0.00	1.74	2.09	2.71	1.16	0.05	0.00	1.03
55	Ix	Intron	0	13.86	34.18	15.21	22.32	58.47	18.76	29.92	8.38	19.33	30.42	27.66	22.45	26.04	16.25	7.47	9.34	20.37	18.99	63.49	9.34	22.88	5.18	31.61	5.67	16.77	17.31	68.86	21.47	7.05
56	Ix_AR3	ActiveIntronRegion	0	14.40	35.49	15.81	23.19	60.75	19.49	31.09	8.70	20.09	31.60	28.70	23.33	27.05	16.88	7.76	9.70	21.15	19.70	65.94	9.71	23.77	5.38	32.84	5.89	17.42	17.99	71.55	22.30	7.33
57	Ix	Intron	0	8.71	38.26	6.04	25.89	6.61	25.44	20.92	1.66	20.49	18.90	11.82	18.93	17.55	16.11	7.04	16.48	10.78	13.04	49.02	31.09	32.83	8.95	22.85	5.83	11.61	9.22	28.93	13.24	7.84
58	Ix_AR1	ActiveIntronRegion	0	8.86	38.95	6.15	26.35	6.73	25.90	21.30	1.69	20.86	19.24	12.02	19.24	17.86	16.40	7.16	16.78	10.96	13.28	49.91	31.65	33.41	9.11	23.26	5.91	11.82	9.39	29.44	13.47	7.96
59	Ix	Intron	0	4.72	10.56	3.08	4.01	1.77	9.67	3.48	2.88	12.28	8.33	5.24	7.34	9.16	5.21	9.38	6.78	21.12	6.60	17.18	4.35	12.71	1.31	4.04	5.41	5.81	4.52	3.34	8.23	10.81
60	Ix_AR4	ActiveIntronRegion	0	2.89	3.19	0.56	1.21	4.93	3.47	1.02	0.31	5.48	2.92	2.80	2.60	3.60	1.83	1.55	3.22	9.05	2.65	17.21	0.93	7.44	0.30	1.83	2.17	2.65	1.32	0.31	5.49	6.64
61	Ix_SR2	SilentIntronRegion	0	5.55	8.65	3.90	3.25	1.74	7.26	2.94	3.37	10.33	7.28	6.14	7.50	7.48	5.90	7.70	6.61	24.81	6.57	14.28	5.32	10.90	1.47	3.33	5.00	6.45	4.79	4.32	7.45	9.68
62	Ix_AR3	ActiveIntronRegion	0	3.99	10.07	2.06	3.81	0.86	12.98	2.99	3.33	8.90	11.06	6.25	9.02	11.40	4.01	16.15	6.81	20.43	8.19	17.88	3.07	13.84	0.77	6.71	7.26	5.75	4.71	0.81	5.44	12.95
63	Ix_AR2	ActiveIntronRegion	0	4.78	20.89	3.70	8.72	1.49	17.87	7.07	2.99	28.33	12.13	2.69	8.44	16.99	6.97	12.17	9.96	21.37	7.17	26.25	4.47	22.36	2.14	5.28	6.66	4.31	6.46	5.20	16.92	15.76
64	Ix_SR1	SilentIntronRegion	0	0.31	12.25	0.94	0.00	0.00	4.07	3.11	0.77	4.54	3.70	1.29	1.80	2.08	2.40	3.27	1.63	5.30	4.21	9.52	7.03	1.75	0.60	0.90	1.93	2.68	0.79	0.61	2.31	4.89
65	Ix_AR1	ActiveIntronRegion	0	3.48	13.72	1.62	4.06	0.00	9.32	4.57	0.63	6.03	8.95	7.87	7.09	3.67	4.09	9.71	6.86	9.77	8.55	16.75	5.25	7.46	1.02	1.83	6.91	15.93	0.89	3.83	3.95	6.77
66	ER9a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00