Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CSRP1	Gene	0	351.33	196.98	484.49	589.94	123.38	168.49	212.79	303.35	221.67	276.03	192.12	122.47	287.14	196.10	206.56	174.52	162.85	238.69	107.80	126.73	233.71	310.37	417.29	928.36	300.24	299.21	272.15	123.27	220.66
2	367306	Transcript	0	4.07	5.65	8.82	22.45	2.65	0.81	1.81	1.59	1.31	4.28	3.65	1.89	5.26	3.76	8.11	5.06	3.44	7.34	4.96	4.14	1.80	1.65	9.17	19.22	4.17	7.56	5.27	6.58	6.38
3	458271	Transcript	0	17.06	6.27	6.59	7.81	0.83	5.08	4.73	3.25	4.36	5.58	2.50	3.02	1.13	6.49	11.08	10.84	9.50	8.65	4.68	3.04	6.19	2.55	1.77	19.35	3.89	4.78	2.34	1.93	1.80
4	340006	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	481851	Transcript	0	9.75	3.05	2.47	0.00	0.42	2.13	0.35	1.11	0.63	2.33	2.25	0.21	0.00	1.76	0.12	3.33	0.79	4.20	0.82	0.00	3.68	0.37	0.16	2.38	0.61	1.40	0.16	0.70	0.34
6	471596	Transcript	0	7.11	1.63	5.89	2.48	1.35	4.95	0.51	0.64	1.44	4.91	3.06	0.86	0.45	5.72	3.23	6.18	4.03	8.84	2.37	2.23	3.33	0.83	0.83	4.80	2.31	2.54	0.00	3.02	0.00
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER2a	ExonRegion	0	2.02	0.53	5.97	36.28	0.49	1.05	4.42	0.63	1.42	1.30	0.54	3.51	5.39	0.62	1.93	3.78	5.32	1.56	0.18	4.00	0.75	0.00	4.91	1.72	0.00	2.23	0.25	0.17	5.39
9	E2_Ab	KnownBoundary	0	14.86	4.85	97.49	253.01	12.97	13.04	52.98	4.93	18.55	11.66	4.62	24.10	45.38	5.87	36.28	40.01	33.11	4.62	0.00	26.88	5.74	0.00	26.55	2.99	0.00	7.98	2.53	3.95	45.99
10	ER2b	ExonRegion	0	19.51	10.43	36.93	135.83	23.94	12.56	16.63	11.51	7.56	20.42	13.85	13.54	33.25	13.39	12.72	25.99	13.60	35.00	7.36	12.13	14.08	23.73	37.80	47.71	15.54	38.86	17.85	14.99	34.50
11	E2_Ac	KnownBoundary	0	2.71	4.17	19.33	48.75	19.16	7.14	7.72	17.87	14.65	8.95	5.69	10.09	29.77	5.27	9.97	3.67	5.90	0.00	0.00	0.00	5.25	20.47	8.57	5.26	1.59	25.75	16.25	3.73	18.09
12	E2_Ad	KnownBoundary	1	168.23	64.57	276.88	981.40	202.93	79.42	60.02	63.85	37.09	201.33	147.45	81.72	194.09	124.83	58.40	179.70	73.63	53.30	0.00	55.66	129.04	209.49	389.76	647.14	192.57	301.00	198.94	145.89	271.24
13	ER2c	ExonRegion	1	250.79	111.69	469.03	1287.03	298.89	130.59	131.02	108.62	68.53	280.09	173.76	132.35	293.58	173.25	117.61	288.50	139.24	365.71	67.89	95.56	195.41	301.06	482.81	714.18	231.55	487.21	269.24	218.43	375.81
14	ER2d	ExonRegion	0	417.00	136.67	725.40	1952.92	488.95	190.75	238.22	229.52	108.64	420.44	239.28	229.12	446.47	251.69	192.29	474.32	223.32	452.96	74.47	154.42	283.85	395.84	668.62	827.47	338.71	699.18	416.04	298.20	584.13
