Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	BOLA1	Gene	0	43.09	29.35	62.40	5.60	87.85	9.71	88.02	132.91	25.25	32.99	15.32	15.34	26.64	8.92	31.30	15.60	34.62	20.96	24.30	14.65	25.86	79.51	17.69	29.36	27.81	8.16	15.98	2.44	36.45
2	369153	Transcript	0	1.17	0.27	1.17	2.67	4.27	0.34	2.78	2.47	0.92	0.67	0.36	0.55	1.77	0.10	1.35	1.66	0.95	8.39	5.69	3.41	2.34	3.43	0.70	0.55	0.68	1.69	1.11	1.10	1.28
3	369152	Transcript	0	2.24	13.77	40.36	0.00	0.00	0.00	37.25	12.09	1.55	3.71	1.61	0.00	0.00	0.00	0.00	6.58	1.10	0.00	0.00	0.00	7.86	9.19	2.51	0.00	0.00	2.02	0.00	1.93	0.00
4	476344	Transcript	0	0.71	1.64	5.74	0.00	3.68	0.00	1.01	3.10	0.00	6.33	1.31	1.85	1.12	0.83	0.00	0.21	2.12	0.00	0.00	0.23	1.83	1.80	1.03	1.08	0.71	0.00	0.00	0.00	2.57
5	369150	Transcript	0	1.44	3.17	3.46	1.58	6.23	1.06	2.62	4.71	1.02	1.22	0.00	0.00	0.93	0.00	0.19	0.37	1.92	0.85	0.00	0.00	1.12	3.64	0.55	0.09	1.23	0.00	0.35	0.00	3.30
6	IG20	Intergenic	0	0.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.45	0.00	0.00	1.62	0.00	0.37	0.00	0.50	0.00	1.55	0.00	0.00	0.00	0.36	0.00	0.00	0.00	0.00	3.32	0.66	0.67
7	IG20_AR1	ActiveIntergenicRegion	0	0.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.46	0.00	0.00	1.63	0.00	0.37	0.00	0.50	0.00	1.57	0.00	0.00	0.00	0.37	0.00	0.00	0.00	0.00	3.35	0.66	0.68
8	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.11	0.00	0.00	0.00	0.00	0.00	0.07	0.00	0.00	4.92	0.00	40.10	26.27	10.77	0.00	0.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	E1_Da	NovelBoundary	0	106.11	39.75	161.32	1191.91	747.47	14.27	159.74	69.67	21.35	53.73	21.73	44.67	45.03	10.08	65.18	67.32	33.92	57.67	89.02	105.19	69.83	241.43	88.85	21.53	45.16	94.02	57.95	105.18	78.90
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05
11	I1	Intron	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.47	0.00	0.00	0.00	0.00	1.28	0.00	0.00	0.00	0.00
12	I1_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00
13	I1_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.41	0.00	0.00	0.00	0.00	1.26	0.00	0.00	0.00	0.00
14	E2_Aa	NovelBoundary	0	8.02	0.00	13.13	48.32	36.99	0.00	10.64	4.18	2.98	1.80	0.00	8.37	26.78	2.22	8.17	0.00	5.31	4.62	0.00	28.04	4.93	14.63	0.00	5.98	1.93	25.06	10.64	5.53	11.62
15	ER2a	ExonRegion	0	4.12	0.69	0.00	15.30	7.30	0.29	3.54	2.36	1.08	0.92	0.51	1.06	6.50	0.39	5.67	3.20	0.00	8.00	5.59	9.15	5.78	12.29	2.70	2.30	1.53	7.04	3.91	6.61	1.29
16	E2_Da	NovelBoundary	0	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	3.75	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	6.82	0.00	2.09	8.90	0.00
17	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	E2a_E4b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	I2_AR1	ActiveIntronRegion	0	2.23	0.00	0.90	0.00	2.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.03	6.72	0.00	0.00	4.80	0.00	1.15	0.00	0.00	0.00	4.22	0.00
