Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP11-38J22.2	Gene	0	218.41	106.37	0.27	278.10	101.70	87.55	203.48	305.93	26.75	168.11	202.40	136.44	205.70	4.86	14.93	2.64	10.10	3.24	5.57	0.00	38.75	40.50	3.54	4.44	0.98	25.75	0.10	0.95	10.90
2	455672	Transcript	0	65.24	36.00	0.13	145.47	51.94	37.75	79.38	71.36	11.58	55.66	48.76	30.23	24.15	1.56	6.25	2.93	0.80	1.01	1.32	0.00	17.43	14.28	0.39	1.12	0.22	2.65	0.00	0.00	1.19
3	436158	Transcript	0	71.23	30.29	0.00	57.58	20.46	18.75	55.97	82.65	5.72	49.20	50.58	31.16	56.42	1.74	4.13	0.00	2.41	1.15	1.92	0.00	10.98	10.42	1.33	0.32	0.00	8.38	0.00	0.28	1.50
4	417522	Transcript	0	243.68	90.62	0.00	76.84	32.34	62.38	175.63	325.70	20.21	161.01	228.84	145.05	207.41	2.27	20.54	2.25	6.23	1.56	12.21	0.00	22.46	50.28	4.02	7.99	0.88	33.73	0.00	0.00	14.04
5	ER1a	ExonRegion	0	181.82	91.98	0.40	434.46	142.41	103.83	227.07	200.24	28.35	154.74	139.59	83.82	67.93	4.48	18.12	8.78	1.18	2.25	1.33	0.00	40.36	41.36	1.17	3.04	0.67	7.95	0.00	0.00	3.39
6	ER1b	ExonRegion	0	549.47	244.94	1.12	1565.23	435.45	288.71	668.18	721.18	72.49	430.78	436.69	314.28	373.04	8.26	42.74	11.72	14.94	5.52	17.22	0.00	107.51	126.90	4.32	11.83	1.34	35.02	0.00	0.00	24.51
7	E1_Da	NovelBoundary	0	79.63	3.78	0.00	217.85	101.83	77.58	144.47	62.85	54.14	23.85	30.72	19.13	30.06	0.89	0.00	0.00	12.76	0.00	0.00	0.00	20.78	6.42	0.00	2.39	0.00	3.52	0.00	0.00	2.05
8	E1a_E2a	KnownJunction	0	398.45	160.74	1.30	1609.93	417.21	175.11	434.78	618.39	43.91	253.02	406.31	369.54	532.85	6.85	32.09	0.00	25.32	4.88	0.00	0.00	64.38	73.75	4.63	8.73	1.74	37.51	0.00	0.00	34.30
9	E1a_E4b	NovelJunction	0	114.84	43.34	0.00	92.75	91.52	40.98	120.44	117.90	8.56	79.53	87.60	49.64	21.02	2.06	38.67	0.00	6.98	0.00	0.00	0.00	5.82	31.80	2.22	5.08	0.00	1.72	0.00	0.00	3.96
10	I1	Intron	0	18.55	14.43	0.04	13.02	9.99	11.63	28.63	24.17	16.30	22.34	15.82	11.31	17.40	0.39	8.28	0.15	5.61	0.27	0.24	0.00	6.29	2.36	0.37	1.94	0.16	0.82	0.05	0.00	1.46
11	I1_SR1	SilentIntronRegion	0	23.45	14.56	0.07	19.56	12.35	14.61	40.17	31.15	19.58	22.81	16.78	11.12	17.51	0.42	10.13	0.15	5.86	0.34	0.28	0.00	7.71	2.91	0.39	2.30	0.07	0.31	0.00	0.00	1.47
12	I1_AR1	ActiveIntronRegion	0	14.04	10.85	0.00	3.54	3.90	9.43	15.77	20.14	14.49	21.79	15.11	15.71	20.88	0.28	6.52	0.00	7.48	0.28	0.00	0.00	3.43	2.18	0.00	1.25	0.38	2.06	0.17	0.00	2.05
13	I1_SR2	SilentIntronRegion	0	19.29	13.14	0.00	0.66	9.96	5.50	17.41	21.09	13.38	12.86	5.95	19.12	15.23	0.91	5.60	0.00	3.73	0.00	0.00	0.00	0.00	7.21	0.00	0.00	0.00	0.00	1.83	0.00	0.00
