Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C20orf29	Gene	0	45.63	48.15	86.07	33.78	36.06	51.22	34.10	59.10	50.68	58.33	31.38	37.14	38.37	43.08	34.03	32.18	46.70	48.27	43.91	22.61	32.75	111.16	69.22	57.39	46.00	62.42	28.96	55.83	48.43
2	379573	Transcript	0	3.20	4.85	1.52	0.00	7.47	0.57	1.01	1.28	1.40	2.94	1.31	0.00	1.57	0.71	0.00	0.00	1.34	0.00	0.00	0.00	1.43	6.17	1.21	1.53	0.00	1.44	0.15	2.09	1.74
3	379567	Transcript	0	8.61	0.00	2.67	0.00	0.00	1.96	0.00	4.63	3.14	3.95	0.00	1.87	4.84	3.19	0.00	6.96	1.04	0.00	0.00	4.05	3.77	11.04	4.83	2.39	5.15	9.66	0.00	4.18	7.13
4	455742	Transcript	0	1.52	0.00	1.82	0.27	1.30	2.51	0.91	1.84	0.44	2.01	0.12	0.82	2.38	2.23	2.68	1.96	3.68	2.27	8.60	2.70	1.71	2.27	2.84	0.71	1.55	3.29	0.51	0.45	3.63
5	246041	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	2.14	0.00	0.75	0.00	14.94	1.15	2.02	0.61	0.00	0.00	1.19	0.00	1.52	0.30	0.00	0.00	0.17	0.00	0.00	0.00	2.85	3.00	2.41	0.00	0.00	0.79	0.31	0.00	1.79
7	ER1b	ExonRegion	0	5.26	0.00	6.22	13.30	24.91	4.87	9.71	6.03	2.14	0.00	1.19	1.24	2.60	1.98	0.00	11.73	4.10	4.96	0.00	0.00	3.76	9.83	8.55	0.78	1.69	1.57	1.83	4.00	7.56
8	ER1c	ExonRegion	0	8.10	0.00	7.23	17.06	33.76	7.79	15.90	8.80	4.12	1.28	1.19	3.02	2.89	4.13	0.00	15.47	6.01	5.46	0.00	0.00	5.07	18.43	14.27	2.63	3.49	4.19	2.04	6.34	8.05
9	ER1d	ExonRegion	0	16.97	11.88	65.79	18.68	22.04	22.34	21.28	23.97	20.89	24.22	8.63	25.23	17.78	15.22	8.25	21.13	27.81	24.21	11.97	6.51	18.55	66.08	37.63	13.64	9.73	44.51	7.56	27.48	35.25
10	E1_Da	KnownBoundary	0	19.47	11.73	10.99	8.20	7.37	12.85	4.41	11.89	3.44	10.87	7.88	5.24	4.46	13.56	8.37	15.15	8.64	14.64	8.09	0.00	6.94	69.38	15.91	21.77	5.49	3.78	2.04	15.73	12.64
11	E1a_E2a	KnownJunction	0	8.61	0.00	2.67	0.00	0.00	1.96	0.00	4.63	3.14	3.95	0.00	1.87	4.84	3.19	0.00	6.96	1.04	0.00	0.00	4.05	3.77	11.04	4.83	2.39	5.15	9.66	0.00	4.18	7.13
12	ER1e	ExonRegion	0	37.13	19.89	15.11	11.23	10.67	23.76	7.06	36.79	16.51	19.41	7.74	17.98	15.61	30.71	4.50	16.72	15.13	18.18	8.97	10.29	10.57	107.75	21.89	39.37	15.62	16.73	5.69	14.79	22.60
13	E1_Db	KnownBoundary	0	5.25	0.00	0.00	0.00	0.00	3.72	2.63	4.48	1.67	1.84	1.58	0.00	3.60	3.08	0.00	0.00	2.75	4.62	0.00	0.00	2.05	2.19	4.63	5.86	3.14	1.76	0.00	0.00	3.70
14	E1b_E2a	KnownJunction	0	54.38	26.18	23.82	0.00	0.00	37.83	21.06	62.56	37.49	22.57	7.28	30.21	22.32	38.69	9.57	47.66	20.24	29.03	16.18	21.92	19.49	102.39	22.21	44.20	19.25	18.67	4.17	24.40	32.39
15	ER1f	ExonRegion	0	3.04	0.00	0.77	0.53	2.59	1.58	1.83	1.69	0.88	4.02	0.24	1.64	3.14	2.26	5.37	0.40	2.83	4.55	9.10	2.34	3.42	2.35	3.77	1.41	1.31	4.39	1.01	0.90	3.73
16	E1_Dc	NovelBoundary	0	3.01	0.00	3.39	0.00	25.20	8.82	0.00	1.99	0.00	3.36	3.23	1.36	1.56	3.06	0.00	0.00	1.06	0.00	0.00	0.00	0.00	0.00	11.03	0.00	1.78	0.00	0.00	0.00	4.36
17	E1c_E2a	KnownJunction	0	0.00	0.00	2.87	0.00	0.00	3.45	0.00	1.99	0.00	0.00	0.00	0.00	1.62	2.19	0.00	3.52	4.52	0.00	8.09	3.06	0.00	2.19	1.92	0.00	1.78	2.19	0.00	0.00	3.53
18	I1	Intron	0	3.71	0.40	1.66	0.00	1.21	3.40	1.50	1.60	1.87	2.14	1.33	0.38	1.20	1.63	3.86	0.92	1.11	3.34	1.19	0.68	1.24	2.23	1.12	1.86	1.95	1.95	0.00	0.81	0.50
