Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	F3	Gene	0	54.68	54.03	8.57	14.50	4.16	13.48	5.83	1.57	5.22	11.93	4.86	5.60	4.06	28.19	20.76	19.29	17.71	53.03	14.39	25.12	48.83	5.72	53.54	79.83	23.30	15.25	31.22	2.92	15.28
2	334047	Transcript	0	44.71	55.22	8.60	21.27	5.33	8.93	5.95	0.48	4.80	9.65	5.05	6.91	8.09	27.50	13.65	21.26	19.16	54.47	22.31	24.80	41.43	7.04	52.26	87.15	27.48	9.69	43.97	1.61	13.69
3	480356	Transcript	0	31.61	6.47	2.64	0.98	0.00	3.89	1.33	0.00	2.85	2.53	1.22	0.90	0.09	6.06	1.27	5.88	4.40	26.35	6.82	5.42	7.95	0.13	1.30	15.56	4.15	3.67	0.38	0.28	1.60
4	370207	Transcript	0	11.80	3.78	0.00	0.00	0.00	1.53	2.86	0.00	0.00	0.00	2.78	0.00	0.00	2.33	0.00	0.00	1.33	0.00	0.00	0.00	3.49	0.00	2.27	2.93	0.00	0.00	13.12	0.00	1.88
5	478217	Transcript	0	3.39	1.34	0.00	0.00	0.00	2.26	0.00	0.00	0.00	0.79	0.00	0.00	0.00	4.12	2.11	0.00	0.82	5.19	3.41	0.00	3.27	0.00	0.99	0.79	2.35	0.00	2.01	0.00	4.47
6	IG41_AR2	ActiveIntergenicRegion	0	0.61	0.82	0.28	0.00	0.00	1.63	0.34	0.16	0.19	0.83	0.00	0.00	0.00	0.38	1.71	0.36	0.46	0.98	0.00	1.57	0.00	1.44	0.00	2.97	0.60	0.68	0.00	0.00	0.28
7	ER1a	ExonRegion	0	2.35	0.00	0.00	3.13	0.00	0.00	0.00	0.00	0.00	0.31	0.00	0.32	0.40	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.47	0.51	0.00	0.41	0.83	0.00	0.00
8	E1_Ab	KnownBoundary	0	5.13	0.00	0.00	10.14	0.00	0.00	0.00	0.00	0.00	1.56	0.00	3.04	1.37	0.00	0.00	0.00	1.01	4.62	0.00	0.00	0.00	0.00	2.02	2.39	0.00	1.76	2.29	0.00	0.00
9	ER1b	ExonRegion	0	15.16	5.98	4.38	22.90	0.00	2.87	1.69	0.77	0.00	2.91	0.00	4.33	0.40	4.38	1.93	5.19	4.66	24.38	1.34	3.46	11.29	3.77	27.30	9.57	3.05	5.77	4.46	0.00	5.23
10	E1_Ac	KnownBoundary	0	11.03	0.00	1.25	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	2.27	9.25	0.00	0.00	5.98	0.00	8.72	8.79	5.64	1.89	1.94	0.00	3.63
11	ER1c	ExonRegion	0	14.77	9.79	3.24	0.44	0.35	4.07	2.16	0.66	0.06	2.95	0.51	2.15	1.65	7.20	7.50	5.49	2.38	16.16	4.89	9.53	12.28	6.04	22.02	12.52	6.23	1.59	2.07	0.77	3.68
12	E1_Da	NovelBoundary	0	24.18	3.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	3.29	1.31	14.51	0.00	0.00	2.05	2.38	0.00	5.62	0.00	0.00	0.00	0.00	0.00
13	E1a_E2a	KnownJunction	0	3.01	4.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.95	0.00	0.00	0.00	9.25	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
14	E1a_E3a	KnownJunction	0	16.04	19.87	6.73	0.00	5.60	17.30	5.78	2.29	1.58	9.19	0.00	7.26	4.97	12.32	0.00	7.27	7.65	28.38	0.00	22.00	49.34	9.14	56.59	32.54	26.94	8.28	4.47	4.45	15.58
15	I1	Intron	0	19.54	1.05	0.36	0.78	0.00	0.15	0.44	0.40	0.00	0.16	0.00	0.20	0.00	5.35	3.38	1.08	1.62	9.86	2.08	4.71	3.10	0.39	1.77	3.73	0.78	0.85	0.00	0.35	1.31
