Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SFT2D2	Gene	0	98.52	274.47	167.82	145.32	86.32	182.37	62.71	121.10	66.85	258.12	311.80	115.13	149.98	199.53	69.61	102.75	133.06	93.51	112.56	51.68	208.06	126.90	111.07	61.10	168.44	198.83	132.84	96.76	98.13
2	471981	Transcript	0	0.50	0.74	0.77	0.00	0.00	0.84	0.00	0.21	0.00	2.27	0.15	0.58	0.84	1.10	0.49	1.25	0.90	0.65	0.73	0.00	1.08	0.00	0.00	0.00	0.51	1.17	0.00	0.19	0.00
3	367829	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	271375	Transcript	0	68.99	206.19	146.28	81.92	31.62	163.84	30.33	66.51	48.56	272.00	259.65	88.15	104.10	191.18	35.70	80.73	120.35	69.85	98.90	40.04	188.70	88.31	92.87	59.46	135.16	177.25	95.57	80.50	74.19
5	367825	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1b	ExonRegion	0	3.44	2.10	3.44	5.17	8.33	3.20	1.91	1.17	1.34	1.52	1.25	1.17	2.33	1.25	0.00	1.96	2.02	1.32	0.00	0.00	4.33	4.88	0.53	0.00	1.60	2.44	0.85	3.20	0.81
8	E1_Ac	KnownBoundary	0	5.78	0.00	4.58	19.41	0.00	5.18	5.84	2.54	1.89	0.00	0.00	1.51	1.62	0.00	0.00	3.75	0.00	0.00	0.00	0.00	0.00	4.81	0.00	0.00	1.67	4.03	2.48	0.00	0.00
9	E1_Ad	KnownBoundary	0	5.37	18.52	8.97	18.12	49.07	9.78	4.75	5.97	1.89	12.94	17.34	3.01	7.96	7.16	0.00	3.82	4.52	0.00	0.00	0.00	22.18	14.59	4.68	0.00	3.86	2.19	4.08	2.11	4.29
10	ER1c	ExonRegion	0	16.67	21.90	34.29	59.31	82.47	20.93	19.93	12.48	3.99	23.42	40.33	14.29	18.76	21.57	6.85	16.59	16.25	14.25	6.54	2.81	32.49	21.63	13.46	2.39	12.86	33.53	27.88	21.19	16.55
11	ER1d	ExonRegion	0	70.79	134.97	276.84	389.91	252.11	132.63	74.79	85.25	56.45	213.61	267.68	120.85	158.49	122.88	38.80	119.55	148.34	83.93	59.20	34.76	182.03	99.42	118.91	20.53	105.21	281.23	197.95	146.12	134.85
12	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	0.00	5.14	0.00	0.00	3.89	2.04	0.00	0.00	0.00	4.38	0.00	0.00	0.00
13	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E1a_E3a	KnownJunction	0	24.54	106.94	54.96	58.24	13.26	77.43	18.14	65.29	17.94	56.20	29.93	34.16	27.26	50.58	21.93	16.22	25.89	37.24	16.18	7.53	46.61	40.64	30.73	10.41	16.67	55.83	10.34	6.83	28.06
15	E1a_E5a	NovelJunction	0	0.00	0.00	1.42	0.00	0.00	1.96	0.00	2.49	1.40	0.00	1.23	0.00	0.00	0.00	0.00	0.00	2.63	0.00	0.00	0.00	0.00	2.29	2.02	0.00	1.74	0.00	0.00	0.00	0.00
16	E2_Aa	NovelBoundary	0	0.00	0.00	1.00	8.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	1.64	2.48	0.00	5.92	0.00	1.80	0.00	0.00	0.00
17	ER2a	ExonRegion	0	2.01	2.96	3.07	0.00	0.00	1.75	0.00	0.85	0.00	5.58	0.59	0.46	0.37	2.39	1.97	1.48	2.36	0.91	2.94	0.00	2.72	0.02	0.00	0.00	2.02	1.16	0.00	0.75	0.00