15	E2_Da	NovelBoundary	0	0.00	0.00	0.00	8.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	1.06	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E2a_E3a	KnownJunction	0	539.07	121.48	1119.23	2343.71	686.16	243.14	372.41	335.47	167.00	493.69	213.25	318.28	539.48	296.65	263.10	574.58	336.94	254.68	24.05	184.01	368.01	454.47	704.96	577.22	331.95	782.07	470.78	336.31	708.44
17	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	2.54	0.00	1.56	3.23	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	2.02	0.00	0.00	0.00
18	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
19	ER3a	ExonRegion	0	273.64	119.33	625.28	777.92	207.02	129.88	175.17	302.30	126.39	247.91	157.17	192.47	290.12	225.31	129.90	154.49	252.66	175.29	67.89	104.79	171.22	256.79	280.04	564.08	208.56	423.95	313.71	195.94	401.01
20	E3_Da	KnownBoundary	0	7.96	0.00	2.82	0.00	0.00	0.00	0.00	0.00	0.00	3.99	0.00	0.00	0.00	2.35	8.37	3.82	0.95	0.00	0.00	0.00	0.00	2.43	0.00	2.33	0.00	2.02	0.00	0.00	0.00
21	E3a_E4a	KnownJunction	0	520.78	163.94	136.14	240.07	19.16	169.51	119.01	374.39	125.43	241.79	148.05	91.47	219.98	307.25	99.06	116.28	103.72	284.73	72.83	183.67	185.43	510.09	213.74	1436.11	279.90	233.41	50.94	86.90	200.56
22	E3a_E5a	NovelJunction	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER3b	ExonRegion	0	9.75	3.05	2.47	0.00	0.42	2.13	0.35	1.11	0.63	2.33	2.25	0.21	0.00	1.76	0.12	3.33	0.79	4.20	0.82	0.00	3.68	0.37	0.16	2.38	0.61	1.40	0.16	0.70	0.34
24	E3_Db	NovelBoundary	0	8.08	12.80	1.89	0.00	5.89	0.00	0.00	0.00	1.89	2.04	0.00	0.00	0.00	5.49	8.37	0.00	4.05	14.64	0.00	0.00	5.17	3.79	0.00	2.57	0.00	3.52	0.00	4.58	0.00
25	I3	Intron	0	6.62	2.68	2.91	1.45	0.72	2.04	0.54	0.97	0.36	3.41	1.76	0.54	0.24	2.96	0.84	3.68	2.96	5.03	2.71	0.85	3.62	0.32	0.51	1.80	0.67	2.10	1.09	1.03	0.39
26	I3_SR1	SilentIntronRegion	0	6.66	2.20	2.47	1.24	0.45	1.38	0.19	0.85	0.19	2.08	0.88	0.40	0.24	2.10	0.14	3.18	1.91	4.47	2.05	0.78	2.27	0.44	0.33	1.72	0.58	2.31	0.37	1.03	0.20
27	I3_SR2	SilentIntronRegion	0	11.84	2.77	5.41	1.06	0.00	0.78	0.00	0.00	0.00	1.64	0.95	0.59	0.00	3.88	0.00	3.57	3.03	6.49	0.25	0.09	0.32	0.00	1.57	1.22	0.48	1.78	2.32	1.29	0.00
28	I3_AR1	ActiveIntronRegion	0	4.85	0.57	3.10	0.92	0.00	1.51	0.23	0.71	0.07	4.08	0.97	0.13	0.00	2.58	0.25	1.79	2.02	4.07	2.68	1.07	2.89	0.23	0.05	0.55	0.37	1.94	2.73	1.16	0.00