16	I1_AR1	ActiveIntronRegion	0	18.59	0.88	0.34	0.97	0.00	0.00	0.27	0.50	0.00	0.05	0.00	0.00	0.00	4.64	3.39	0.33	1.92	8.54	0.87	3.87	2.73	0.49	1.75	2.59	0.77	0.64	0.00	0.22	1.58
17	I1_SR1	SilentIntronRegion	0	23.96	1.79	0.46	0.00	0.00	0.78	1.14	0.00	0.00	0.63	0.00	1.04	0.00	8.43	3.42	4.22	0.39	15.62	7.19	8.34	4.71	0.00	1.89	8.60	0.81	1.75	0.00	0.92	0.19
18	E2_Aa	NovelBoundary	0	30.67	4.85	2.44	0.00	0.00	1.96	0.00	4.13	0.00	1.76	0.00	0.00	0.00	7.95	0.00	7.04	5.74	23.12	0.00	3.64	11.03	2.48	0.00	7.06	4.85	4.38	0.00	1.84	4.79
19	ER2a	ExonRegion	0	46.00	2.04	2.02	2.95	0.00	2.67	1.70	0.00	1.06	1.88	1.32	1.43	0.27	8.71	3.81	7.08	6.35	28.18	4.28	8.66	9.93	0.38	3.91	12.58	5.77	4.93	1.13	0.84	1.49
20	E2_Da	NovelBoundary	0	10.91	3.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.02	0.00	3.82	0.00	4.62	0.00	3.39	0.00	2.33	0.00	8.13	0.00	0.00	0.00	0.00	3.80
21	E2a_E3a	KnownJunction	0	45.83	13.28	5.90	0.00	0.00	9.02	2.29	0.00	7.49	5.71	2.34	1.27	0.00	8.51	0.00	10.56	6.87	41.61	16.18	7.61	13.92	0.00	0.00	31.04	6.67	6.09	0.00	0.00	3.30
22	I2	Intron	0	3.23	4.85	0.00	0.00	0.00	0.69	0.00	0.00	0.00	0.00	0.00	0.31	0.00	1.59	1.16	2.49	0.38	3.87	0.00	1.88	1.43	0.45	0.45	3.24	1.08	0.39	0.00	0.00	0.50
23	I2_SR1	SilentIntronRegion	0	3.28	4.93	0.00	0.00	0.00	0.70	0.00	0.00	0.00	0.00	0.00	0.32	0.00	1.61	1.18	2.53	0.38	3.93	0.00	1.91	1.45	0.46	0.46	3.29	1.09	0.40	0.00	0.00	0.51
24	E3_Aa	NovelBoundary	0	2.71	9.70	0.00	0.00	0.00	5.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.50	9.97	7.04	2.48	4.62	0.00	3.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.84
25	ER3a	ExonRegion	0	74.12	39.89	12.17	3.13	4.94	21.18	10.82	1.82	3.64	16.15	7.43	8.24	5.67	46.79	16.70	23.59	28.20	61.80	9.94	30.24	66.62	7.50	97.50	90.19	28.40	28.68	35.22	2.53	28.72
26	E3_Da	NovelBoundary	0	0.00	18.81	0.00	0.00	0.00	1.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	4.62	0.00	7.94	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
27	E3a_E4a	KnownJunction	0	76.45	72.71	14.08	0.00	14.44	13.97	10.64	10.05	5.85	20.57	4.52	0.00	9.90	55.13	17.14	22.03	34.21	28.64	40.46	29.44	65.62	13.13	110.57	74.41	46.67	44.50	42.14	2.16	31.79
28	I3	Intron	0	8.03	2.07	0.05	0.00	0.15	0.55	0.09	0.00	0.06	0.31	0.06	0.19	0.00	2.46	0.14	0.82	0.44	4.40	0.49	0.76	1.92	0.14	0.14	0.70	0.09	0.63	0.20	0.00	0.05
29	I3_AR1	ActiveIntronRegion	0	5.54	0.85	0.18	0.00	0.00	0.12	0.00	0.00	0.00	0.10	0.00	0.24	0.00	2.28	0.00	0.98	0.32	3.54	0.00	1.25	2.28	0.67	0.00	0.57	0.00	0.21	0.00	0.00	0.00
