Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ADAMTS4	Gene	0	23.43	60.70	23.38	1.57	3.97	5.89	1.18	2.32	6.35	13.78	6.28	10.91	9.07	26.29	4.26	6.68	7.16	64.51	10.29	2.48	99.35	10.31	29.51	18.56	33.40	10.32	43.72	14.06	10.93
2	367996	Transcript	0	23.93	51.25	30.24	1.52	4.09	6.07	1.01	1.71	6.66	16.04	5.93	13.86	13.31	34.38	1.74	5.55	9.37	87.15	9.16	1.13	113.40	12.40	35.36	22.78	41.98	13.88	41.01	19.50	12.85
3	367995	Transcript	0	3.32	0.81	0.99	0.00	0.89	0.93	0.52	0.19	0.89	1.48	0.36	0.33	0.02	1.21	1.31	0.02	0.77	2.80	2.66	0.96	3.81	0.03	1.21	1.31	1.23	0.43	1.29	0.46	0.04
4	478394	Transcript	0	9.51	4.35	1.07	0.00	0.64	0.13	0.02	0.05	0.18	1.43	1.99	1.37	0.16	1.95	0.00	0.06	1.45	5.69	0.66	0.00	7.33	0.75	1.19	0.28	4.20	1.67	0.47	0.26	0.14
5	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1b	ExonRegion	0	22.83	35.90	20.83	1.38	5.18	5.87	0.29	0.46	2.29	11.51	7.89	8.30	5.86	30.18	1.45	7.87	5.34	66.08	7.70	0.88	98.81	10.12	31.16	10.87	28.01	8.95	38.61	12.41	7.48
7	E1_Da	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.88	4.62	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
8	E1a_E2a	KnownJunction	0	16.87	40.62	21.23	0.00	0.00	7.17	0.00	2.09	5.60	14.58	8.95	11.36	3.41	39.08	0.00	14.61	6.44	87.72	0.00	3.23	101.56	13.37	38.91	19.68	35.38	1.89	35.83	16.49	7.13
9	ER2a	ExonRegion	0	26.45	58.36	31.74	1.13	3.08	9.15	0.36	2.29	4.36	17.36	4.98	9.19	10.00	39.12	1.37	10.54	11.95	91.64	8.27	2.11	122.67	10.43	43.15	19.23	39.47	9.68	36.79	19.42	10.17
10	E2_Da	KnownBoundary	0	2.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.87	0.00	0.00	0.00	0.86	0.00	0.00	4.05	0.00	0.00	3.80	3.77	0.00	0.00	0.00	1.63	0.00	0.00	0.00	0.00
11	E2a_E2b	KnownJunction	0	20.76	45.66	26.63	0.00	5.45	15.08	0.00	0.00	5.73	31.32	0.00	6.78	11.62	39.42	0.00	9.79	19.49	74.75	0.00	0.00	150.25	13.27	38.32	31.28	49.10	10.43	59.59	47.72	20.50
12	ER2b	ExonRegion	0	2.09	1.63	1.53	0.00	1.78	1.36	1.05	0.38	0.48	1.80	0.40	0.05	0.05	1.90	1.92	0.04	1.14	3.60	3.62	1.18	4.59	0.06	2.06	1.18	0.87	0.68	0.56	0.48	0.09
13	E2_Ab	KnownBoundary	0	2.89	0.00	4.04	0.00	6.04	3.49	5.38	0.00	3.05	5.83	5.66	0.00	0.00	3.04	18.54	0.00	0.00	0.00	8.09	3.14	5.86	0.00	0.00	3.05	1.55	0.00	0.00	0.00	0.00
14	ER2c	ExonRegion	0	24.91	48.78	37.45	0.00	2.23	10.92	2.84	1.97	6.18	13.21	7.96	22.47	6.94	50.57	3.78	7.23	10.92	97.40	8.02	2.13	130.53	9.68	50.84	25.24	43.24	16.41	49.49	23.33	13.52
15	E2_Db	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	3.61	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.15	9.97	0.00	0.00	0.00	0.00	0.00	1.48	0.00	2.22	3.05	1.55	2.19	0.00	0.00	0.00
16	E2b_E3b	KnownJunction	0	20.06	90.16	36.40	0.00	0.00	12.89	2.75	4.18	6.49	19.45	19.87	25.12	11.66	64.08	0.00	3.14	14.92	148.85	8.09	0.00	145.00	23.00	47.62	32.06	75.69	28.71	61.62	43.13	18.62
17	ER2d	ExonRegion	0	4.55	0.00	0.44	0.00	0.00	0.50	0.00	0.00	1.30	1.16	0.32	0.61	0.00	0.52	0.70	0.00	0.40	2.00	1.70	0.73	3.03	0.00	0.35	1.45	1.59	0.17	2.03	0.43	0.00
