Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	DMWD	Gene	0	56.41	27.77	67.28	26.97	50.15	53.00	18.02	20.38	31.70	62.15	19.82	70.07	29.39	82.45	46.21	100.35	133.78	122.79	67.97	54.53	73.80	56.23	104.21	105.03	55.93	81.58	32.98	78.94	70.40
2	270223	Transcript	0	38.43	20.18	61.53	24.65	19.68	22.11	4.67	10.52	17.42	36.30	12.89	54.93	20.33	39.09	36.71	84.31	69.95	82.45	40.81	39.59	58.47	64.14	51.33	76.47	38.73	40.95	15.49	52.08	89.76
3	377735	Transcript	0	17.05	8.82	78.96	21.35	39.20	31.12	9.90	6.07	20.04	30.76	6.07	55.57	16.50	70.26	7.97	65.79	131.32	83.99	56.42	33.49	42.96	27.32	66.54	77.88	42.05	57.20	17.79	37.65	35.92
4	ER1a	ExonRegion	0	25.11	13.03	17.96	10.15	26.98	24.32	14.86	9.99	8.07	21.09	9.72	25.81	10.68	31.20	7.92	41.28	32.05	59.62	32.09	20.35	28.29	20.73	36.59	22.10	15.51	40.25	7.34	31.00	20.34
5	E1_Da	NovelBoundary	0	4.95	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.53	4.62	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	1	86.24	73.88	90.37	102.02	167.86	112.26	80.84	33.84	52.71	105.26	49.73	148.10	62.80	129.28	23.92	126.76	158.94	192.39	121.39	98.99	144.72	87.12	145.58	128.30	69.22	136.47	49.35	121.72	93.30
7	I1	Intron	0	7.90	2.02	1.45	0.62	1.48	3.46	2.10	0.96	2.67	3.63	1.34	2.43	0.62	1.61	1.84	2.03	13.21	4.55	3.46	1.28	1.79	0.23	0.47	2.99	1.12	2.25	0.64	2.47	0.75
8	I1_SR1	SilentIntronRegion	0	7.91	2.02	1.45	0.62	1.49	3.46	2.10	0.96	2.68	3.64	1.34	2.44	0.62	1.61	1.84	2.03	13.23	4.56	3.47	1.28	1.80	0.23	0.47	2.99	1.12	2.25	0.64	2.48	0.76
9	E2_Aa	NovelBoundary	0	18.29	0.00	0.00	0.00	6.48	12.47	2.92	0.00	2.50	6.11	1.52	0.00	1.91	2.33	0.00	10.48	25.05	0.00	0.00	6.62	1.68	2.09	2.51	8.85	0.00	0.00	0.00	0.00	3.20
10	ER2a	ExonRegion	0	135.32	55.43	91.71	64.02	107.25	112.03	57.05	57.47	44.04	135.67	62.45	171.73	64.88	193.16	47.93	169.10	227.03	214.96	110.70	129.77	157.03	114.89	196.14	191.04	114.89	159.39	62.94	156.95	101.87
11	E2_Da	NovelBoundary	0	52.03	9.21	31.32	21.14	76.04	68.33	73.52	25.03	30.82	77.21	86.08	79.28	44.58	40.04	35.08	13.00	60.69	55.87	24.28	28.86	19.61	20.13	85.79	25.72	12.09	42.10	10.09	104.15	20.27
12	E2a_E3a	KnownJunction	0	108.59	56.72	82.52	39.04	56.00	101.98	35.02	28.62	34.56	129.62	51.60	143.52	39.01	165.84	24.32	205.78	249.79	265.21	169.27	119.17	162.37	101.32	174.29	222.75	105.32	178.09	44.53	175.68	150.71
13	I2	Intron	0	8.40	6.13	6.78	8.72	14.85	9.01	3.27	3.11	4.70	9.56	9.65	11.67	6.43	10.18	5.34	2.51	10.89	14.27	8.20	5.99	3.28	2.68	16.86	9.59	3.38	6.79	2.47	11.13	2.35
14	I2_AR1	ActiveIntronRegion	0	17.53	10.97	14.48	17.25	32.90	18.19	8.73	9.74	10.26	20.83	26.05	24.92	13.40	20.15	13.26	3.58	18.31	26.93	19.21	14.21	5.49	7.81	40.02	18.63	7.21	12.10	5.73	25.88	3.86
15	I2_SR1	SilentIntronRegion	0	4.85	4.25	3.78	5.41	7.83	5.44	1.14	0.52	2.54	5.17	3.25	6.51	3.73	6.31	2.26	2.11	8.02	9.35	3.92	2.78	2.42	0.68	7.84	6.08	1.89	4.74	1.21	5.38	1.77
16	E3_Aa	NovelBoundary	0	2.65	7.76	1.00	0.00	0.00	1.96	0.00	0.00	0.00	1.68	0.00	1.23	2.96	4.17	0.00	0.00	8.13	4.62	0.00	0.00	4.09	0.00	2.12	2.27	1.93	6.52	0.00	2.25	0.00