30	I3_SR1	SilentIntronRegion	0	10.93	2.81	0.16	0.00	0.00	0.61	0.33	0.00	0.33	0.66	0.00	0.21	0.00	3.91	0.00	0.26	0.67	5.48	0.53	0.92	1.92	0.18	0.15	1.62	0.12	0.72	0.00	0.00	0.00
31	I3_AR2	ActiveIntronRegion	0	9.98	3.40	0.00	0.00	0.00	0.00	0.25	0.00	0.00	0.00	0.41	0.00	0.00	2.09	0.00	0.22	0.69	4.82	0.37	0.00	2.10	0.00	0.00	0.00	0.00	0.82	0.00	0.00	0.15
32	I3_SR2	SilentIntronRegion	0	5.48	2.73	0.00	0.00	0.00	0.63	0.00	0.00	0.00	0.66	0.00	0.20	0.00	2.13	0.00	0.59	0.19	5.23	0.63	1.16	1.95	0.00	0.12	0.28	0.19	0.41	0.00	0.00	0.00
33	I3_AR3	ActiveIntronRegion	0	7.39	2.29	0.00	0.00	0.87	0.49	0.00	0.00	0.00	0.00	0.00	0.33	0.00	1.02	0.00	0.60	0.03	3.15	1.12	1.47	1.14	0.00	0.54	0.44	0.00	1.29	0.00	0.00	0.00
34	I3_AR4	ActiveIntronRegion	0	9.13	1.26	0.00	0.00	0.96	0.81	0.00	0.00	0.00	0.00	0.00	0.36	0.00	2.44	1.16	1.45	1.09	4.51	0.00	0.54	2.09	0.00	0.45	1.19	0.00	1.33	1.44	0.00	0.00
35	I3_SR3	SilentIntronRegion	0	8.50	0.32	0.00	0.00	0.00	1.08	0.00	0.00	0.00	0.14	0.00	0.12	0.00	2.49	0.32	2.05	0.31	2.83	0.63	0.00	1.81	0.18	0.00	0.84	0.14	0.31	0.54	0.00	0.20
36	E4_Aa	NovelBoundary	0	19.47	0.00	0.00	0.00	0.00	3.22	0.00	0.00	0.00	1.80	0.00	1.45	1.97	3.30	0.00	0.00	0.00	13.87	0.00	4.13	1.97	0.00	0.00	0.00	1.74	2.02	0.00	0.00	0.00
37	ER4a	ExonRegion	0	107.67	67.01	9.93	25.74	3.29	16.62	7.18	2.87	4.16	14.99	6.42	9.54	5.92	53.65	19.29	19.50	27.63	75.38	15.55	42.88	49.37	11.24	89.92	109.72	39.54	25.00	23.08	4.89	24.28
38	E4_Da	NovelBoundary	0	8.85	0.00	1.40	0.00	0.00	3.68	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.17	0.00	0.00	0.00	0.00	0.00	0.00
39	E4a_E5a	KnownJunction	0	161.21	115.95	11.46	28.90	0.00	19.41	5.66	0.00	5.94	19.21	10.00	2.80	9.43	56.94	16.74	27.39	34.78	89.13	32.37	69.30	81.42	23.53	123.52	144.16	49.10	54.07	25.84	0.00	39.68
40	I4	Intron	0	7.16	2.74	0.63	0.00	0.00	0.52	0.21	0.00	0.06	0.40	0.00	0.17	0.13	1.98	0.73	0.94	1.03	1.89	0.11	1.40	1.57	0.25	0.44	2.66	0.89	1.68	0.19	0.00	0.21
41	I4_SR1	SilentIntronRegion	0	4.66	1.79	0.75	0.00	0.00	1.32	0.30	0.00	0.00	0.00	0.00	0.00	0.00	1.92	1.64	1.01	1.10	2.08	0.00	1.64	2.02	1.05	0.62	0.00	0.21	0.74	0.00	0.00	0.00
42	I4_AR1	ActiveIntronRegion	0	11.64	1.93	1.25	0.00	0.00	0.52	0.30	0.00	0.25	0.22	0.00	0.00	0.58	2.69	0.00	1.21	1.47	1.42	0.48	1.04	1.87	0.03	0.19	4.01	0.43	2.14	0.00	0.00	0.60
43	I4_SR2	SilentIntronRegion	0	6.33	3.50	0.32	0.00	0.00	0.18	0.13	0.00	0.00	0.65	0.00	0.32	0.00	1.70	0.65	0.79	0.81	2.01	0.00	1.45	1.25	0.00	0.46	3.24	1.37	1.88	0.35	0.00	0.13
44	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68	0.00	0.00	0.00	4.41	6.98	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	1.55	0.00	0.00	0.00	0.00
