Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	GADD45A	Gene	0	56.51	36.07	40.15	28.12	14.81	101.69	54.41	7.08	22.79	22.88	8.10	11.87	27.09	36.70	28.24	60.76	20.31	100.32	100.17	202.01	27.42	26.53	51.79	71.80	25.16	26.00	84.38	126.45	50.16
2	370986	Transcript	0	0.00	0.00	0.06	0.44	0.00	0.78	0.00	0.34	0.04	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.73	0.39	0.88	0.52	0.09	0.50	0.39	0.26	0.29	0.00	0.30	0.00
3	451087	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	370985	Transcript	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	3.79	0.00	0.00	0.00	2.19	0.00	3.44	0.00	0.00	0.00	2.98	0.00	0.00	0.00	0.00	1.70	0.00	7.60	7.91	0.00
5	460575	Transcript	0	3.70	0.07	1.58	0.21	0.68	1.39	0.66	0.04	0.30	0.42	0.01	0.10	0.21	0.31	1.43	1.31	0.66	4.82	0.48	2.82	0.22	1.69	0.38	1.44	0.76	0.12	0.13	1.90	0.88
6	484245	Transcript	0	3.43	0.08	1.39	0.92	2.80	2.68	0.85	0.57	0.23	0.48	0.01	0.48	0.13	1.35	2.18	2.24	0.11	4.60	3.00	2.04	1.10	0.57	0.75	1.25	0.73	0.14	0.21	2.54	0.22
7	ER1a	ExonRegion	0	0.00	0.00	0.13	0.89	0.00	0.18	0.00	0.67	0.09	0.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.78	1.77	1.04	0.18	0.99	0.78	0.52	0.57	0.00	0.59	0.00
8	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.97	0.00	0.00	0.00	0.00	1.55	0.00	2.24	0.00	0.00
9	E1_Ac	KnownBoundary	0	0.00	0.00	0.00	9.92	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.84	0.00	0.00	0.00	0.00	0.00	10.67	0.00	2.19	8.91	0.00	0.00	1.76	0.00	4.18	0.00
10	E1_Ad	KnownBoundary	1	32.91	0.00	45.00	10.78	6.48	24.94	34.10	1.94	3.78	13.02	0.00	1.33	11.08	8.66	7.77	42.00	13.60	167.09	40.46	136.12	11.87	14.39	61.56	7.84	0.00	24.98	18.09	162.74	21.36
11	ER1b	ExonRegion	1	0.00	0.00	1.12	14.63	0.00	2.75	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.92	9.05	14.05	0.00	1.80	9.04	0.00	0.00	0.00	0.00	9.78	0.00
12	ER1c	ExonRegion	1	13.24	0.47	22.68	15.15	2.67	10.65	12.24	1.25	2.01	4.95	0.00	0.71	3.94	2.66	1.80	15.27	3.97	75.64	22.79	62.14	5.50	7.92	30.61	4.46	0.71	9.71	10.53	78.42	8.44
13	ER1d	ExonRegion	1	47.95	9.26	37.94	16.02	4.32	42.73	29.06	4.48	6.73	17.05	2.25	6.76	15.88	26.37	15.01	43.12	16.08	102.62	45.19	159.62	14.81	29.05	56.30	33.97	14.69	40.00	33.58	155.72	38.27
14	E1_Da	NovelBoundary	0	2.71	0.00	3.04	0.00	0.00	1.53	0.00	0.00	0.00	0.00	1.17	0.00	0.00	1.75	0.00	0.00	0.97	0.00	0.00	2.98	0.00	0.00	0.00	0.00	0.00	3.78	0.00	0.00	1.88
15	E1a_E2b	KnownJunction	1	76.09	25.69	57.13	21.14	7.07	99.79	45.03	14.38	21.59	19.29	4.84	11.23	37.03	49.39	18.54	46.59	35.27	149.36	64.51	335.76	22.62	38.94	72.20	100.67	26.71	53.34	74.65	351.68	74.51
16	E1a_E2c	KnownJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	3.79	0.00	0.00	0.00	2.19	0.00	3.44	0.00	0.00	0.00	2.98	0.00	0.00	0.00	0.00	1.70	0.00	7.60	7.91	0.00
17	I1	Intron	0	3.99	0.00	1.87	0.00	0.00	1.54	0.00	0.00	0.00	0.54	0.00	0.00	0.00	1.69	0.00	1.85	0.00	2.87	1.19	1.03	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.21	0.00
18	I1_AR1	ActiveIntronRegion	0	4.05	0.00	1.90	0.00	0.00	1.56	0.00	0.00	0.00	0.55	0.00	0.00	0.00	1.71	0.00	1.87	0.00	2.91	1.21	1.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.23	0.00
19	E2_Aa	NovelBoundary	0	2.54	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.46	0.00	3.52	0.00	0.00	0.00	0.00	3.77	0.00	0.00	3.05	1.63	0.00	0.00	0.00	0.00
20	ER2a	ExonRegion	0	3.43	0.08	1.39	0.92	2.80	2.68	0.85	0.57	0.23	0.48	0.01	0.48	0.13	1.35	2.18	2.24	0.11	4.60	3.00	2.04	1.10	0.57	0.75	1.25	0.73	0.14	0.21	2.54	0.22
