Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C20orf27	Gene	0	55.24	36.59	65.46	38.68	91.49	50.98	41.18	91.37	85.66	65.68	40.10	103.46	124.97	35.41	38.35	27.17	44.96	28.73	62.60	41.64	58.83	150.70	91.30	75.81	35.48	56.94	42.71	155.63	39.41
2	379772	Transcript	0	0.06	0.00	0.27	1.02	0.43	0.06	0.20	0.06	0.00	0.18	0.01	0.32	0.18	0.00	0.00	0.00	0.05	0.02	0.07	1.62	0.00	0.29	0.27	0.73	0.00	0.26	0.62	0.07	0.34
3	399672	Transcript	0	0.12	0.00	0.00	0.01	0.18	1.27	0.00	0.00	0.13	0.57	0.00	0.94	0.00	0.05	0.02	0.38	0.17	0.22	0.54	0.00	0.48	0.20	0.00	0.00	0.00	0.30	0.00	0.19	0.00
4	379765	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	405186	Transcript	0	6.83	2.34	3.70	1.46	12.52	5.31	1.96	7.20	5.21	3.64	2.39	7.82	7.04	2.87	15.82	2.65	9.74	3.80	8.05	4.79	8.93	11.24	3.54	6.54	2.57	4.26	3.14	5.37	3.86
6	217195	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	487464	Transcript	0	1.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.81	0.93	0.84	0.00	0.00	0.00	0.00	2.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.15	0.71
8	399673	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
9	399683	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
10	ER1a	ExonRegion	0	0.06	0.00	0.27	1.02	0.43	0.06	0.20	0.06	0.00	0.18	0.01	0.32	0.18	0.00	0.00	0.00	0.05	0.02	0.07	1.62	0.00	0.29	0.27	0.73	0.00	0.26	0.62	0.07	0.34
11	E1_Ab	KnownBoundary	0	2.30	0.00	5.66	57.16	36.70	3.26	12.02	6.07	1.37	10.15	0.00	8.98	9.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.98	4.33	0.00	0.00	14.81	2.24	3.59	10.56
12	ER1b	ExonRegion	0	16.21	0.00	29.15	139.50	147.53	20.27	29.20	17.84	15.24	30.17	9.19	24.86	37.54	4.58	13.21	31.99	17.00	22.11	14.16	11.24	11.12	61.52	57.45	11.86	2.60	27.89	18.27	81.71	26.98
13	E1_Ac	KnownBoundary	0	10.79	0.00	20.08	116.69	99.33	24.98	19.97	12.04	13.19	29.16	12.65	15.69	29.65	4.85	9.97	35.57	11.59	13.74	8.09	11.33	16.08	71.42	71.95	8.79	0.00	31.11	14.41	78.99	17.43
14	E1_Ad	KnownBoundary	0	0.00	0.00	9.09	0.00	14.74	0.00	0.00	5.08	0.00	0.00	1.61	9.82	7.20	1.13	0.00	3.82	2.77	0.00	0.00	0.00	0.00	4.96	0.00	0.00	0.00	0.00	0.00	6.87	3.96
15	E1_Ae	KnownBoundary	0	5.96	0.00	5.95	10.78	14.59	3.91	2.92	0.00	6.55	8.15	4.84	8.76	12.07	1.13	0.00	0.00	9.77	0.00	0.00	0.00	2.05	7.39	20.09	3.05	1.93	4.38	5.07	15.86	1.68
16	E1_Af	KnownBoundary	0	134.72	38.59	100.43	153.57	435.48	96.38	69.74	90.62	119.22	98.19	40.90	142.59	163.81	20.72	101.45	115.82	68.61	23.12	56.65	53.67	115.32	255.82	277.32	57.84	17.50	97.33	86.77	282.62	72.63
17	ER1c	ExonRegion	0	56.96	5.63	62.68	203.71	292.49	45.76	50.68	42.61	53.61	61.46	26.35	78.63	110.23	14.90	34.40	80.26	43.79	50.29	65.95	20.48	55.63	152.98	156.03	32.88	13.07	56.35	48.93	208.18	49.09
18	ER1d	ExonRegion	0	83.60	15.96	87.68	222.51	377.17	65.59	64.50	63.91	76.40	77.55	36.72	108.32	141.41	19.96	72.01	97.25	56.96	52.63	80.17	33.73	74.38	208.35	205.11	43.02	17.36	73.87	62.01	255.92	62.70