19	I1_AR1	ActiveIntronRegion	0	2.71	0.00	1.69	0.00	2.47	4.16	0.51	1.39	1.42	2.19	0.30	0.78	2.13	2.17	7.87	1.25	0.75	1.95	2.42	1.39	1.80	3.64	1.83	2.72	1.08	1.98	0.00	0.00	0.34
20	I1_SR1	SilentIntronRegion	0	4.73	0.79	1.64	0.00	0.00	2.70	2.47	1.81	2.33	2.12	2.33	0.00	0.32	1.11	0.00	0.61	1.46	4.72	0.00	0.00	0.70	0.88	0.44	1.05	2.80	1.93	0.00	1.60	0.66
21	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	5.45	0.00	0.00	0.00	1.19	1.56	0.00	0.00	0.00	0.00	0.00	0.00	4.59	0.00	0.00	0.00	0.00	2.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER2a	ExonRegion	0	51.56	30.45	75.90	25.14	27.42	43.27	38.86	60.60	31.93	51.77	26.83	39.29	32.61	56.32	30.25	39.63	49.00	57.18	29.35	24.86	26.07	97.50	70.12	46.84	43.54	62.70	18.84	52.25	52.21
23	E2_Da	NovelBoundary	0	3.01	0.00	1.07	0.00	0.00	1.73	8.70	1.94	1.43	3.60	0.00	0.00	0.00	1.00	0.00	0.00	2.66	0.00	16.18	0.00	1.76	2.19	0.00	5.62	0.00	4.38	0.00	0.00	0.00
24	E2a_E3a	KnownJunction	0	33.27	26.66	172.24	20.71	20.19	43.74	27.23	63.35	38.40	50.89	24.45	41.51	30.57	58.76	34.88	37.71	50.33	46.49	32.37	26.05	10.71	102.29	60.77	61.67	42.81	40.00	6.61	46.37	35.89
25	E2a_E3b	KnownJunction	0	4.25	9.70	2.29	0.00	0.00	0.00	0.00	1.94	2.80	5.87	1.42	0.00	1.62	1.11	0.00	0.00	2.52	0.00	0.00	0.00	0.00	9.33	0.00	3.05	0.00	2.10	0.00	4.18	1.68
26	I2	Intron	0	0.79	1.39	1.13	0.00	0.60	1.86	0.99	1.02	2.03	1.42	0.22	0.53	0.08	0.89	2.60	0.72	2.57	2.53	0.79	0.97	1.23	0.11	0.11	1.45	0.18	0.00	0.23	0.80	0.25
27	I2_AR1	ActiveIntronRegion	0	1.62	0.81	0.00	0.00	1.23	2.43	2.04	1.86	1.99	1.46	0.00	0.00	0.00	0.92	1.16	1.08	1.10	1.95	3.23	2.09	1.08	0.46	0.00	0.54	0.36	0.00	0.00	1.65	0.00
28	I2_SR1	SilentIntronRegion	0	0.52	1.58	1.50	0.00	0.40	1.68	0.66	0.75	2.06	1.41	0.29	0.70	0.11	0.89	3.08	0.61	3.05	2.72	0.00	0.61	1.28	0.00	0.15	1.76	0.12	0.00	0.30	0.53	0.33
29	E3_Aa	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	4.07	0.00	0.00	0.00	0.82	0.00	0.00	1.40	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E3_Ab	NovelBoundary	0	6.84	0.00	44.52	0.00	0.00	16.42	8.47	20.90	12.79	20.13	1.23	16.39	9.78	21.40	0.00	20.35	15.80	0.00	0.00	3.23	10.87	28.20	20.83	7.06	8.87	14.93	0.00	3.32	10.66
31	ER3a	ExonRegion	0	51.44	28.25	147.44	48.26	36.86	44.26	26.61	69.22	31.01	56.60	19.04	43.79	31.70	57.14	24.64	42.52	42.67	47.49	30.78	26.98	20.83	99.87	69.08	54.21	37.16	50.29	8.06	41.08	36.78
32	ER3b	ExonRegion	0	45.85	34.14	110.63	40.82	43.45	37.62	33.71	67.65	34.08	48.72	13.27	40.18	34.60	48.71	33.18	36.81	43.47	63.29	30.94	20.64	22.82	104.06	81.39	40.49	37.20	56.36	13.31	60.19	41.96
33	E3_Da	KnownBoundary	0	55.51	31.61	82.07	28.69	18.72	43.20	50.86	70.62	37.94	51.09	12.69	35.84	31.59	49.08	48.83	25.40	50.42	64.60	8.09	21.34	30.80	149.94	86.63	50.96	51.07	57.03	39.86	55.94	37.07
34	ER3c	ExonRegion	0	52.01	61.02	98.63	39.92	42.01	61.86	38.75	68.20	63.52	70.13	39.38	41.93	45.81	48.04	41.37	35.34	53.89	53.94	55.03	26.52	39.43	128.27	79.58	70.45	56.12	71.91	37.20	65.83	54.81
35	IG24_SR1	SilentIntergenicRegion	0	3.11	6.15	7.06	0.80	5.45	6.34	3.86	5.95	5.55	9.01	3.55	4.58	3.18	7.39	6.30	4.32	9.76	6.41	5.56	2.90	4.71	4.08	5.13	7.86	6.84	7.37	5.70	5.98	8.52