20	I2_SR1	SilentIntronRegion	0	0.39	0.00	0.32	2.48	2.97	0.00	0.70	0.64	0.00	0.25	0.00	0.43	0.22	0.00	0.00	0.00	0.26	3.72	3.91	1.91	0.74	4.69	1.56	1.49	1.02	3.26	12.26	2.88	1.27
21	I2_AR2	ActiveIntronRegion	0	0.31	0.00	0.28	0.00	3.18	0.51	0.00	0.80	0.00	0.00	0.09	0.23	0.00	0.00	1.29	0.08	0.00	0.00	1.19	0.51	0.00	1.35	1.01	0.65	1.57	0.00	0.09	1.76	0.00
22	I2_AR3	ActiveIntronRegion	0	1.13	0.00	0.00	0.00	0.52	0.00	0.00	3.68	0.00	0.00	1.19	0.00	0.00	0.00	5.60	2.53	0.00	0.00	4.05	0.00	0.00	0.00	0.00	2.15	0.38	0.00	0.00	8.15	0.00
23	I2_AR4	ActiveIntronRegion	0	0.44	0.00	0.00	0.00	4.98	0.00	0.00	2.38	0.00	0.00	0.32	0.00	0.00	0.00	0.00	1.49	0.00	0.00	2.40	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	5.27	0.00
24	ER3a	ExonRegion	0	2.87	0.93	5.91	0.74	18.30	1.74	10.47	12.45	2.89	3.11	1.66	2.26	2.06	0.23	2.44	1.87	3.11	2.23	2.30	0.53	2.87	8.19	1.48	1.03	2.56	3.09	2.73	0.00	3.10
25	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E3_Ac	KnownBoundary	0	38.58	14.35	11.14	10.78	219.44	19.30	127.30	159.45	27.65	46.14	22.30	17.08	20.89	3.21	19.93	26.55	0.00	18.49	8.09	4.13	42.24	100.69	17.58	12.20	26.37	17.51	51.98	0.00	35.16
27	E3_Ad	KnownBoundary	0	103.46	14.45	191.15	10.78	453.17	27.55	180.86	238.58	56.98	63.11	14.08	35.54	53.72	4.52	88.50	50.03	119.82	47.78	16.18	23.24	62.01	216.06	71.22	26.68	40.69	7.81	27.43	2.29	70.85
28	ER3b	ExonRegion	0	64.78	16.42	113.95	12.19	348.15	20.31	146.25	209.68	43.82	48.13	22.74	30.65	44.74	5.14	54.14	37.12	65.56	44.27	33.69	14.05	51.03	155.44	36.37	24.38	37.16	15.72	39.68	0.72	60.99
29	ER3c	ExonRegion	0	93.03	24.31	141.21	14.63	452.32	31.07	210.24	267.79	56.51	66.85	26.60	37.11	56.12	5.76	75.89	55.80	78.28	57.31	34.85	18.41	68.25	212.63	55.06	27.43	49.31	18.47	49.36	1.63	77.44
30	ER3d	ExonRegion	0	74.93	31.35	146.58	8.90	359.75	24.53	163.45	172.30	40.10	49.06	13.71	23.07	48.54	3.85	57.95	38.79	78.90	22.55	20.37	15.15	53.27	146.61	42.69	18.14	30.26	13.50	40.45	0.96	76.88
31	E3_Da	KnownBoundary	0	0.00	4.85	18.56	10.78	21.22	0.00	18.48	14.73	1.89	7.67	0.00	0.00	6.27	0.00	0.00	3.44	19.00	0.00	0.00	0.00	8.02	16.38	2.31	0.00	5.04	0.00	0.00	1.75	8.58
32	E3a_E4a	KnownJunction	0	0.00	0.00	1.10	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	5.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.25
33	E3a_E4b	KnownJunction	0	2.24	13.77	40.36	0.00	0.00	0.00	37.25	12.09	1.55	3.71	1.61	0.00	0.00	0.00	0.00	6.58	1.10	0.00	0.00	0.00	7.86	9.19	2.51	0.00	0.00	2.02	0.00	1.93	0.00
34	E3a_E4c	KnownJunction	0	0.00	0.00	7.75	0.00	7.37	0.00	0.00	4.98	0.00	3.99	1.23	3.28	1.59	0.00	0.00	0.00	2.23	0.00	0.00	0.00	2.01	0.00	2.07	0.00	0.00	0.00	0.00	0.00	0.00
35	ER3e	ExonRegion	0	0.41	6.34	6.93	3.15	6.27	0.36	5.25	9.43	2.03	2.44	0.00	0.00	1.86	0.00	0.39	0.74	3.83	1.69	0.00	0.00	2.24	5.04	1.09	0.19	2.46	0.00	0.69	0.00	6.60