19	ER1e	ExonRegion	0	120.25	30.55	115.46	214.26	486.20	89.22	78.82	90.40	95.39	106.41	47.60	134.57	177.19	25.94	94.09	116.92	77.13	51.04	113.60	54.25	96.00	280.15	279.38	58.30	20.30	96.03	83.88	307.10	77.17
20	ER1f	ExonRegion	0	81.06	30.58	125.71	133.76	394.09	60.79	43.98	73.21	79.05	77.54	39.04	124.93	149.81	19.72	67.31	73.12	82.23	26.99	59.25	46.86	65.46	208.59	192.50	44.31	17.41	78.30	76.69	226.25	64.23
21	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	7.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E1a_E2a	KnownJunction	0	17.70	13.77	83.54	69.67	109.64	17.53	21.91	39.41	27.25	21.57	12.94	79.13	76.46	7.00	16.14	9.03	51.39	18.49	8.09	14.06	25.35	55.96	47.53	31.16	11.48	29.22	43.68	88.83	22.65
23	E1a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER1g	ExonRegion	0	0.24	0.00	0.00	0.02	0.36	0.89	0.01	0.00	0.25	1.14	0.00	0.28	0.00	0.11	0.05	0.76	0.34	0.43	1.08	0.01	0.96	0.41	0.00	0.00	0.00	0.59	0.00	0.38	0.00
25	E1_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.38	0.00	0.00	0.00
26	E1b_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.65	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.97	0.00	1.76	0.00	0.00	0.00	3.85	0.00	2.51	0.00	1.86	0.00	0.00	2.29	0.00
28	ER2a	ExonRegion	0	41.32	14.05	26.76	26.98	24.79	32.30	22.29	73.07	46.67	29.84	13.28	111.89	98.53	22.51	15.96	11.23	31.74	14.84	42.66	23.13	28.94	127.08	41.42	39.91	12.45	29.72	18.42	74.38	25.32
29	E2_Ab	KnownBoundary	0	54.62	12.22	9.47	9.06	11.35	57.78	29.18	109.14	77.23	66.91	25.78	86.20	104.35	25.15	32.49	21.27	22.33	4.62	64.74	44.49	39.63	184.99	44.57	52.34	22.01	46.52	20.33	91.30	39.09
30	E2_Da	KnownBoundary	0	0.00	3.97	2.72	10.78	0.00	1.96	2.92	1.99	2.80	3.40	1.23	6.42	2.90	3.41	0.00	0.00	6.66	0.00	0.00	0.00	10.27	9.58	4.88	14.36	0.00	0.00	0.00	6.69	0.00
31	E2a_E3a	KnownJunction	0	207.69	75.72	49.06	55.86	96.38	208.72	79.01	402.56	290.12	194.06	99.97	238.22	333.54	93.50	95.87	115.13	83.73	85.92	129.48	166.64	193.25	583.46	207.98	224.49	119.91	158.65	72.11	324.63	112.28
32	ER2b	ExonRegion	0	160.76	45.44	34.97	26.81	65.59	160.45	69.43	319.73	203.11	156.49	72.99	203.33	255.40	71.20	62.85	76.20	66.28	67.47	120.69	130.23	151.59	471.52	145.77	157.63	82.74	125.64	45.79	246.41	95.07
33	ER2c	ExonRegion	0	1.46	1.75	1.56	10.63	18.60	5.65	2.10	7.83	5.32	5.70	3.90	7.37	5.02	5.08	2.84	1.69	5.40	1.35	8.69	2.92	19.80	6.68	10.68	6.25	1.79	1.45	1.25	10.93	1.99
34	E2_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	1.80	0.00	0.00	0.00	0.00	9.97	0.00	3.76	0.00	0.00	0.00	3.57	0.00	0.00	0.00	1.82	0.00	0.00	0.00	0.00
35	E2b_E3a	KnownJunction	1	0.00	0.00	0.00	10.35	13.56	3.68	0.00	13.93	2.71	7.19	0.00	11.93	13.41	4.76	0.00	0.00	4.05	0.00	0.00	4.13	10.55	8.12	4.58	5.32	4.96	3.69	0.00	23.18	1.32
36	I2	Intron	0	1.86	1.91	1.98	0.98	6.24	1.82	0.00	1.09	1.82	0.99	0.49	1.32	0.24	1.55	8.06	0.84	2.93	1.51	0.58	0.25	3.32	0.08	0.50	4.13	1.63	0.93	0.08	1.12	0.09