18	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.58	5.33	3.56	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	3.52	0.00	1.87	2.99	2.02	0.00	3.52	1.24	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	3.52	0.00	0.00	0.00
20	I2	Intron	0	1.39	1.72	0.40	0.24	0.00	0.37	0.21	0.31	1.72	1.72	0.08	0.40	0.18	0.40	0.19	0.17	0.82	0.66	0.76	0.35	1.75	0.43	0.49	0.15	0.88	0.54	0.00	0.61	0.14
21	I2_SR1	SilentIntronRegion	0	1.39	1.73	0.40	0.24	0.00	0.38	0.21	0.31	1.72	1.72	0.08	0.40	0.18	0.40	0.19	0.17	0.82	0.66	0.76	0.35	1.75	0.43	0.49	0.15	0.88	0.54	0.00	0.61	0.14
22	ER3a	ExonRegion	0	98.11	187.47	39.03	26.14	17.81	174.84	56.14	138.14	53.31	148.91	150.62	70.59	101.13	159.55	37.34	95.56	68.32	80.53	74.91	53.53	220.29	164.42	55.45	51.28	120.56	131.78	47.49	33.80	64.70
23	E3_Da	NovelBoundary	0	5.72	0.00	0.00	0.00	0.00	3.30	0.00	0.00	1.61	7.59	0.00	0.00	1.62	0.00	0.00	3.29	4.70	0.00	0.00	0.00	3.77	0.00	0.00	0.00	1.93	0.00	0.00	6.60	0.00
24	E3a_E4a	KnownJunction	0	142.27	311.02	44.90	45.73	21.52	253.42	152.88	201.85	113.31	348.17	356.21	146.99	237.85	210.07	134.94	250.00	146.83	235.54	169.94	79.56	371.94	163.45	121.01	76.68	222.12	303.19	63.66	104.06	137.70
25	E3a_E5a	NovelJunction	0	0.00	25.40	1.54	0.00	0.00	1.92	0.00	2.49	4.39	24.41	4.43	1.60	5.29	22.16	0.00	7.11	7.90	4.62	8.09	0.00	7.90	4.76	4.73	8.19	3.86	16.69	0.00	2.29	1.65
26	E3a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	1.62	0.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E3a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34	0.00	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	2.98	2.05	0.00	2.41	0.00	0.00	0.00	0.00	2.11	0.00
28	I3	Intron	0	1.88	0.00	0.00	0.00	1.07	0.60	0.00	0.00	1.35	2.53	0.00	0.67	0.00	0.20	0.00	0.54	0.00	0.42	2.80	0.87	0.31	0.39	0.00	0.94	0.00	0.00	0.00	0.36	0.00
29	I3_AR1	ActiveIntronRegion	0	1.89	0.00	0.00	0.00	1.08	0.61	0.00	0.00	1.36	2.55	0.00	0.68	0.00	0.20	0.00	0.55	0.00	0.43	2.82	0.88	0.31	0.40	0.00	0.95	0.00	0.00	0.00	0.36	0.00
30	E4_Aa	NovelBoundary	0	0.00	0.00	1.54	21.14	0.00	1.96	0.00	0.00	5.33	7.75	0.00	0.00	1.34	1.06	0.00	2.91	0.99	0.00	0.00	4.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER4a	ExonRegion	0	108.02	289.57	82.00	36.82	62.85	196.24	113.49	148.29	85.40	364.33	519.70	193.31	229.40	214.15	119.89	158.35	203.17	139.12	140.83	57.95	212.81	123.17	189.55	51.75	198.74	341.52	269.66	185.82	186.58
32	E4_Da	NovelBoundary	0	7.43	13.57	1.54	0.00	0.00	7.06	0.00	2.04	1.49	1.76	1.33	2.56	3.44	9.06	0.00	0.00	8.49	13.87	8.09	7.28	8.18	0.00	0.00	2.75	3.11	0.00	0.00	6.07	3.37
33	E4a_E5a	KnownJunction	0	73.85	320.13	162.12	74.20	221.35	180.25	87.14	172.24	66.87	273.35	441.24	188.04	191.73	197.64	56.61	109.93	182.64	139.99	105.20	46.23	163.73	139.68	188.68	76.20	148.78	324.13	375.12	200.30	175.73