21	E2_Ab	KnownBoundary	0	5.66	0.00	0.00	8.63	14.15	0.00	7.04	0.00	0.00	0.00	0.00	0.00	0.00	2.28	0.00	3.29	0.00	0.00	0.00	0.00	0.00	4.18	0.00	5.20	0.00	0.00	0.00	4.36	1.32
22	ER2b	ExonRegion	0	115.47	16.46	113.41	30.05	19.29	84.05	59.28	10.61	20.88	25.60	2.89	14.57	36.00	55.21	28.22	58.48	34.75	130.81	41.63	319.67	23.34	42.96	69.39	84.73	35.99	34.56	52.26	218.22	58.40
23	E2_Da	KnownBoundary	0	0.00	4.75	2.99	0.00	0.00	3.88	2.92	0.00	0.00	1.96	0.00	1.54	0.00	0.95	0.00	0.00	1.19	9.25	0.00	0.00	0.00	2.48	0.00	0.00	3.86	0.00	0.00	3.73	1.68
24	E2a_E2c	KnownJunction	0	112.43	26.56	95.52	83.04	29.47	71.48	72.26	17.57	14.86	39.39	2.97	15.30	31.46	52.40	26.11	70.30	31.33	176.46	16.18	319.71	25.79	39.72	62.10	77.76	32.32	33.47	57.90	186.91	62.16
25	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	ER2c	ExonRegion	0	7.40	0.13	3.16	0.42	1.36	2.77	1.32	0.08	0.60	0.84	0.02	0.20	0.42	0.62	2.85	2.62	1.33	9.65	0.97	5.65	0.43	3.38	0.75	2.88	1.51	0.23	0.27	3.80	1.76
27	E2_Ac	KnownBoundary	0	11.15	0.00	0.00	0.00	0.00	3.57	2.57	0.00	0.00	2.04	0.00	1.72	0.00	1.13	8.37	0.00	0.95	14.00	0.00	7.11	0.00	0.00	0.00	2.27	0.00	1.80	0.00	0.00	2.67
28	ER2d	ExonRegion	0	105.36	34.58	77.17	54.75	33.65	84.23	81.72	17.99	27.29	33.70	4.94	17.13	37.54	56.92	38.61	92.64	32.52	183.79	82.40	306.83	27.60	56.35	103.66	84.81	35.08	50.33	55.88	232.63	75.91
29	E2_Db	NovelBoundary	0	2.71	3.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.52	0.00	0.00	0.91	0.00	3.37	0.00	0.00	0.00	4.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	E2c_E3a	KnownJunction	0	92.19	46.54	109.08	8.41	17.24	148.10	105.96	28.96	57.10	54.77	16.48	19.07	43.02	85.70	48.83	139.30	52.18	165.42	121.16	321.29	51.34	86.30	124.01	102.46	71.83	78.02	187.11	354.87	120.57
31	E2_Dd	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER2e	ExonRegion	0	100.74	52.56	103.23	14.63	24.91	129.22	108.85	34.98	49.43	53.42	14.28	14.84	42.87	77.10	39.20	134.13	51.09	188.31	135.77	331.66	44.22	84.73	121.15	124.77	62.89	72.29	166.67	353.72	130.19
33	ER2f	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	I2	Intron	0	4.29	2.65	1.20	2.58	0.00	3.88	1.66	0.09	0.98	0.82	0.24	0.64	0.60	1.74	0.24	6.10	1.23	5.41	4.59	5.54	0.81	0.46	0.37	3.42	2.42	1.29	0.47	1.84	0.82
35	I2_SR1	SilentIntronRegion	0	4.64	0.73	0.95	0.82	0.00	2.19	1.84	0.21	0.94	0.16	0.54	0.14	1.03	1.49	0.00	4.56	0.68	4.82	1.82	5.46	0.65	0.00	0.21	2.69	2.44	0.54	0.00	2.04	0.46
36	I2_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	I2_AR2	ActiveIntronRegion	0	4.07	4.28	1.43	4.09	0.00	5.35	1.53	0.00	1.01	1.37	0.00	1.06	0.25	1.98	0.44	7.47	1.70	5.98	6.98	5.68	0.95	0.86	0.52	4.09	2.44	1.94	0.87	1.70	1.14
38	E3_Aa	NovelBoundary	0	4.95	8.92	1.54	0.00	0.00	14.35	2.63	2.24	3.41	1.76	0.00	1.51	0.00	3.66	0.00	3.52	0.00	9.25	8.09	7.44	3.05	0.00	0.00	7.60	3.26	0.00	0.00	2.29	4.09
39	ER3a	ExonRegion	0	146.93	90.59	93.30	63.08	40.34	213.62	133.41	23.14	49.63	61.38	20.51	31.70	65.56	90.90	72.59	153.42	47.79	217.71	221.33	429.01	61.89	74.96	135.66	200.20	86.88	58.70	231.29	327.98	123.36
40	E3_Da	KnownBoundary	0	181.38	101.41	137.46	88.65	20.19	325.32	162.55	19.16	56.85	75.58	33.22	38.22	76.74	117.85	93.68	187.35	60.41	166.57	250.87	540.36	78.70	61.31	149.92	229.75	110.66	85.44	302.21	339.82	170.35
41	ER3b	ExonRegion	0	64.38	91.91	41.29	48.91	19.77	263.52	104.66	5.15	55.53	37.82	22.09	21.17	52.28	61.00	53.15	106.61	32.35	141.52	261.10	361.34	63.29	22.20	57.77	139.42	33.68	27.18	206.32	128.57	87.54
42	ER3c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00