36	E3_Db	NovelBoundary	0	2.95	0.00	0.00	0.00	7.37	0.00	2.29	2.54	1.52	1.68	0.00	0.00	0.00	0.93	0.00	3.37	2.05	4.62	0.00	0.00	0.00	9.72	0.00	0.00	1.86	0.00	0.00	0.00	3.40
37	E3b_E4a	KnownJunction	0	2.48	0.00	0.00	0.00	6.19	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	I3	Intron	0	4.88	1.06	0.00	0.00	0.00	2.50	6.43	7.55	1.02	3.94	1.08	0.00	0.00	0.41	7.10	5.65	4.08	1.90	2.91	0.00	1.30	2.46	1.65	3.92	2.60	1.43	0.00	0.00	0.61
39	I3_AR1	ActiveIntronRegion	0	4.97	1.08	0.00	0.00	0.00	2.55	6.54	7.68	1.04	4.02	1.10	0.00	0.00	0.42	7.18	5.75	4.15	1.94	2.96	0.00	1.32	2.51	1.68	3.97	2.65	1.46	0.00	0.00	0.62
40	E4_Aa	NovelBoundary	0	0.00	4.75	0.00	0.00	0.00	0.00	16.42	13.49	6.43	7.51	0.00	2.83	5.25	0.00	8.37	3.37	33.52	4.62	0.00	0.00	0.00	2.24	0.00	0.00	3.86	10.08	16.35	0.00	9.01
41	ER4a	ExonRegion	0	8.06	2.70	7.82	1.52	17.82	1.96	16.82	17.13	3.91	5.33	0.65	1.46	4.51	2.24	3.90	2.41	14.72	7.12	3.45	1.51	7.45	7.33	2.01	2.46	4.23	0.50	4.32	0.00	12.02
42	E4_Ab	KnownBoundary	0	14.33	0.00	17.02	10.14	31.24	3.22	17.11	16.57	5.63	7.87	1.30	3.95	0.00	1.02	9.97	7.19	25.44	5.27	8.09	3.47	9.47	9.48	4.28	2.63	7.20	0.00	20.82	0.00	14.23
43	ER4b	ExonRegion	0	40.90	7.01	32.98	0.97	65.02	7.71	37.48	115.16	12.27	17.99	3.01	8.00	9.41	6.98	22.01	8.53	26.96	13.02	4.21	9.65	18.04	87.68	8.82	19.23	13.29	2.60	7.60	0.00	19.09
44	E4_Ac	KnownBoundary	0	119.09	21.62	38.79	0.00	25.50	33.11	87.25	336.52	42.72	39.59	3.07	8.73	36.97	4.14	51.82	28.84	34.35	36.99	32.15	23.16	50.78	201.18	21.47	47.43	37.62	8.67	17.54	0.00	25.82
45	ER4c	ExonRegion	0	86.44	46.61	127.45	7.67	161.82	16.62	177.91	268.25	42.28	61.16	25.06	32.00	50.65	14.35	59.10	29.63	70.71	37.84	44.75	28.67	36.91	139.78	36.77	46.52	51.84	13.84	20.85	4.35	66.64
46	E4_Da	KnownBoundary	0	105.05	111.88	127.07	9.71	131.46	35.41	176.11	347.76	91.24	102.30	35.34	27.08	64.23	30.02	94.08	39.09	66.47	46.75	80.92	29.03	67.99	187.71	41.32	99.35	74.22	17.25	38.37	2.02	74.64
47	ER4d	ExonRegion	0	112.40	110.48	118.25	1.80	158.80	25.42	214.80	327.42	75.61	96.23	59.34	40.95	80.45	28.93	95.51	39.78	71.07	36.87	80.43	24.61	54.23	200.83	43.21	82.80	86.29	20.71	51.38	3.20	97.53
48	E4_Db	KnownBoundary	0	135.90	78.82	95.55	0.00	116.42	13.58	267.65	351.50	89.62	77.41	64.15	51.17	90.98	27.14	92.48	26.39	72.64	51.12	40.24	22.41	75.81	161.02	35.02	106.65	119.72	22.49	34.19	2.29	107.06
49	ER4e	ExonRegion	0	54.18	68.16	95.12	1.50	80.52	14.56	130.23	198.20	48.63	56.43	33.71	21.06	37.92	19.79	42.21	18.06	40.81	26.44	40.38	19.93	52.01	117.31	20.19	71.15	49.10	9.72	29.76	0.87	56.20
50	ER4f	ExonRegion	0	1.43	3.28	3.74	0.00	0.00	0.00	2.02	1.23	0.00	8.66	1.39	0.41	0.65	1.66	0.00	0.42	2.00	0.00	0.00	0.47	1.66	3.61	0.00	2.15	1.43	0.00	0.00	0.00	5.14