18	E2_Dc	NovelBoundary	0	8.61	0.00	1.54	0.00	0.00	1.96	0.00	0.00	1.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.61	0.00	0.00	2.45	1.74	1.76	0.00	0.00	0.00
19	I2	Intron	0	2.35	2.65	0.00	0.00	1.34	0.38	0.00	0.00	0.00	1.19	0.65	0.00	0.00	0.25	1.26	0.00	0.41	2.64	1.75	0.00	3.91	0.99	0.50	0.00	0.39	0.86	0.50	0.45	0.00
20	I2_AR1	ActiveIntronRegion	0	3.12	3.52	0.00	0.00	0.85	0.32	0.00	0.00	0.00	1.58	0.87	0.00	0.00	0.33	1.68	0.00	0.50	3.51	2.33	0.00	4.41	1.31	0.66	0.00	0.52	1.15	0.67	0.42	0.00
21	E3_Aa	NovelBoundary	0	22.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER3a	ExonRegion	0	9.51	4.35	1.07	0.00	0.64	0.13	0.02	0.05	0.18	1.43	1.99	1.37	0.16	1.95	0.00	0.06	1.45	5.69	0.66	0.00	7.33	0.75	1.19	0.28	4.20	1.67	0.47	0.26	0.14
23	E3_Ab	KnownBoundary	0	33.86	13.86	2.79	0.00	6.63	0.00	0.00	0.00	1.34	0.00	2.47	1.20	0.00	0.00	0.00	0.00	0.00	9.25	8.09	0.00	3.49	2.19	0.00	0.00	1.59	0.00	0.00	0.00	0.00
24	ER3b	ExonRegion	0	30.50	81.43	42.85	0.00	4.22	8.62	1.60	6.39	6.31	25.53	11.80	23.68	12.51	61.23	1.45	10.35	15.51	127.95	13.05	0.83	173.04	15.97	56.93	32.53	65.23	20.33	58.60	35.83	23.60
25	E3_Da	NovelBoundary	0	13.27	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.00	3.69	0.00	0.00	5.74	0.00	0.00	0.00	2.29	0.00
26	E3a_E4a	KnownJunction	0	22.00	97.05	38.79	0.00	5.89	10.28	0.00	2.54	7.13	16.54	11.04	27.80	17.16	71.14	0.00	7.19	11.01	106.21	8.09	0.00	157.91	11.28	59.94	18.78	41.48	20.43	61.23	18.56	12.48
27	I3_AR1	ActiveIntronRegion	0	4.20	2.11	4.01	0.00	0.00	1.50	1.76	0.40	0.85	1.89	4.15	1.61	0.84	0.99	3.40	0.54	0.65	1.33	3.48	0.00	2.18	0.00	0.00	2.34	2.49	0.34	6.39	0.36	0.00
28	E4_Aa	NovelBoundary	0	8.38	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.62	1.76	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	8.09	0.00	3.61	0.00	0.00	2.51	3.86	0.00	0.00	0.00	0.00
29	ER4a	ExonRegion	0	23.61	72.76	39.96	0.00	4.98	7.31	1.48	5.19	7.88	9.24	9.10	26.37	19.42	58.16	3.83	8.06	15.26	124.50	20.97	0.00	116.51	9.95	40.20	22.55	60.32	17.03	63.49	23.28	15.05
30	E4_Da	KnownBoundary	0	23.12	75.82	34.91	0.00	7.22	1.80	2.17	1.94	2.56	8.55	5.57	26.81	19.49	42.58	0.00	11.09	19.20	136.52	8.09	0.00	94.58	4.81	30.88	19.50	65.24	16.05	60.58	11.41	17.43
31	ER4b	ExonRegion	0	23.88	50.59	35.57	0.00	1.47	2.88	0.52	0.06	4.63	13.39	5.95	15.99	9.66	34.56	6.39	4.77	11.24	90.44	4.90	0.63	109.94	14.26	36.78	18.68	39.27	11.15	38.53	18.91	14.53
32	E4_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E4b_E5a	KnownJunction	0	21.35	37.52	31.57	0.00	6.63	3.49	0.00	0.00	4.14	8.91	8.45	7.23	14.27	40.70	0.00	3.82	6.91	120.85	8.09	0.00	119.21	20.37	48.61	11.01	36.26	24.42	46.02	8.31	12.88
34	E5_Aa	NovelBoundary	0	2.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
35	ER5a	ExonRegion	0	18.76	48.01	35.59	3.91	2.21	3.87	1.07	1.98	4.64	11.96	3.72	10.27	12.93	34.70	0.00	3.71	8.96	77.83	9.27	1.13	107.02	12.86	33.63	18.73	33.35	12.34	26.30	11.84	14.96
36	E5a_E6a	KnownJunction	0	22.47	52.35	26.98	0.00	7.37	3.41	0.00	0.00	8.10	16.18	7.24	12.44	24.17	37.44	0.00	5.97	7.92	99.02	16.18	4.13	116.56	12.98	54.22	24.58	29.82	22.40	20.82	16.89	15.55