29	I3_SR3	SilentIntronRegion	0	7.17	4.79	2.76	0.00	0.00	0.95	0.25	0.00	0.01	10.37	1.62	1.21	0.00	5.61	0.48	3.19	6.69	7.01	3.74	0.00	2.41	0.00	0.00	2.07	0.00	1.20	0.00	0.00	0.00
30	I3_AR2	ActiveIntronRegion	0	6.72	5.71	3.63	0.00	0.00	4.26	0.30	1.36	0.83	4.87	2.62	0.91	0.39	4.39	3.00	7.59	2.96	4.05	4.26	0.82	5.21	0.27	0.80	2.38	0.42	1.55	1.09	0.24	0.60
31	I3_SR4	SilentIntronRegion	0	7.82	4.64	2.98	2.99	2.38	3.36	1.79	1.59	0.93	4.50	4.17	0.98	0.49	4.13	2.29	5.10	5.84	7.56	4.00	1.04	7.36	0.25	1.13	3.13	1.47	2.23	1.02	1.47	1.25
32	I3_AR3	ActiveIntronRegion	0	5.24	0.00	3.91	4.94	3.37	1.82	1.69	0.82	0.00	3.16	3.75	1.32	0.00	4.08	0.00	3.76	3.91	3.91	0.00	0.00	2.83	0.00	1.25	1.57	0.21	1.72	0.00	0.09	0.00
33	E4_Aa	NovelBoundary	0	13.63	4.56	2.69	0.00	0.00	1.96	0.00	0.00	0.00	2.04	1.33	0.00	1.53	5.58	0.00	7.42	5.54	0.00	0.00	0.00	6.14	0.00	0.00	3.05	0.00	0.00	2.14	2.11	0.00
34	ER4a	ExonRegion	0	547.18	222.89	390.06	456.93	83.86	295.50	344.08	481.52	184.16	471.92	333.45	270.50	444.79	386.83	236.15	338.52	308.15	448.20	144.34	233.07	396.55	463.59	607.77	1148.66	415.72	577.11	330.95	237.73	488.92
35	E4_Da	KnownBoundary	0	16.40	4.85	4.73	0.00	7.37	3.91	5.84	0.00	0.00	11.66	10.47	0.00	0.00	5.58	8.97	3.14	10.31	9.25	8.09	0.00	1.76	0.00	0.00	7.72	0.00	0.00	0.00	4.00	0.00
36	E4a_E5a	KnownJunction	0	593.75	148.24	1118.73	1015.69	241.10	424.92	449.71	584.45	204.15	548.41	347.98	278.10	427.00	442.62	295.59	260.71	415.25	519.50	129.48	255.87	531.14	541.11	645.56	1223.53	427.91	631.01	642.09	343.10	489.33
37	ER4b	ExonRegion	0	7.11	1.63	5.89	2.48	1.35	4.95	0.51	0.64	1.44	4.91	3.06	0.86	0.45	5.72	3.23	6.18	4.03	8.84	2.37	2.23	3.33	0.83	0.83	4.80	2.31	2.54	0.00	3.02	0.00
38	E4_Db	NovelBoundary	0	24.54	4.36	11.56	26.53	0.00	26.09	10.47	15.33	23.08	11.82	1.55	12.80	8.98	12.19	24.32	9.87	14.16	9.12	0.00	14.06	10.67	17.31	8.37	21.59	5.04	18.97	22.31	20.62	7.63
39	I4	Intron	0	10.53	4.31	3.72	2.66	0.45	3.95	0.93	3.24	2.29	4.82	1.54	2.57	0.30	4.53	3.67	5.49	4.15	8.84	1.78	1.79	3.44	0.50	0.67	3.99	1.06	3.06	0.51	0.45	0.62
40	I4_SR1	SilentIntronRegion	0	10.87	3.23	5.39	1.88	1.28	4.38	1.05	2.09	1.80	4.97	1.78	3.13	0.85	5.75	4.57	4.43	4.19	8.87	2.51	0.30	2.85	0.94	0.74	2.11	1.50	2.88	0.00	0.85	0.00