37	I2_AR1	ActiveIntronRegion	0	1.86	1.91	1.99	0.98	6.25	1.82	0.00	1.09	1.82	0.99	0.49	1.33	0.24	1.55	8.08	0.84	2.94	1.51	0.58	0.25	3.33	0.08	0.50	4.13	1.63	0.93	0.08	1.12	0.09
38	E3_Aa	NovelBoundary	0	8.08	0.00	0.00	0.00	7.07	3.99	0.00	0.00	1.19	3.67	0.00	0.00	0.00	3.52	0.00	0.00	3.53	0.00	0.00	0.00	2.01	0.00	2.51	11.25	0.00	2.02	0.00	1.75	1.98
39	ER3a	ExonRegion	0	174.13	92.92	112.83	61.98	172.79	181.00	114.60	340.11	249.08	205.31	121.39	417.65	429.41	114.19	88.94	97.60	141.34	74.30	174.92	133.05	165.84	438.49	269.27	218.54	113.25	135.80	139.13	388.10	141.83
40	E3_Da	NovelBoundary	0	6.02	0.00	1.54	0.00	5.60	1.76	6.87	0.00	0.00	3.67	0.00	1.51	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	2.88	8.11	0.00	2.29	0.00
41	E3a_E4a	KnownJunction	0	224.91	115.76	249.00	107.41	422.81	177.80	158.83	393.20	283.94	248.18	126.19	426.80	386.08	157.64	130.75	97.23	161.84	83.99	226.59	167.96	164.33	536.10	285.80	405.07	145.02	160.28	160.37	537.78	116.93
42	E3a_E4c	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.02	0.00
43	I3_AR1	ActiveIntronRegion	0	1.66	0.65	1.22	0.00	6.85	1.41	0.29	1.35	0.78	0.21	0.00	0.49	0.38	0.28	13.01	0.00	1.16	0.28	0.47	0.22	0.85	0.00	0.19	1.23	0.84	0.01	0.00	0.48	0.00
44	I3_AR2	ActiveIntronRegion	0	2.91	0.73	0.22	0.00	9.70	1.04	0.00	0.65	0.95	1.03	0.00	2.26	0.49	1.14	8.30	0.39	0.37	0.00	1.21	0.46	1.54	0.00	0.19	3.78	1.05	1.15	0.00	1.73	0.00
45	I3_AR3	ActiveIntronRegion	0	5.24	0.00	1.12	0.00	2.21	0.00	0.00	0.41	0.00	0.64	0.00	3.71	0.00	0.10	4.98	2.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.15	0.32	0.00	0.00	3.08	0.00
46	I3_AR4	ActiveIntronRegion	0	1.17	1.15	0.89	0.00	6.17	0.49	0.00	0.00	0.00	2.10	0.00	0.99	0.46	0.75	5.37	0.42	2.97	0.69	1.14	0.96	1.02	0.00	0.00	3.87	0.51	1.12	0.00	0.92	0.00
47	I3_SR2	SilentIntronRegion	0	0.24	0.36	1.14	0.81	14.09	0.62	0.00	0.00	1.46	1.13	0.13	0.56	0.00	0.84	6.60	0.81	3.29	0.87	0.72	0.00	0.81	0.82	1.02	5.40	0.64	0.18	0.00	0.23	0.00
48	E4_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	45.39	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	17.14	3.82	2.48	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
49	ER4a	ExonRegion	0	231.05	139.01	315.59	162.09	482.78	218.12	144.63	475.30	301.20	280.34	210.68	530.29	525.91	170.42	128.53	95.93	195.99	107.01	232.71	186.23	238.12	641.33	338.24	363.78	192.92	227.43	183.56	681.79	143.79
50	E4_Da	KnownBoundary	0	3.01	0.00	2.64	0.00	12.08	0.00	0.00	2.39	5.79	0.00	0.00	11.90	1.62	3.35	43.45	0.00	21.11	0.00	8.09	6.70	1.76	4.08	1.87	10.53	5.23	7.51	0.00	1.66	0.00
51	E4a_E4b	KnownJunction	0	203.56	155.31	250.52	195.85	480.73	202.39	164.89	440.03	235.37	336.10	289.52	520.89	527.02	151.33	117.00	89.73	226.42	99.28	202.09	170.11	197.14	565.03	419.95	361.70	201.47	285.16	254.65	866.59	227.13
52	E4a_E4c	KnownJunction	0	9.97	0.00	0.00	0.00	6.48	0.00	2.92	0.00	2.80	2.04	4.68	1.27	4.55	1.00	0.00	0.00	0.88	0.00	0.00	7.94	5.78	1.90	1.87	5.44	0.00	0.00	4.37	0.00	2.97