34	E4a_E6a	KnownJunction	0	4.78	0.00	7.03	0.00	0.00	0.00	0.00	2.39	0.00	1.88	10.88	3.13	0.00	1.13	0.00	0.00	0.00	9.25	0.00	0.00	2.01	2.48	4.78	0.00	1.86	0.00	0.00	0.00	0.00
35	I4	Intron	0	9.01	7.55	2.72	3.11	1.32	5.74	1.26	2.80	4.53	6.58	2.94	3.58	0.93	6.42	2.44	3.72	9.75	5.51	6.15	2.70	6.50	1.22	0.15	1.11	4.15	2.30	1.34	4.51	1.81
36	I4_AR1	ActiveIntronRegion	0	13.48	5.97	4.32	3.00	2.18	7.40	1.62	4.09	4.64	9.72	4.22	4.80	0.93	9.74	0.98	4.41	11.79	7.00	5.43	5.34	7.94	2.74	0.29	0.96	6.84	3.19	0.98	7.39	0.89
37	I4_SR1	SilentIntronRegion	0	7.08	8.26	2.03	3.16	0.95	5.03	1.10	2.24	4.49	5.22	2.38	3.05	0.93	4.98	3.08	3.43	8.89	4.87	6.48	1.56	5.88	0.56	0.09	1.17	2.98	1.92	1.50	3.26	2.21
38	E5_Aa	NovelBoundary	0	13.86	25.89	8.00	0.00	0.00	3.45	2.23	0.00	4.75	20.49	7.12	11.96	3.09	9.28	9.97	0.00	21.99	13.87	0.00	3.14	5.58	0.00	0.00	0.00	4.39	0.00	4.37	5.57	0.00
39	ER5a	ExonRegion	0	134.23	370.71	358.71	239.62	231.46	189.25	97.17	216.37	90.58	289.37	368.27	166.60	189.26	236.58	109.76	113.88	157.45	105.24	140.08	70.58	208.37	165.02	126.27	79.15	209.69	269.11	190.66	147.92	129.80
40	E5_Da	NovelBoundary	0	2.42	4.65	3.94	0.00	0.00	0.00	2.69	2.49	0.00	0.00	0.00	0.00	0.00	3.74	0.00	3.82	1.91	0.00	0.00	3.97	3.69	0.00	0.00	0.00	9.36	0.00	0.00	2.29	0.00
41	E5a_E6a	KnownJunction	0	162.92	393.23	367.30	264.87	201.90	190.84	87.71	226.78	95.83	283.73	307.61	111.56	136.64	217.38	159.26	104.11	140.10	32.36	113.07	64.75	224.42	181.29	85.40	74.53	200.75	162.56	157.29	55.31	90.49
42	E5a_E7a	NovelJunction	0	3.01	18.71	6.40	0.00	0.00	7.37	2.92	0.00	0.00	5.67	14.87	0.00	2.93	7.56	0.00	2.75	0.88	0.00	8.09	3.97	14.16	2.48	0.00	0.00	3.64	2.15	0.00	12.81	1.49
43	I5	Intron	0	3.37	3.95	0.94	1.07	0.18	1.70	0.45	0.76	1.39	3.46	2.23	1.46	0.19	3.13	2.79	1.65	3.64	2.41	3.11	2.94	4.60	0.20	0.20	0.73	1.77	0.71	0.21	1.53	0.75
44	I5_AR1	ActiveIntronRegion	0	1.73	4.54	1.82	0.00	0.00	1.94	0.31	1.04	1.76	4.24	0.00	1.46	0.37	4.86	1.30	1.09	4.28	2.85	0.90	5.06	1.85	0.00	0.00	0.00	1.37	0.02	0.52	2.16	0.00
45	I5_SR1	SilentIntronRegion	0	5.60	1.91	1.03	0.38	0.00	1.15	0.73	1.09	1.53	4.89	1.50	2.47	0.00	2.95	0.81	2.91	5.41	4.31	2.08	2.42	3.47	0.00	0.00	0.53	2.67	0.46	0.00	2.25	0.93
46	I5_AR2	ActiveIntronRegion	0	2.45	0.00	0.00	7.31	0.00	3.34	0.00	0.00	1.12	2.89	5.78	3.36	0.00	3.11	0.00	2.53	4.01	0.00	4.53	0.00	0.20	0.00	0.00	2.15	0.00	0.00	0.00	0.00	2.68
47	I5_SR2	SilentIntronRegion	0	2.82	4.71	0.72	1.55	0.30	1.87	0.37	0.57	1.25	2.71	3.00	1.02	0.24	2.84	3.97	1.24	2.76	1.54	4.02	2.72	5.72	0.33	0.33	0.96	1.50	0.97	0.23	1.11	0.83