41	I4_AR2	ActiveIntronRegion	0	10.44	4.95	2.83	3.12	0.00	3.75	0.88	3.91	2.58	4.78	1.43	2.28	0.00	3.89	3.20	6.13	4.17	8.90	1.39	2.63	3.79	0.26	0.64	5.07	0.83	3.19	0.80	0.24	0.97
42	E5_Aa	NovelBoundary	0	14.33	8.53	14.13	0.00	0.00	7.48	0.00	0.00	1.55	6.03	2.63	1.30	0.00	10.66	0.00	0.00	5.69	13.87	0.00	0.00	3.93	0.00	0.00	5.68	0.00	9.27	0.00	0.00	7.23
43	ER5a	ExonRegion	0	760.39	284.32	1323.33	1485.76	323.57	400.11	481.78	527.36	204.23	593.71	399.21	261.48	424.85	439.78	330.69	347.72	317.49	535.84	201.78	273.61	559.14	542.72	803.06	1446.68	494.49	547.35	400.30	213.21	332.31
44	E5_Da	NovelBoundary	0	22.06	0.00	11.56	9.27	0.00	3.91	5.38	4.38	0.00	7.63	2.69	5.09	0.00	11.88	0.00	24.56	9.23	18.49	24.28	0.00	9.59	4.81	0.00	11.96	1.82	2.15	5.07	19.32	1.55
45	E5a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	E5a_E7a	KnownJunction	0	935.69	300.55	1037.66	1750.99	319.50	446.64	534.56	726.58	298.13	629.10	513.75	272.31	462.92	481.93	359.17	355.26	389.34	642.41	185.90	324.84	630.74	713.26	922.89	1404.47	559.45	609.55	464.37	265.68	360.54
47	I5	Intron	0	24.43	10.41	9.14	15.84	2.56	10.07	6.92	4.71	4.53	9.32	3.46	3.62	0.79	9.68	10.38	16.03	12.84	17.20	5.76	5.08	12.77	1.68	2.21	20.64	5.98	3.75	5.86	3.13	2.41
48	I5_AR1	ActiveIntronRegion	0	27.40	11.72	10.49	17.99	2.77	11.41	7.67	5.30	5.17	10.36	3.56	4.13	0.83	10.92	11.74	17.35	14.71	19.00	5.90	5.80	14.22	1.94	2.43	23.26	6.53	3.48	6.70	3.45	2.78
49	I5_SR1	SilentIntronRegion	0	6.27	2.40	1.73	8.44	5.36	3.44	1.32	4.04	1.86	2.94	3.25	1.43	2.50	3.73	7.11	9.05	3.12	16.58	9.23	2.05	1.04	0.00	0.00	7.86	5.33	0.00	1.76	4.70	0.00
50	I5_AR2	ActiveIntronRegion	0	6.53	2.45	0.00	0.00	0.00	1.05	3.07	0.00	0.00	3.30	3.62	0.00	0.00	1.38	0.00	9.44	0.00	3.18	4.86	0.00	5.43	0.00	1.38	3.27	2.18	9.57	0.00	0.00	0.00
51	E6_Aa	NovelBoundary	0	9.02	4.85	8.67	39.04	7.37	15.92	2.57	0.00	8.89	3.83	3.23	1.87	1.97	11.85	32.49	31.13	24.90	18.49	16.18	6.45	15.84	0.00	2.36	10.23	1.67	8.50	17.89	4.22	1.68
52	ER6a	ExonRegion	0	34.13	12.53	13.18	15.62	1.65	10.17	9.46	6.50	8.71	11.17	5.01	6.04	2.26	12.98	22.16	21.67	19.00	17.29	9.36	6.09	12.37	2.67	3.53	38.69	7.78	9.56	4.68	3.86	3.59
53	E6_Da	NovelBoundary	0	25.95	13.38	17.04	0.00	0.00	15.31	7.44	13.34	22.90	23.53	5.41	10.51	9.17	16.00	33.29	20.81	39.77	36.99	32.37	10.75	14.88	2.09	8.96	34.09	6.86	30.68	10.73	1.75	11.39
54	I6	Intron	0	21.79	12.95	12.75	15.61	0.89	8.73	6.57	9.69	9.76	9.96	2.16	6.38	2.11	11.99	26.35	15.38	22.49	12.24	10.44	3.00	10.61	3.60	3.28	35.53	8.30	9.13	1.33	4.14	2.43