53	ER4b	ExonRegion	0	4.84	2.89	3.30	1.77	9.37	5.71	1.59	5.62	5.85	2.99	1.05	7.24	3.94	3.72	16.60	2.98	12.58	2.48	9.43	1.12	11.09	2.98	1.82	8.22	2.88	2.07	1.37	4.58	1.51
54	E4_Ab	KnownBoundary	0	12.74	9.50	0.00	0.00	11.20	0.00	0.00	0.00	7.22	3.87	0.00	7.74	0.00	1.15	0.00	6.73	0.86	0.00	0.00	0.00	1.80	4.33	0.00	10.89	1.78	0.00	5.07	2.07	0.00
55	ER4c	ExonRegion	0	229.77	144.99	241.82	166.87	296.69	236.32	209.26	422.39	328.30	313.50	186.32	505.39	528.47	156.70	149.93	100.67	201.05	112.88	216.72	151.34	240.78	644.73	425.92	336.51	160.16	273.06	204.50	756.03	175.14
56	E4_Db	KnownBoundary	0	12.56	3.49	0.95	0.00	0.00	3.76	2.92	4.73	4.35	0.00	4.14	8.01	10.38	1.09	8.37	0.00	4.95	4.62	16.18	0.00	8.86	15.51	2.27	5.38	1.93	1.63	0.00	1.89	9.97
57	E4b_E4c	KnownJunction	0	163.45	75.43	187.68	148.83	178.02	133.29	129.53	272.32	195.20	163.34	133.09	377.34	424.77	113.33	124.18	77.42	147.10	114.05	129.03	178.80	147.57	498.91	303.43	234.66	68.84	217.02	108.29	564.16	139.22
58	ER4d	ExonRegion	0	10.37	4.74	2.13	0.00	8.52	3.85	2.66	12.47	6.50	5.17	3.72	8.21	5.29	1.94	10.69	4.27	6.26	5.12	16.72	6.03	10.78	12.76	6.52	8.67	2.40	3.59	7.45	4.90	5.15
59	E4_Dc	KnownBoundary	0	7.55	0.00	3.09	0.00	20.63	0.00	0.00	4.53	0.00	1.76	5.88	7.08	5.45	4.32	0.00	6.73	8.08	4.62	0.00	3.80	5.05	15.85	4.38	5.50	3.37	5.58	7.60	4.04	5.02
60	E4c_E4c	KnownJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	1.87	1.69	0.00	0.00	0.00	0.00	5.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	1.42
61	ER4e	ExonRegion	0	8.83	1.79	4.10	1.15	15.68	4.91	2.33	8.78	4.58	4.29	3.72	8.41	10.14	2.02	15.04	2.32	6.89	5.13	6.66	8.46	6.76	19.50	5.26	4.86	2.26	6.46	4.90	6.16	6.20
62	E4_Ac	KnownBoundary	0	5.72	0.00	1.25	0.00	7.22	6.75	5.32	6.17	4.57	1.84	3.23	9.07	1.62	0.00	16.34	0.00	9.43	0.00	16.18	11.58	3.97	11.72	2.51	3.05	0.00	6.22	0.00	2.29	2.64
63	ER4f	ExonRegion	0	143.48	113.59	198.96	98.09	227.88	123.08	116.65	209.63	260.89	172.98	103.39	222.15	337.52	90.97	95.37	68.12	100.65	83.68	180.22	114.74	154.26	410.61	251.36	199.79	89.14	162.01	109.91	429.76	103.57
64	ER4g	ExonRegion	0	8.57	6.57	23.56	29.25	34.87	1.37	6.05	3.68	11.24	4.33	4.76	9.90	14.29	5.44	0.00	2.53	3.01	5.46	9.05	0.00	9.98	21.63	1.81	19.36	4.29	4.71	12.82	21.19	5.37
65	ER4h	ExonRegion	0	4.29	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.19	3.71	5.20	1.81	0.00	0.00	0.00	0.00	0.00	0.00	2.85	1.80	0.00	4.30	2.86	0.00	0.00	3.26	0.00
66	IG18	Intergenic	0	1.10	0.00	0.00	0.00	6.92	0.00	1.30	2.37	0.43	1.12	0.31	1.43	0.50	1.81	5.57	2.24	0.96	0.50	12.34	0.00	1.65	1.39	2.33	4.43	1.29	0.00	0.47	0.00	0.86
67	IG18_AR1	ActiveIntergenicRegion	0	0.94	0.00	0.00	0.00	3.11	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.13	0.00	4.53	0.00	0.00	0.00	0.79	0.00	0.00	0.00	0.00	0.00	0.59
68	IG18_SR1	SilentIntergenicRegion	0	1.12	0.00	0.00	0.00	7.12	0.00	1.36	2.48	0.45	1.17	0.32	1.50	0.52	1.81	5.84	2.34	1.00	0.52	12.74	0.00	1.73	1.46	2.41	4.64	1.35	0.00	0.49	0.00	0.88