14	I1_AR2	ActiveIntronRegion	0	17.68	13.14	0.00	0.00	9.96	5.50	16.13	20.25	10.39	11.55	5.95	18.24	14.29	0.91	5.60	0.00	2.00	0.00	0.00	0.00	0.00	7.21	0.00	0.00	0.00	0.00	1.83	0.00	0.00
15	I1_SR3	SilentIntronRegion	0	9.83	16.82	0.00	4.24	8.68	6.09	10.02	10.05	9.69	21.91	14.25	8.38	14.68	0.35	5.09	0.27	3.72	0.10	0.34	0.00	5.06	1.02	0.58	1.62	0.23	1.18	0.03	0.00	1.04
16	E2_Aa	NovelBoundary	0	13.45	0.00	0.00	0.00	0.00	7.33	10.47	21.50	15.20	7.15	4.37	5.75	8.57	0.00	0.00	0.00	1.82	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	ER2a	ExonRegion	0	113.57	78.84	0.24	361.75	67.98	61.93	141.98	285.50	21.72	122.22	198.46	161.79	248.80	2.71	10.61	1.12	9.91	1.04	4.33	0.00	28.70	21.66	1.33	4.38	0.65	10.00	0.00	0.00	11.57
18	E2_Da	NovelBoundary	0	13.86	8.73	0.00	0.00	14.74	1.96	5.15	8.96	4.48	3.52	0.00	3.98	7.96	1.00	0.00	3.82	0.00	0.00	0.00	0.00	2.01	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.00	9.46	0.00	0.00	0.00	3.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E2a_E4b	NovelJunction	0	119.92	48.57	0.00	15.96	0.00	31.15	80.39	235.09	16.96	43.54	28.38	39.37	58.75	0.91	0.00	2.98	2.39	0.00	0.00	0.00	15.36	26.64	0.00	0.00	0.00	0.00	0.00	0.00	2.84
21	E2_Db	NovelBoundary	0	8.20	9.50	0.00	0.00	20.78	1.88	8.64	22.79	6.58	19.69	12.65	3.04	1.59	1.02	8.37	0.00	4.59	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
22	E2b_E4b	KnownJunction	0	5.19	0.00	0.00	0.00	0.00	0.00	0.00	3.93	0.00	0.00	0.00	3.43	4.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER2b	ExonRegion	0	17.68	10.68	0.00	3.05	2.08	6.19	14.11	40.96	2.34	7.58	8.03	11.75	13.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	4.51	0.00	0.00	0.00	1.83	0.00	0.00	0.34
24	I2	Intron	0	11.07	7.04	0.00	5.52	2.15	1.96	5.10	13.56	3.02	12.07	5.23	3.86	1.92	0.00	2.32	0.27	1.97	0.00	0.00	0.00	3.14	0.00	0.20	0.95	0.00	0.00	0.00	0.00	0.15
25	I2_SR1	SilentIntronRegion	0	11.10	7.05	0.00	5.53	2.15	1.97	5.11	13.58	3.03	12.09	5.24	3.87	1.92	0.00	2.32	0.27	1.97	0.00	0.00	0.00	3.14	0.00	0.20	0.95	0.00	0.00	0.00	0.00	0.15
26	E3_Aa	NovelBoundary	0	14.27	7.47	0.00	0.00	0.00	11.36	12.87	0.00	4.08	7.15	8.76	7.92	5.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	ER3a	ExonRegion	0	13.92	16.03	0.00	1.97	13.40	9.43	9.07	4.38	6.39	12.25	6.69	3.74	4.53	0.19	0.63	0.00	1.23	0.79	2.63	0.00	11.93	1.48	0.00	0.31	0.00	0.01	0.00	0.00	0.18
28	E3_Da	NovelBoundary	0	4.84	32.96	0.00	0.00	14.74	6.06	0.00	2.44	21.65	9.47	0.00	5.06	8.60	0.00	0.00	0.00	4.77	0.00	0.00	0.00	5.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