45	ER5a	ExonRegion	0	88.92	100.88	16.32	26.16	9.05	21.02	10.38	3.35	5.45	18.81	7.50	11.82	6.62	46.83	26.49	24.52	36.03	97.30	26.63	45.64	70.02	11.83	117.75	143.10	50.00	36.08	48.62	4.54	31.94
46	E5_Da	KnownBoundary	0	64.18	129.23	4.51	8.84	0.00	22.21	12.30	8.56	5.42	12.02	14.96	10.72	8.76	30.09	15.35	23.33	30.61	46.11	16.18	21.92	65.90	4.23	79.14	142.54	29.93	17.08	46.86	0.00	13.47
47	E5_Db	KnownBoundary	0	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.09	0.00	0.00	0.00	9.25	0.00	0.00	6.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.68
48	E5b_E6a	KnownJunction	0	60.17	87.35	7.92	21.57	0.00	10.70	7.38	0.00	8.50	14.14	7.09	14.43	18.66	49.83	23.72	28.99	35.86	79.37	40.46	17.37	53.67	10.65	85.94	121.49	38.34	12.19	46.96	0.00	19.25
49	E5b_E7a	KnownJunction	0	11.80	3.78	0.00	0.00	0.00	1.53	2.86	0.00	0.00	0.00	2.78	0.00	0.00	2.33	0.00	0.00	1.33	0.00	0.00	0.00	3.49	0.00	2.27	2.93	0.00	0.00	13.12	0.00	1.88
50	ER5b	ExonRegion	1	90.16	128.32	8.77	25.14	1.25	23.88	12.85	6.44	8.57	16.78	16.14	14.38	15.10	58.90	25.20	33.69	42.70	98.93	35.92	28.46	82.73	9.69	97.65	166.44	45.11	20.14	72.92	0.00	23.49
51	ER5c	ExonRegion	0	3.39	1.34	0.00	0.00	0.00	2.26	0.00	0.00	0.00	0.79	0.00	0.00	0.00	4.12	2.11	0.00	0.82	5.19	3.41	0.00	3.27	0.00	0.99	0.79	2.35	0.00	2.01	0.00	4.47
52	E5_Dc	NovelBoundary	0	5.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.33	0.00	4.43	9.97	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	8.49	1.78	0.00	0.00	0.00	0.00
53	I5	Intron	0	3.81	1.18	0.83	0.00	0.00	1.49	0.40	0.00	0.00	0.29	0.35	0.30	0.00	1.74	0.46	0.00	0.74	4.00	0.00	0.82	1.83	0.36	0.18	1.49	0.28	1.24	1.45	0.16	0.92
54	I5_SR1	SilentIntronRegion	0	4.34	0.59	0.63	0.00	0.00	0.94	0.58	0.00	0.00	0.53	0.24	0.57	0.00	1.67	0.85	0.00	0.87	4.00	0.00	0.51	1.05	0.47	0.00	0.82	0.00	0.00	1.28	0.30	0.62
55	I5_AR1	ActiveIntronRegion	0	3.23	1.89	1.06	0.00	0.00	2.15	0.19	0.00	0.00	0.00	0.48	0.00	0.00	1.84	0.00	0.00	0.59	4.03	0.00	1.19	2.76	0.23	0.39	2.28	0.62	2.71	1.65	0.00	1.29
56	E6_Aa	NovelBoundary	0	5.49	3.68	0.00	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.68	0.00	0.00	1.24	9.25	0.00	3.80	4.53	0.00	0.00	3.05	0.00	0.00	0.00	0.00	3.96
57	ER6a	ExonRegion	0	73.64	87.95	19.35	29.89	12.36	18.03	9.46	2.39	6.12	19.52	7.83	9.73	7.74	48.05	27.97	38.12	34.42	86.46	22.54	34.27	71.83	8.51	101.99	136.96	47.52	21.48	64.92	3.73	29.59
58	E6_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.06	0.00	0.00	1.19	9.25	0.00	4.13	0.00	0.00	0.00	2.81	0.00	2.19	0.00	0.00	0.00