48	E6_Aa	NovelBoundary	0	5.07	13.09	0.00	21.57	0.00	7.29	0.00	0.00	0.00	5.15	0.00	1.48	0.00	2.33	0.00	0.00	4.75	0.00	0.00	4.13	3.49	0.00	0.00	2.69	1.67	1.97	0.00	1.93	2.05
49	ER6a	ExonRegion	0	157.49	319.73	357.44	331.10	190.41	203.15	86.79	233.41	79.08	265.25	372.87	140.73	179.01	262.92	102.83	114.87	156.94	73.08	122.83	75.73	205.24	193.29	89.71	91.84	222.30	127.78	134.87	69.73	82.99
50	E6_Da	NovelBoundary	0	0.00	0.00	1.25	0.00	0.00	1.57	0.00	0.00	4.35	4.07	0.00	1.20	0.00	0.84	7.97	0.00	2.57	0.00	8.09	0.00	5.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55
51	E6a_E7a	KnownJunction	0	123.04	269.33	173.53	390.83	228.43	201.24	90.69	196.63	67.27	221.70	358.93	139.76	171.83	227.57	97.67	111.61	121.28	119.31	169.94	99.82	198.99	166.51	80.97	99.65	222.01	90.59	101.58	65.69	63.02
52	I6	Intron	0	0.00	3.25	0.00	0.00	0.00	1.61	1.18	0.00	0.66	0.85	2.09	0.73	0.00	0.53	0.00	5.41	0.88	2.26	0.00	1.62	4.18	0.00	0.00	0.00	0.84	0.00	2.15	0.96	0.00
53	I6_SR1	SilentIntronRegion	0	0.00	3.32	0.00	0.00	0.00	1.65	1.21	0.00	0.67	0.87	2.10	0.73	0.00	0.54	0.00	5.54	0.90	2.31	0.00	1.65	4.28	0.00	0.00	0.00	0.86	0.00	2.20	0.98	0.00
54	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	10.14	0.00	0.00	0.00	0.00	0.00	8.15	1.27	0.00	0.00	2.46	0.00	0.00	3.71	0.00	8.09	0.00	5.41	0.00	0.00	0.00	0.00	2.10	0.00	2.07	0.00
55	ER7a	ExonRegion	0	166.54	471.36	189.12	391.78	167.77	296.84	109.16	258.28	99.35	331.82	454.32	176.10	212.36	299.25	113.82	142.36	175.86	173.09	156.87	79.51	256.82	213.27	145.52	98.99	282.16	242.38	178.25	83.91	86.74
56	E7_Da	NovelBoundary	0	11.33	20.65	0.00	0.00	7.07	0.00	0.00	5.03	7.55	11.38	0.00	1.20	0.00	10.17	0.00	6.66	8.40	4.62	8.09	0.00	7.86	0.00	0.00	0.00	1.74	4.38	0.00	2.20	0.00
57	E7a_E8a	KnownJunction	0	158.32	355.61	112.62	199.73	82.09	264.93	88.23	151.29	93.55	297.24	403.15	118.70	196.96	244.41	77.14	117.27	134.81	219.36	97.11	89.32	227.19	173.61	126.67	74.05	250.12	200.80	82.90	84.02	87.98
58	I7	Intron	0	3.73	9.00	1.68	2.65	3.22	3.30	1.49	4.23	2.65	5.68	1.82	2.11	0.44	6.03	2.09	5.72	4.02	5.40	6.57	2.13	5.80	0.67	0.57	1.70	3.81	2.16	0.34	2.62	1.22
59	I7_AR1	ActiveIntronRegion	0	5.25	3.31	1.62	4.30	0.00	2.54	1.95	2.97	2.02	5.35	0.95	1.30	0.53	5.68	2.52	4.68	1.59	5.43	6.17	1.27	4.65	0.43	0.40	0.69	3.07	4.39	0.00	3.03	0.07
60	I7_SR1	SilentIntronRegion	0	3.15	8.35	1.00	2.83	3.73	3.41	1.30	2.97	2.83	5.46	1.52	1.71	0.36	4.37	2.00	5.99	3.99	5.36	6.74	1.71	4.82	0.49	0.39	1.64	3.19	1.48	0.71	1.72	1.30
61	I7_AR2	ActiveIntronRegion	0	2.49	9.34	2.96	0.60	2.91	5.01	0.60	2.91	2.07	5.34	1.99	2.26	0.53	7.34	0.00	2.50	4.43	4.99	5.80	3.36	6.46	1.31	0.54	2.57	3.13	0.63	0.12	1.83	1.22