29	E3a_E4b	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.77	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	I3	Intron	0	21.72	7.72	0.00	10.05	5.29	7.08	8.35	22.18	3.44	15.44	11.27	5.34	2.99	0.28	1.14	0.43	2.09	0.06	0.05	0.00	6.55	1.01	0.14	0.58	0.18	3.03	0.03	0.10	0.52
31	I3_SR1	SilentIntronRegion	0	21.73	7.72	0.00	10.05	5.29	7.08	8.35	22.18	3.44	15.44	11.27	5.35	2.99	0.28	1.14	0.43	2.09	0.06	0.05	0.00	6.55	1.01	0.14	0.58	0.18	3.03	0.03	0.10	0.52
32	E4_Aa	NovelBoundary	0	469.58	212.61	0.00	160.69	83.26	241.52	380.82	742.06	71.81	379.48	332.70	283.25	526.93	5.87	19.93	5.89	21.86	14.64	16.18	0.00	97.43	81.19	4.83	12.14	3.79	145.31	0.00	2.29	34.73
33	ER4a	ExonRegion	0	243.68	90.62	0.00	76.84	32.34	62.38	175.63	325.70	20.21	161.01	228.84	145.05	207.41	2.27	20.54	2.25	6.23	1.56	12.21	0.00	22.46	50.28	4.02	7.99	0.88	33.73	0.00	0.00	14.04
34	E4_Ab	KnownBoundary	0	460.20	78.14	0.00	137.40	87.98	110.73	188.24	480.24	46.01	214.95	344.72	266.53	365.83	2.88	41.86	0.00	16.39	0.00	8.09	0.00	20.82	115.27	6.35	16.09	4.74	60.98	0.00	0.00	21.26
35	ER4b	ExonRegion	0	728.85	348.00	0.67	660.51	308.65	284.86	651.71	1046.32	82.42	548.57	700.27	438.43	691.36	16.38	50.94	10.67	34.14	11.38	10.24	0.00	114.05	133.24	12.99	14.78	4.81	107.08	0.52	5.06	39.89
36	E4_Da	NovelBoundary	0	48.60	18.03	0.00	87.14	7.37	10.67	19.28	65.09	12.39	28.72	42.36	11.87	5.22	0.00	0.00	0.00	6.60	0.00	0.00	0.00	29.40	4.76	0.00	8.19	0.00	0.00	0.00	0.00	0.00
37	E4a_E5a	KnownJunction	0	521.14	253.43	0.00	621.84	386.85	181.13	455.43	575.14	41.63	376.93	467.21	351.77	408.63	15.71	9.97	2.83	33.38	10.02	16.18	0.00	74.24	79.00	11.08	19.86	2.99	46.56	1.99	0.00	12.12
38	E5_Aa	NovelBoundary	0	942.17	180.81	7.30	323.75	20.63	327.31	402.62	1388.27	91.94	434.61	292.97	113.16	73.21	2.26	132.95	111.31	126.93	117.90	48.55	0.00	77.49	35.15	61.86	6.10	9.09	69.35	2.53	31.50	1.55
39	ER5a	ExonRegion	0	239.41	105.40	0.87	315.62	105.90	87.74	213.27	320.33	24.65	174.84	167.31	161.74	220.29	8.62	5.74	0.19	14.78	3.10	1.96	0.00	27.08	44.11	5.16	3.37	0.42	16.53	0.20	0.89	8.53
40	E5_Da	KnownBoundary	0	1877.15	400.89	4.26	585.82	75.16	563.35	890.09	2717.27	133.63	1143.88	872.77	227.07	383.57	17.22	226.23	140.91	136.23	145.64	64.29	0.00	195.54	92.42	114.90	5.74	33.45	225.64	16.25	85.06	6.93
41	ER5b	ExonRegion	0	190.81	80.20	0.00	169.68	59.29	50.07	153.80	203.06	14.82	140.01	143.70	78.28	150.34	5.22	12.39	0.00	7.24	3.45	5.77	0.00	31.63	26.75	3.98	0.97	0.00	23.30	0.00	0.84	4.16