59	E6a_E7a	KnownJunction	0	87.36	95.01	15.75	51.77	14.30	15.73	12.93	0.00	8.83	13.46	10.31	9.13	13.63	38.13	16.54	37.71	25.50	104.41	48.55	72.36	80.98	16.04	72.89	176.81	50.88	14.38	107.15	4.31	19.54
60	I6	Intron	0	4.50	4.15	0.13	0.56	0.57	0.32	0.00	0.14	0.33	0.67	0.00	0.14	0.38	2.51	0.75	0.84	1.39	2.57	1.12	1.01	0.67	0.07	0.14	2.43	1.06	1.23	0.14	0.00	0.52
61	I6_SR1	SilentIntronRegion	0	5.45	0.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.76	0.00	0.00	0.00	1.14	0.00	0.00	0.00	4.68	0.00	0.00	1.04	0.00	0.00	0.58	0.04	0.00	0.00	0.00	0.61
62	I6_AR1	ActiveIntronRegion	0	5.18	2.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.38	0.00	0.00	0.00	1.11	0.00	4.54	0.00	1.24	0.00	0.00	0.00	0.00	0.00	1.30	1.32	0.00	0.00	0.00	1.11
63	I6_AR2	ActiveIntronRegion	0	3.07	4.97	0.00	0.00	0.00	0.00	0.00	0.09	0.00	0.00	0.00	0.00	0.00	1.48	0.00	1.07	0.62	2.81	0.00	0.67	1.62	0.00	0.00	1.05	1.40	0.77	0.00	0.00	0.66
64	I6_AR3	ActiveIntronRegion	0	3.44	2.26	0.00	0.00	0.00	0.00	0.00	1.53	0.00	0.00	0.00	0.46	0.00	3.93	0.00	1.21	3.07	2.05	0.00	1.35	0.51	0.00	0.00	1.79	1.28	0.00	0.00	0.00	1.34
65	I6_SR2	SilentIntronRegion	0	4.85	4.52	0.19	0.80	0.82	0.46	0.00	0.10	0.47	0.89	0.00	0.18	0.54	2.90	1.08	0.60	1.69	2.51	1.60	1.23	0.48	0.10	0.20	3.02	1.05	1.58	0.20	0.00	0.41
66	E7_Aa	NovelBoundary	0	0.00	12.60	0.00	0.00	0.00	1.88	0.00	0.00	0.00	0.00	0.00	0.00	1.27	1.93	8.37	0.00	3.38	0.00	0.00	0.00	1.76	0.00	1.97	8.37	3.86	0.00	0.00	0.00	0.00
67	I6_AR4	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.08	0.00	2.07	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.59	0.00	0.00	0.00	0.00	0.00
68	ER7a	ExonRegion	0	56.82	78.91	10.52	17.33	5.63	18.70	7.33	1.97	8.69	16.56	6.53	6.22	5.39	33.21	32.39	26.01	20.32	62.20	19.85	32.04	70.66	6.74	62.44	109.42	27.43	17.62	46.77	4.12	18.16
69	E7_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.57	0.00	0.00	1.22	0.00	0.00	1.30	0.00	3.41	0.00	0.00	0.00	0.00	0.00	0.00	7.46	0.00	0.00	0.00	1.74	0.00	0.00	0.00	0.00
70	ER7b	ExonRegion	0	0.05	5.80	0.00	0.00	0.00	0.16	0.00	0.00	0.56	0.80	0.00	0.93	0.00	1.48	0.00	1.49	0.00	0.22	0.00	0.00	0.69	0.00	0.00	0.00	0.64	0.00	0.00	0.00	0.05
71	IG40_SR1	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.40	2.31	2.20	0.00	4.17	0.38	1.46	2.16	3.11	0.29	6.43	0.14	0.87	1.09	9.00	0.61	0.81	0.00	3.04	0.00	1.51	0.00	0.00	0.00	0.00
72	IG40_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.63	0.93	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	0.00	0.00	1.68	0.70	0.00	0.11	0.00	0.70	0.00	0.99	0.00	0.00	0.00	0.00