37	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	E6_Aa	NovelBoundary	0	2.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	3.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
39	ER6a	ExonRegion	0	25.38	53.42	29.58	2.08	3.71	6.12	0.92	2.17	7.26	12.91	6.76	11.28	14.76	36.57	3.18	4.66	9.74	92.50	10.08	1.18	103.45	12.32	34.35	21.30	38.01	11.29	41.25	15.73	10.58
40	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	1.71	0.00	0.00	0.00	0.00	0.00	0.00	3.29	1.28	0.00	0.00	0.00	1.76	0.00	1.92	0.00	0.00	0.00	0.00	0.00	0.00
41	E6a_E7a	KnownJunction	0	40.35	33.74	31.34	0.00	0.00	3.03	2.86	0.00	7.77	8.47	6.26	19.67	21.49	31.55	0.00	7.65	9.77	66.14	16.18	0.00	94.74	9.09	20.54	20.82	63.23	14.59	35.19	17.30	10.17
42	E7_Aa	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.65
43	ER7a	ExonRegion	0	29.59	70.35	41.84	1.83	10.53	8.04	2.04	4.01	7.60	18.08	6.11	16.73	13.57	32.86	3.18	4.93	7.39	102.61	14.40	1.60	122.39	7.70	34.00	23.45	44.27	12.15	42.92	17.28	10.29
44	E7_Da	NovelBoundary	0	6.02	0.00	0.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	2.41	0.00	1.59	0.00	0.00	0.00	0.00
45	E7a_E8a	KnownJunction	0	36.57	38.39	45.64	7.98	7.37	7.40	0.00	4.38	12.64	34.55	0.00	28.49	13.98	40.86	0.00	10.25	9.07	116.36	8.09	0.00	180.62	10.60	47.97	45.76	56.34	7.00	58.30	22.42	11.88
46	E8_Aa	NovelBoundary	0	5.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.45	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	1.60	0.00	0.00	2.87	0.00	0.00	0.00	0.00	0.00
47	ER8a	ExonRegion	0	28.03	94.86	21.78	2.44	4.33	6.59	1.92	3.80	10.97	17.30	6.85	12.28	11.62	19.88	8.08	7.86	7.01	56.48	14.59	4.86	110.61	12.40	28.23	25.68	38.50	12.05	61.55	14.46	14.20
48	IG18_SR5	SilentIntergenicRegion	0	0.52	2.34	0.00	0.00	0.00	0.00	0.00	0.00	1.22	1.05	0.00	0.00	0.47	0.44	0.00	0.60	0.72	2.79	0.77	0.00	3.79	0.44	0.87	0.00	3.80	0.00	8.85	0.00	0.97
49	IG18_AR4	ActiveIntergenicRegion	0	0.00	3.32	0.00	0.00	0.00	0.00	1.04	0.95	0.00	0.74	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.00	0.00	0.00	5.14	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00
50	IG18_SR4	SilentIntergenicRegion	0	0.34	1.97	1.74	0.00	0.00	0.25	0.00	0.00	0.18	1.70	0.19	0.39	1.31	0.26	0.00	0.00	0.38	2.36	0.00	0.00	7.47	0.35	1.01	2.23	1.57	0.49	1.05	0.77	1.05
51	IG18_AR3	ActiveIntergenicRegion	0	0.32	5.16	2.04	0.00	1.53	0.17	0.00	0.00	0.60	1.85	0.36	0.49	0.21	0.53	0.00	1.12	0.76	5.18	0.48	0.00	6.91	1.29	2.14	1.42	2.58	1.18	2.09	1.96	2.52
52	IG18_SR3	SilentIntergenicRegion	0	0.26	3.07	0.99	0.00	1.34	0.72	0.12	0.11	0.52	0.89	0.62	0.89	0.12	1.55	0.43	0.38	0.50	1.33	0.39	0.25	5.06	0.55	0.98	1.06	2.81	1.11	3.53	0.40	1.87
53	IG18_AR1	ActiveIntergenicRegion	0	0.58	4.39	0.46	0.00	1.33	4.90	2.75	0.00	4.45	3.65	9.18	0.84	0.88	0.81	6.53	0.73	1.67	1.58	1.11	0.75	2.72	0.49	0.00	2.98	0.79	0.43	1.00	0.89	0.55
54	IG18_SR1	SilentIntergenicRegion	0	0.22	0.75	0.87	0.00	0.85	2.43	2.10	0.19	5.59	4.74	0.85	0.83	0.34	0.54	4.53	1.92	2.48	0.73	2.07	0.21	0.89	0.50	0.19	2.75	0.25	0.38	1.27	1.07	0.39