55	I6_AR1	ActiveIntronRegion	0	21.95	13.05	12.84	15.67	0.89	8.79	6.61	9.76	9.83	10.03	2.18	6.43	2.13	12.07	26.54	15.48	22.65	12.33	10.51	3.02	10.69	3.62	3.31	35.78	8.36	9.19	1.34	4.17	2.44
56	E7_Aa	NovelBoundary	0	16.69	35.58	24.74	0.00	13.56	10.17	12.76	13.79	25.98	11.22	4.84	7.50	1.18	15.95	45.05	7.11	39.46	4.62	0.00	4.13	21.18	4.57	0.00	54.01	9.09	12.10	0.00	6.60	6.27
57	ER7a	ExonRegion	0	1022.62	373.78	1111.84	1741.73	259.68	536.75	595.63	759.99	351.41	813.98	579.47	316.70	585.33	580.13	464.49	430.22	420.51	669.95	202.60	317.70	723.51	845.04	1132.09	1978.76	757.68	804.12	700.78	308.58	442.97
58	E7_Da	NovelBoundary	0	5.54	0.00	3.54	0.00	12.67	0.00	0.00	0.00	4.20	3.75	3.13	1.54	0.00	0.00	0.00	3.21	1.19	0.00	0.00	0.00	0.00	1.99	2.36	2.99	0.00	1.59	0.00	4.58	0.00
59	E7a_E8a	KnownJunction	0	1011.36	439.96	1338.45	1345.49	244.93	446.10	460.01	715.38	385.13	823.32	561.07	342.55	670.42	568.89	544.54	420.97	367.53	747.08	282.79	358.00	667.96	798.69	1223.26	2309.89	849.95	964.92	791.43	310.48	598.44
60	I7	Intron	0	3.54	1.31	1.25	0.00	0.73	1.44	1.21	0.00	2.60	1.30	1.25	0.92	0.29	1.16	4.81	0.37	1.34	1.49	3.35	0.00	2.14	0.54	0.27	7.74	1.29	3.06	0.55	2.20	0.00
61	I7_AR1	ActiveIntronRegion	0	3.56	1.32	1.26	0.00	0.74	1.45	1.22	0.00	2.62	1.31	1.26	0.93	0.29	1.16	4.84	0.37	1.35	1.50	3.37	0.00	2.15	0.54	0.27	7.79	1.29	3.08	0.55	2.21	0.00
62	E8_Aa	NovelBoundary	0	20.00	0.00	4.63	0.00	0.00	0.00	0.00	0.00	3.11	3.79	1.55	0.00	1.53	6.65	0.00	3.82	1.40	18.49	0.00	0.00	0.00	0.00	2.07	8.55	0.00	3.78	0.00	0.00	1.55
63	ER8a	ExonRegion	0	953.57	590.40	1373.11	1616.96	342.79	453.04	590.08	873.30	700.24	756.72	532.20	321.28	840.71	519.37	599.03	457.11	427.14	637.14	312.22	349.85	634.91	895.60	1200.08	2766.03	877.82	808.83	794.63	333.51	600.36
64	ER8b	ExonRegion	1	10.18	16.42	20.48	31.08	7.47	1.37	1.01	4.14	2.53	11.55	10.41	2.16	10.39	10.66	22.40	11.39	5.01	20.47	14.71	8.43	4.64	4.96	22.60	55.93	12.51	20.43	15.57	19.56	13.76
65	IG40_SR1	SilentIntergenicRegion	0	0.00	0.00	1.95	0.00	0.00	0.18	0.00	0.00	0.00	1.44	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.57	1.83	0.00	0.00
66	IG40_AR1	ActiveIntergenicRegion	0	0.00	0.00	2.50	4.63	0.00	0.42	0.00	0.59	0.00	0.55	0.38	0.40	0.00	0.29	0.00	3.20	0.48	7.39	0.00	0.64	0.46	1.16	1.17	0.00	1.38	3.13	1.23	0.00	2.59