Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RP5-1116C7.1	Gene	0	10.39	7.90	0.75	3.86	6.58	11.60	9.77	1.32	3.22	8.69	1.71	2.49	0.64	7.80	16.01	17.48	5.90	9.60	20.94	15.38	13.32	1.78	2.60	62.97	11.68	6.63	6.41	0.29	13.56
2	417354	Transcript	0	8.07	4.96	0.76	6.13	4.61	13.71	8.89	1.19	4.93	7.08	2.69	2.45	0.22	7.60	12.15	15.73	5.98	6.25	16.28	11.50	12.66	2.59	4.02	63.74	13.23	7.27	8.03	0.30	15.32
3	ER1a	ExonRegion	0	5.40	0.00	0.00	2.59	1.77	2.00	1.46	1.33	0.00	1.57	0.00	1.33	0.47	1.33	0.00	2.69	0.54	4.41	1.16	1.02	3.58	0.00	1.31	6.38	2.09	3.41	0.66	0.00	4.85
4	E1_Da	NovelBoundary	0	2.18	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.40	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	3.37	0.00	0.00	0.00	1.74	0.00	0.00	0.00	3.10
5	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	Ix	Intron	0	1.13	1.22	0.00	0.00	0.00	3.60	2.12	0.00	4.71	3.04	0.00	0.00	0.00	4.51	5.77	2.61	0.78	3.04	1.68	1.45	0.75	0.95	0.95	11.29	3.76	6.61	0.00	0.86	0.71
7	Ix_SR1	SilentIntronRegion	0	1.15	1.24	0.00	0.00	0.00	3.68	2.16	0.00	4.81	3.10	0.00	0.00	0.00	4.60	5.90	2.66	0.80	3.10	1.72	1.48	0.77	0.97	0.97	11.53	3.84	6.75	0.00	0.88	0.72
8	E2_Aa	NovelBoundary	0	7.79	0.00	0.97	0.00	7.37	3.64	0.00	0.00	4.17	0.00	0.00	0.00	0.00	5.78	8.37	0.00	0.00	5.39	16.18	4.13	5.70	0.00	4.38	64.54	7.88	0.00	2.14	0.00	0.00
9	ER2a	ExonRegion	0	12.01	2.61	0.22	0.00	10.78	10.06	6.54	1.66	4.02	5.12	1.19	1.20	0.00	8.45	1.92	10.99	2.77	4.82	15.38	18.64	11.74	2.94	3.57	73.49	14.21	1.96	4.99	0.00	8.92
10	E2_Da	NovelBoundary	0	0.00	4.36	1.22	0.00	0.00	10.44	0.00	0.00	2.62	0.00	0.00	1.14	0.00	2.26	0.00	6.43	1.40	0.00	0.00	0.00	0.00	2.19	0.00	7.18	1.63	0.00	0.00	0.00	5.88
11	E2a_E3a	KnownJunction	0	8.08	3.78	1.12	0.00	5.75	45.77	15.62	2.29	12.36	7.15	1.61	5.30	0.00	14.09	8.37	23.56	6.80	0.00	24.28	7.36	23.79	4.76	8.37	110.54	25.35	8.02	8.75	0.00	37.47
12	Ix	Intron	0	1.00	1.70	0.45	0.71	0.24	2.91	0.99	0.09	0.84	2.09	0.12	0.27	0.37	2.06	3.50	3.67	1.98	2.38	2.83	3.22	0.74	0.27	0.09	5.77	2.35	0.23	0.23	0.08	2.13
13	Ix_SR2	SilentIntronRegion	0	0.65	1.94	0.00	0.00	0.00	1.24	2.43	0.56	0.00	0.87	0.00	0.00	1.17	2.26	1.66	4.49	1.80	2.42	0.99	3.09	0.00	0.00	0.00	2.60	1.29	1.42	1.09	0.98	0.60
14	Ix_AR1	ActiveIntronRegion	0	1.20	2.11	0.98	0.94	0.00	3.69	0.66	0.12	0.99	1.69	0.00	0.08	0.38	2.04	2.18	2.27	2.05	3.23	2.08	3.35	0.33	0.47	0.24	4.93	3.27	0.31	0.36	0.00	1.65
