Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TCEA3	Gene	0	4.17	2.00	2.82	0.86	3.70	4.45	1.56	1.93	3.57	9.62	1.41	1.15	2.78	3.51	2.96	3.63	8.76	1.94	1.26	2.65	1.87	5.06	4.98	21.88	3.89	3.60	2.43	0.59	12.14
2	374601	Transcript	0	3.96	0.82	1.22	2.59	2.53	3.14	0.38	0.55	2.38	5.26	0.79	0.31	2.59	1.02	2.41	4.87	7.24	0.05	0.00	0.70	0.43	2.96	3.10	9.05	2.00	5.67	0.94	0.41	9.76
3	450454	Transcript	0	4.13	1.14	3.47	1.83	0.57	5.31	1.23	1.66	4.99	8.36	0.36	0.86	3.41	2.89	3.94	4.10	6.61	2.44	0.49	3.89	4.89	3.92	5.15	20.88	5.39	2.98	4.18	0.44	17.60
4	461794	Transcript	0	0.10	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.13	0.33	0.00	0.00	0.00	0.00	0.00	0.00	1.25	0.00	0.00	0.00	0.00	0.20	0.00	0.30	0.00	0.35	0.00	0.00	0.15
5	374602	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.61	0.00	0.12	0.00	0.00	0.90	0.00	0.00	0.00	0.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	492271	Transcript	0	0.03	0.01	0.01	0.00	0.00	0.01	0.01	0.01	0.01	0.30	0.01	0.36	0.00	0.31	0.00	0.03	0.73	0.02	0.56	0.02	0.01	0.02	0.04	2.38	0.01	0.03	0.00	0.00	0.10
7	476978	Transcript	0	2.28	0.00	0.94	0.00	0.59	1.56	0.08	0.31	0.05	0.75	0.05	0.89	0.08	0.87	0.44	0.00	1.92	0.08	0.00	0.68	0.06	0.07	0.51	1.29	0.11	0.00	0.00	0.00	0.75
8	ER1a	ExonRegion	0	0.44	0.00	0.39	0.00	5.15	0.85	1.53	0.00	0.00	1.59	0.37	0.00	0.40	0.00	4.06	2.71	0.38	0.19	0.00	0.00	0.00	0.12	1.31	0.82	0.20	2.11	0.00	0.00	3.33
9	ER1b	ExonRegion	0	1.79	0.00	2.37	0.00	9.11	1.93	1.30	0.00	0.89	4.99	0.98	0.00	0.62	1.03	1.12	6.07	7.29	0.67	0.00	0.00	1.32	4.08	4.42	8.74	3.68	1.48	1.07	0.00	6.53
10	E1a_E2c	KnownJunction	0	10.97	0.00	3.09	0.00	0.00	3.91	5.09	0.00	1.31	15.94	0.00	0.00	1.27	2.30	0.00	6.81	3.35	4.62	0.00	0.00	3.85	8.56	4.33	27.69	0.00	0.00	0.00	0.00	9.57
11	E1a_E3b	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	8.58	0.00	0.00	1.56	0.00	0.00	0.00	1.04	0.00	0.00	1.17	0.00	0.00	0.00	0.00	2.38	0.00	8.79	0.00	1.76	0.00	0.00	0.00
12	E1a_E10a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E2_Aa	NovelBoundary	0	2.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.73	4.62	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
14	ER2a	ExonRegion	0	0.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.38	0.98	0.00	0.00	0.00	0.00	0.00	0.00	2.08	0.00	0.00	0.00	0.00	0.61	0.00	0.91	0.00	1.06	0.00	0.00	0.45
15	E2_Ab	KnownBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.79	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00
16	ER2b	ExonRegion	0	2.74	0.00	0.02	0.00	0.00	0.06	0.04	0.00	0.05	1.32	0.00	0.00	0.01	0.50	0.06	0.05	3.11	0.03	0.00	0.00	0.04	0.85	0.60	1.29	0.01	0.00	0.00	0.00	0.10
17	E2_Ac	KnownBoundary	0	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.52	0.00	0.00	0.00	0.00	0.00	0.00	2.61	0.00	0.00	0.00	0.00	2.04	2.51	2.27	0.00	0.00	0.00	0.00	0.00
18	ER2c	ExonRegion	0	9.33	1.32	2.24	0.00	4.02	5.83	4.78	0.24	2.65	22.47	0.90	0.22	1.24	3.25	3.88	11.14	8.50	4.23	0.00	5.98	2.90	10.26	9.54	28.97	5.09	7.30	1.51	0.00	20.07
19	E2a_E3b	KnownJunction	0	12.03	4.85	2.79	0.00	5.60	5.37	2.80	1.94	2.50	14.94	5.98	1.27	0.00	5.21	0.00	13.69	15.44	9.25	0.00	6.62	3.57	9.14	9.06	34.45	4.96	11.63	0.00	0.00	23.57