62	I7_SR2	SilentIntronRegion	0	4.85	14.58	2.10	2.70	4.91	2.24	2.28	9.02	3.24	6.71	2.99	3.48	0.49	8.75	3.70	8.70	5.63	5.81	7.22	2.67	8.24	0.68	1.14	1.89	6.28	3.16	0.00	4.91	1.93
63	E8a_E9a	KnownJunction	0	160.03	412.23	167.68	149.26	79.14	243.60	139.95	228.13	119.56	416.31	476.54	186.74	237.75	268.80	180.38	164.55	185.16	158.74	267.05	105.69	317.39	224.51	173.85	97.08	262.51	197.36	158.58	92.56	142.39
64	ER8a	ExonRegion	0	183.84	425.83	186.04	171.85	85.02	275.30	121.28	227.74	106.21	404.83	513.61	197.32	275.91	319.73	116.68	150.16	209.19	185.22	209.55	106.06	295.36	233.27	174.80	105.19	301.64	248.32	146.10	95.52	145.76
65	E9_Aa	NovelBoundary	0	2.60	3.78	1.52	8.63	0.00	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.09	0.00	5.66	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
66	ER9a	ExonRegion	0	149.80	474.12	219.81	158.91	80.66	281.16	84.54	167.66	105.18	369.01	468.22	157.62	225.30	305.54	117.47	143.55	186.37	136.90	182.64	77.34	325.22	189.01	165.62	97.50	268.32	255.23	177.40	131.09	136.58
67	E9_Da	KnownBoundary	1	98.92	312.67	215.84	130.71	44.51	217.39	40.05	67.08	91.24	309.66	279.90	112.74	130.18	225.31	78.33	118.80	140.98	110.96	169.94	61.45	261.24	114.15	111.75	86.13	147.18	267.70	61.62	111.43	121.13
68	ER9b	ExonRegion	0	68.99	206.19	146.28	81.92	31.62	163.84	30.33	66.51	48.56	272.00	259.65	88.15	104.10	191.18	35.70	80.73	120.35	69.85	98.90	40.04	188.70	88.31	92.87	59.46	135.16	177.25	95.57	80.50	74.19
69	IG24	Intergenic	0	29.66	167.74	92.48	34.31	33.20	103.13	14.43	27.18	41.22	170.39	145.91	50.38	75.19	99.65	21.15	46.45	67.49	53.67	73.63	18.67	124.10	36.98	62.05	35.82	89.68	121.44	88.91	68.78	63.95
70	IG24_AR1	ActiveIntergenicRegion	0	32.42	150.03	77.75	48.34	33.94	140.92	16.45	18.31	33.96	192.13	181.90	41.65	48.75	103.09	12.59	56.32	49.78	55.57	84.04	22.52	148.34	26.14	57.57	34.69	81.57	72.93	88.55	46.67	55.18
71	IG24_SR1	SilentIntergenicRegion	0	34.76	141.14	116.44	34.87	32.61	121.82	20.62	35.45	38.83	191.75	166.63	59.95	74.50	114.07	22.92	62.91	69.37	62.78	68.40	23.86	156.82	41.51	70.51	41.01	94.73	122.57	106.89	67.66	55.15
72	IG24_AR2	ActiveIntergenicRegion	0	35.44	200.11	117.05	29.18	41.84	87.62	13.50	36.33	59.60	179.94	148.83	66.78	118.66	124.52	28.55	46.68	99.78	58.52	74.22	20.72	118.84	49.47	76.07	37.86	110.70	178.46	95.27	110.07	83.25
73	IG24_SR2	SilentIntergenicRegion	0	20.29	161.26	64.51	31.88	25.24	88.94	11.02	18.78	29.22	139.77	114.60	34.57	48.73	67.53	17.66	32.66	45.62	43.51	70.87	12.12	99.75	28.49	46.96	31.81	71.82	92.55	73.84	42.38	55.33