15	Ix_SR1	SilentIntronRegion	0	0.92	1.38	0.15	0.65	0.44	2.62	1.01	0.00	0.87	2.56	0.22	0.45	0.24	2.04	4.70	4.53	1.97	1.79	3.63	3.15	1.13	0.16	0.00	6.84	1.88	0.00	0.00	0.00	2.70
16	E3_Aa	NovelBoundary	0	5.01	0.00	0.00	0.00	0.00	8.71	5.21	0.00	1.43	7.35	0.00	0.00	0.00	4.30	9.37	10.25	8.80	4.62	8.09	0.00	6.54	0.00	0.00	28.17	5.38	0.00	0.00	0.00	15.19
17	ER3a	ExonRegion	0	9.26	11.67	1.32	11.81	5.88	19.90	17.11	2.05	9.23	19.32	5.36	5.45	0.00	13.22	33.39	26.31	12.98	19.00	25.82	16.47	13.72	5.02	6.26	87.67	25.12	30.30	17.42	2.13	32.32
18	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	7.37	1.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.22	0.00	0.00	5.58	0.00	0.00	3.39	0.00	0.00	2.12	5.98	1.55	0.00	0.00	0.00	0.00
19	E3a_E4a	KnownJunction	0	8.91	4.36	1.52	25.24	0.00	3.64	8.70	0.00	5.97	6.11	8.95	1.30	0.00	6.71	18.34	22.26	11.30	4.62	16.18	15.46	17.21	3.94	6.65	86.01	13.75	4.38	17.79	0.00	9.74
20	Ix	Intron	0	1.64	4.01	0.45	0.24	0.33	2.80	1.88	0.12	2.54	2.74	0.00	0.41	0.50	3.06	2.21	4.01	2.44	2.27	1.28	2.10	1.66	0.18	0.48	9.69	4.34	0.10	1.16	0.11	3.90
21	Ix_SR3	SilentIntronRegion	0	3.28	4.21	0.00	0.00	1.89	2.75	2.34	0.00	3.19	2.76	0.00	0.00	0.00	1.89	0.00	2.78	2.81	1.94	1.23	1.06	6.22	0.30	0.00	5.21	6.56	0.00	0.00	0.00	1.29
22	Ix_AR2	ActiveIntronRegion	0	1.60	4.20	0.85	0.83	0.57	3.77	1.17	0.43	3.49	6.23	0.00	0.86	0.73	4.59	5.77	4.68	3.61	2.38	0.00	2.54	2.48	0.12	0.42	11.45	8.71	0.37	2.55	0.38	6.06
23	Ix_SR2	SilentIntronRegion	0	3.18	1.97	1.84	0.00	0.00	2.00	0.00	0.00	2.66	4.15	0.00	0.00	1.06	0.70	0.00	3.25	1.45	1.52	0.00	3.01	0.77	0.08	0.00	15.58	5.92	0.00	2.83	0.00	6.17
24	Ix_AR1	ActiveIntronRegion	0	1.83	3.24	0.40	0.00	0.00	1.04	2.02	0.00	1.28	1.11	0.00	0.36	0.69	3.13	1.85	6.02	2.05	1.92	2.44	2.22	0.56	0.39	1.02	8.41	2.41	0.00	0.34	0.00	3.92
25	Ix_SR1	SilentIntronRegion	0	0.76	4.91	0.00	0.00	0.00	3.81	2.63	0.00	2.69	0.71	0.00	0.20	0.11	2.18	0.00	1.75	1.73	2.76	1.59	1.72	0.75	0.00	0.21	9.70	1.01	0.00	0.70	0.00	2.12
26	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.42	2.57	0.00	4.20	3.83	0.00	0.00	1.50	2.04	0.00	6.88	2.30	0.00	0.00	0.00	0.00	0.00	0.00	2.87	1.78	0.00	0.00	0.00	2.05
27	ER4a	ExonRegion	0	12.84	12.27	1.11	3.29	8.12	14.58	12.80	1.02	2.96	10.26	1.69	2.59	1.08	9.40	23.01	24.26	7.45	10.86	31.14	21.55	18.60	1.47	1.97	82.11	12.11	2.82	6.62	0.00	13.94