20	ER3a	ExonRegion	0	0.03	0.01	0.01	0.00	0.00	0.01	0.01	0.01	0.01	0.30	0.01	0.36	0.00	0.31	0.00	0.03	0.73	0.02	0.56	0.02	0.01	0.02	0.04	2.38	0.01	0.03	0.00	0.00	0.10
21	E3_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	1.14	0.00	0.89	0.00	0.00	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	ER3b	ExonRegion	0	11.17	0.75	5.08	0.00	6.55	3.95	1.52	2.74	4.02	14.26	4.55	2.71	3.07	6.14	0.37	9.35	18.98	5.38	0.00	3.96	2.20	16.57	9.33	44.68	8.24	6.80	3.35	2.00	20.44
23	E3a_E4a	KnownJunction	0	8.38	0.00	7.08	0.00	6.34	8.82	5.84	5.08	7.46	22.21	11.77	2.65	8.34	11.17	7.57	15.30	18.23	9.25	0.00	3.89	5.58	21.83	15.37	63.82	6.55	2.02	2.14	6.74	24.40
24	ER4a	ExonRegion	0	10.34	4.93	5.22	6.04	4.33	11.98	9.51	12.85	14.19	36.97	7.81	1.40	8.27	9.45	4.26	17.27	24.30	8.54	8.17	17.41	8.84	11.25	21.07	64.30	12.18	6.80	0.48	3.44	32.07
25	E4_Da	KnownBoundary	0	21.65	13.28	2.69	21.57	7.37	16.73	15.33	9.46	16.78	53.33	2.34	2.98	10.06	10.75	0.00	15.30	30.50	5.39	8.09	3.64	9.83	1.80	26.50	91.04	16.97	18.28	6.86	3.77	36.41
26	ER4b	ExonRegion	0	12.99	5.92	6.72	5.64	27.09	22.31	10.79	6.31	10.63	42.83	2.21	3.96	5.44	12.65	0.00	12.31	23.86	2.76	6.27	8.55	10.52	25.09	12.83	101.53	12.98	15.05	8.76	1.36	38.89
27	E4_Db	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
28	E4b_E5a	KnownJunction	0	11.50	3.78	10.26	0.00	0.00	6.60	2.92	6.62	6.03	28.20	3.16	2.68	6.08	9.42	0.00	3.82	13.37	0.00	0.00	9.92	3.61	13.56	6.16	56.65	8.79	6.44	0.00	0.00	17.76
29	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER5a	ExonRegion	0	6.91	9.80	7.41	10.21	8.38	16.69	4.70	15.66	7.58	25.03	3.72	3.77	9.34	14.27	5.42	14.66	20.78	7.80	3.23	6.47	8.76	16.83	12.28	69.01	12.12	10.53	0.00	2.30	33.17
31	E5_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.99	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
33	E5a_E7a	KnownJunction	0	4.78	27.53	6.80	0.00	13.71	16.61	12.13	11.30	14.25	33.23	6.77	0.00	14.49	12.27	8.37	10.56	34.82	4.62	16.18	6.95	6.46	28.00	23.49	101.45	12.27	9.10	0.00	1.98	58.33
34	ER5b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.61	0.00	0.12	0.00	0.00	0.90	0.00	0.00	0.00	0.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E5_Db	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.16	1.64	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
36	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.01	0.00	0.00	0.00	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
37	I6_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.21	0.31	0.00	0.00	0.22	0.00	0.00	0.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.44	1.93	0.00	0.33	0.22	0.00	0.00	0.00	0.31
38	ER7a	ExonRegion	0	12.04	6.13	7.81	0.00	5.92	17.91	9.18	6.52	10.87	37.73	7.36	3.12	12.45	9.37	6.39	11.88	23.81	4.86	3.73	6.75	5.32	13.22	18.09	72.93	11.91	11.43	6.75	1.22	48.74
39	E7a_E8a	KnownJunction	0	13.63	11.83	8.35	0.00	0.00	14.50	0.00	0.00	9.04	22.29	0.00	2.86	15.00	9.55	24.91	3.82	19.04	4.62	0.00	3.39	0.00	11.81	6.89	39.36	12.65	9.74	6.56	0.00	22.55
40	ER8a	ExonRegion	0	13.16	11.06	6.97	1.92	6.64	7.93	1.06	4.52	7.86	19.17	0.35	3.08	13.79	7.72	18.47	3.91	17.89	4.21	0.00	4.73	2.40	11.35	6.73	51.44	11.81	4.25	7.00	4.06	33.01
41	E8a_E9a	KnownJunction	0	7.73	0.00	2.52	0.00	0.00	2.99	2.92	0.00	7.40	6.83	0.00	0.00	0.00	1.97	0.00	3.06	4.93	0.00	0.00	3.72	1.72	4.96	8.77	13.10	6.93	0.00	0.00	0.00	16.34