17	ER3a	ExonRegion	0	65.52	22.92	90.19	34.27	52.61	55.97	20.97	24.26	28.24	65.87	18.12	81.06	33.72	92.57	46.27	107.88	152.05	149.42	65.04	69.33	76.26	76.89	140.81	111.71	55.18	99.04	28.75	97.43	75.91
18	E3_Da	NovelBoundary	0	2.65	0.00	2.64	0.00	0.00	1.61	0.00	0.00	1.55	1.64	0.00	2.77	1.27	4.21	0.00	6.66	5.94	9.25	0.00	3.14	2.01	0.00	2.51	8.85	0.00	6.31	0.00	0.00	0.00
19	E3a_E4a	KnownJunction	0	37.87	18.03	55.83	28.69	12.97	23.06	4.69	8.56	11.21	37.59	7.21	35.18	14.58	37.11	34.08	75.27	47.70	83.99	24.28	32.17	50.26	67.82	43.88	93.67	41.90	41.20	6.76	48.21	57.41
20	E3a_E5a	KnownJunction	0	17.05	8.82	78.96	21.35	39.20	31.12	9.90	6.07	20.04	30.76	6.07	55.57	16.50	70.26	7.97	65.79	131.32	83.99	56.42	33.49	42.96	27.32	66.54	77.88	42.05	57.20	17.79	37.65	35.92
21	I3	Intron	0	7.49	1.02	3.03	3.85	5.25	4.71	0.95	2.47	2.03	7.08	1.68	6.75	1.96	4.92	4.01	5.39	12.34	7.75	4.08	5.82	4.12	2.91	4.25	8.38	2.79	4.65	1.48	2.41	1.17
22	I3_AR1	ActiveIntronRegion	0	4.42	0.74	2.61	0.00	2.69	6.58	0.00	0.85	0.00	3.28	1.33	4.69	2.14	2.23	0.86	4.29	6.77	6.66	0.00	5.14	4.00	1.66	2.35	2.81	1.57	4.08	3.37	3.91	0.00
23	I3_SR1	SilentIntronRegion	0	8.03	1.07	3.11	4.52	5.70	4.40	1.11	2.76	2.39	7.75	1.74	7.12	1.93	5.39	4.56	5.59	13.31	7.94	4.78	5.95	4.15	3.13	4.59	9.35	3.00	4.75	1.15	2.16	1.38
24	E4_Aa	NovelBoundary	0	10.85	4.85	1.45	0.00	0.00	1.46	0.00	0.00	0.00	2.04	3.23	15.69	3.18	8.35	0.00	0.00	10.47	14.26	0.00	0.00	4.09	0.00	7.19	13.64	1.93	8.45	0.00	0.00	6.17
25	ER4a	ExonRegion	0	37.67	21.29	57.14	16.58	22.65	21.65	6.50	9.11	14.29	32.48	11.69	55.12	18.10	41.25	33.01	77.20	73.54	88.75	41.52	38.56	56.45	57.45	52.87	73.28	39.37	34.20	17.61	51.29	90.28
26	E4_Da	NovelBoundary	0	9.02	0.00	0.00	0.00	26.08	0.00	0.00	0.00	2.53	4.07	6.07	5.60	1.50	3.97	0.00	6.66	16.59	28.51	0.00	11.66	4.05	4.47	7.19	8.73	5.46	0.00	2.04	0.00	3.27
27	E4a_E5a	KnownJunction	1	39.76	21.23	71.61	28.69	23.43	21.64	2.80	13.88	26.77	38.83	19.77	74.49	28.31	38.91	43.05	100.44	88.62	74.62	56.65	48.05	68.71	67.14	57.23	62.45	34.93	47.46	22.12	56.75	121.59
28	I4	Intron	0	5.42	2.39	1.49	0.00	3.63	4.50	0.90	0.00	2.34	5.58	3.54	6.23	1.92	4.10	4.11	6.17	11.09	6.87	2.38	3.28	4.45	0.54	1.61	10.24	3.40	2.80	2.45	2.91	3.09
29	I4_AR1	ActiveIntronRegion	0	5.43	2.40	1.50	0.00	3.64	4.51	0.90	0.00	2.34	5.60	3.55	6.25	1.93	4.11	4.13	6.19	11.13	6.89	2.38	3.29	4.47	0.54	1.62	10.27	3.41	2.81	2.46	2.92	3.10
30	E5_Aa	NovelBoundary	0	2.95	0.00	6.33	0.00	5.60	7.25	2.63	2.34	1.89	3.40	8.07	4.88	0.00	5.14	18.34	13.77	7.97	13.87	0.00	0.00	2.05	0.00	2.51	8.08	1.86	0.00	17.29	6.74	0.00
31	ER5a	ExonRegion	0	49.07	34.62	60.31	21.41	49.95	54.35	11.41	15.84	43.35	65.28	19.73	62.32	27.77	78.44	61.20	106.81	144.40	109.12	79.94	42.98	77.76	40.70	83.33	119.43	64.56	71.57	43.55	69.22	78.24
32	IG31	Intergenic	0	8.39	12.28	5.81	0.00	4.25	9.18	0.88	1.87	6.09	5.44	1.72	10.89	1.31	13.83	21.34	17.64	20.11	23.77	19.90	8.45	13.43	3.92	7.61	31.79	13.48	5.92	10.08	10.16	5.81
33	IG31_AR1	ActiveIntergenicRegion	0	8.39	12.28	5.81	0.00	4.25	9.18	0.88	1.87	6.09	5.44	1.72	10.89	1.31	13.83	21.34	17.64	20.11	23.77	19.90	8.45	13.43	3.92	7.61	31.79	13.48	5.92	10.08	10.16	5.81