42	E8b_E9b	KnownJunction	0	2.54	0.00	0.00	10.35	0.00	8.29	0.00	2.19	2.77	12.22	1.58	0.00	4.74	1.35	0.00	9.18	13.57	0.00	0.00	0.00	1.72	4.52	3.84	12.80	3.52	12.70	1.94	0.00	15.58
43	ER8b	ExonRegion	0	12.86	3.28	4.49	0.00	4.98	2.75	0.00	0.00	6.74	7.22	1.19	1.24	5.20	2.72	5.60	7.59	15.03	0.00	0.00	2.81	0.00	7.21	7.23	22.59	4.29	7.86	1.83	1.63	20.13
44	ER9a	ExonRegion	0	6.43	1.09	4.49	7.31	1.66	9.16	2.02	5.52	5.62	15.40	0.40	1.65	5.63	2.72	13.07	7.59	12.35	1.82	0.00	9.37	4.28	4.21	7.84	34.42	9.53	5.76	0.61	0.54	29.53
45	ER9b	ExonRegion	0	11.38	1.28	7.53	1.54	7.67	8.96	2.57	4.08	10.04	19.57	4.24	3.21	8.39	6.90	13.08	5.44	20.82	3.70	1.07	6.92	1.89	9.67	13.45	49.62	9.23	9.33	10.34	0.00	35.62
46	E9a_E10a	KnownJunction	0	2.71	4.85	12.23	0.00	6.04	3.45	2.92	2.54	11.85	10.83	0.00	1.54	6.91	9.39	0.00	3.75	19.81	4.62	0.00	0.00	0.00	6.66	4.83	43.43	5.04	9.57	0.00	0.00	11.79
47	ER10a	ExonRegion	0	5.85	5.14	7.06	4.97	4.47	4.84	0.38	1.64	7.26	11.96	1.87	1.65	5.93	8.13	12.27	5.03	18.80	3.04	5.11	3.06	1.28	8.38	7.48	36.94	7.25	8.54	3.66	1.13	12.92
48	E10a_E11a	KnownJunction	0	9.02	9.70	5.31	0.00	0.00	8.59	0.00	0.00	10.41	10.91	1.61	6.33	13.72	12.81	0.00	3.06	11.32	0.00	16.18	6.95	2.05	19.30	6.40	40.20	17.31	20.68	19.53	0.00	18.95
49	ER11a	ExonRegion	0	4.47	4.65	4.22	0.00	10.65	8.17	0.00	2.35	6.48	11.05	0.40	3.26	5.16	9.11	0.00	2.57	11.70	1.63	0.88	2.97	3.68	13.30	6.81	25.81	6.23	11.39	9.06	0.00	11.73
50	E11_Da	NovelBoundary	0	2.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	0.00	0.00	1.13	0.00	0.00	4.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
51	E11a_E12a	KnownJunction	0	2.77	0.00	1.05	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
52	E11a_E13a	KnownJunction	0	0.00	0.00	4.01	0.00	0.00	5.56	0.00	0.00	1.55	3.71	0.00	1.17	6.21	5.21	0.00	3.14	3.71	4.62	0.00	0.00	11.15	3.79	0.00	18.42	1.74	3.91	12.67	0.00	12.91
53	I11_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.32	1.44	0.00	0.00	0.00	0.00	0.00	0.00	1.96	0.96	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.62	0.00	0.00	1.18
54	E12_Aa	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	0.00	5.83	0.00	0.00	0.00	1.85	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
55	ER12a	ExonRegion	0	1.78	0.00	0.82	0.00	1.17	1.16	0.16	0.62	0.09	1.51	0.10	0.52	0.16	1.74	0.88	0.00	3.83	0.15	0.00	1.36	0.11	0.14	1.02	2.57	0.23	0.00	0.00	0.00	1.50
56	E12_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	1.52	1.49	0.00	0.00	0.00	8.37	0.00	8.19	4.62	0.00	0.00	0.00	0.00	1.87	2.39	1.52	0.00	0.00	0.00	0.00
57	E13_Aa	NovelBoundary	0	2.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.46	0.00	6.96	2.30	0.00	0.00	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
58	ER13a	ExonRegion	0	2.38	3.46	2.88	0.00	0.60	3.53	0.00	1.13	5.40	7.50	1.03	0.63	1.79	1.65	2.71	2.60	5.44	3.32	1.97	2.48	2.42	2.73	4.01	17.58	3.35	2.27	3.44	1.20	11.61
59	E13_Da	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	1.76	0.00	0.00	3.08	2.04	0.00	0.00	0.00	3.21	0.00	0.00	1.40	0.00	0.00	0.00	0.00	2.19	0.00	5.26	0.00	0.00	0.00	0.00	0.00
60	ER14a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.69	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00