Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NR2C2AP	Gene	0	143.98	75.07	127.78	179.90	269.45	65.27	136.12	153.21	126.59	101.83	77.00	63.25	129.99	60.23	80.93	118.49	99.92	61.23	119.34	234.75	86.85	126.35	80.64	85.62	84.65	108.54	46.32	127.39	112.69
2	331552	Transcript	0	114.92	61.13	106.93	324.49	451.40	62.82	107.82	97.72	95.15	82.69	61.72	49.78	105.29	43.05	70.66	115.39	74.99	58.55	115.90	193.12	73.06	97.51	75.75	58.39	77.58	93.55	39.25	102.71	95.92
3	420605	Transcript	0	9.02	0.00	13.13	10.35	13.26	9.71	15.68	12.49	7.16	0.00	3.07	2.98	2.87	2.17	25.31	3.14	4.01	0.00	0.00	6.70	5.37	9.14	2.27	13.10	3.03	0.00	5.07	9.93	12.25
4	ER1a	ExonRegion	0	101.01	33.88	102.35	553.86	776.17	63.33	104.93	58.23	43.32	73.41	55.67	32.04	88.83	31.46	51.10	106.64	35.42	55.29	95.79	153.70	72.34	87.20	69.31	25.19	68.78	80.76	32.87	91.35	90.90
5	E1_Ab	KnownBoundary	0	222.38	106.06	285.00	1066.60	1539.15	105.40	209.63	106.50	116.33	154.99	99.65	62.32	209.73	71.03	82.32	260.63	107.44	51.63	104.98	274.48	151.98	198.16	142.09	51.32	120.36	190.20	81.50	231.98	199.83
6	ER1b	ExonRegion	0	130.37	59.54	102.18	147.28	258.83	47.59	108.26	117.47	86.27	82.97	57.92	48.97	118.03	59.97	64.39	115.85	83.40	56.01	85.92	235.70	69.30	121.91	76.85	60.81	70.07	91.54	30.03	113.14	116.98
7	E1_Da	NovelBoundary	1	10.32	0.00	9.39	31.71	27.41	1.96	5.03	4.53	7.86	10.03	4.24	7.32	5.70	7.42	0.00	20.96	20.87	9.25	8.09	25.64	7.22	10.36	4.43	7.54	1.70	4.29	0.00	18.87	8.78
8	E1a_E2a	KnownJunction	0	168.40	71.26	359.50	422.76	577.70	55.10	137.89	176.37	123.30	99.54	94.37	69.49	144.83	66.49	169.82	80.40	126.10	74.23	72.83	288.37	76.33	161.99	64.47	108.09	97.93	72.05	42.64	113.77	85.41
9	I1	Intron	0	18.61	0.00	3.02	2.59	15.90	3.48	4.37	9.99	2.43	2.09	3.01	2.68	1.88	5.08	1.99	5.13	8.10	6.27	17.33	14.39	3.10	1.96	1.31	2.33	4.14	2.27	0.66	4.72	0.49
10	I1_AR1	ActiveIntronRegion	0	18.87	0.00	3.07	2.63	16.13	3.53	4.44	10.13	2.47	2.11	3.06	2.71	1.91	5.16	2.01	5.21	8.22	6.36	17.58	14.60	3.14	1.98	1.33	2.37	4.20	2.31	0.67	4.77	0.49
11	E2_Aa	NovelBoundary	0	18.58	0.00	5.16	9.49	44.21	3.88	5.78	4.33	6.64	15.50	7.81	10.60	4.39	10.17	15.55	7.11	29.06	4.62	32.37	9.68	1.85	12.30	7.04	5.44	8.98	0.00	7.60	10.92	8.48
12	ER2a	ExonRegion	0	271.56	114.50	264.76	575.61	921.09	117.27	264.53	290.08	163.68	178.31	152.22	92.40	232.94	101.36	122.54	171.84	154.45	68.74	184.81	387.19	152.83	208.44	123.52	134.22	132.49	188.77	70.26	233.20	195.29
13	E2_Da	NovelBoundary	0	18.64	3.78	2.74	10.14	28.88	5.18	10.81	10.00	6.24	3.04	0.00	2.83	0.00	1.82	16.94	12.70	37.28	4.62	16.18	15.13	6.98	0.00	0.00	5.74	5.72	0.00	0.00	8.67	0.00
14	E2a_E3a	KnownJunction	0	227.98	142.23	216.36	381.34	474.83	153.47	282.64	289.74	146.69	176.32	120.24	80.18	203.14	82.75	104.64	136.32	131.21	75.00	105.20	378.51	160.08	198.12	92.44	104.92	105.25	110.80	61.03	171.41	171.08
15	E2a_E4a	NovelJunction	1	35.69	8.14	9.04	10.78	106.55	5.56	15.45	4.53	24.06	3.83	17.27	3.07	11.94	12.61	15.15	13.39	18.64	4.62	40.46	22.41	26.75	27.37	1.97	5.32	5.15	11.89	6.41	49.96	6.40
16	I2	Intron	0	13.73	5.35	3.97	3.40	10.43	4.89	8.13	10.04	3.33	6.16	1.98	1.75	1.54	4.29	10.26	11.87	20.19	7.39	9.09	12.52	3.72	2.99	0.43	4.59	1.70	2.24	1.74	8.51	4.76
17	I2_AR1	ActiveIntronRegion	0	13.86	5.40	4.00	3.43	10.52	4.94	8.20	10.14	3.36	6.22	1.99	1.77	1.56	4.34	10.36	11.94	20.37	7.46	9.18	12.64	3.76	3.02	0.43	4.64	1.71	2.26	1.75	8.59	4.80
18	E3_Aa	NovelBoundary	0	7.79	0.00	8.50	0.00	12.67	3.07	2.80	8.86	1.19	3.52	0.00	0.00	0.00	4.12	6.98	14.76	25.80	9.25	8.09	4.13	12.96	6.81	0.00	3.05	0.00	0.00	0.00	8.31	4.62
19	ER3a	ExonRegion	0	170.77	72.27	171.77	204.00	251.43	86.85	204.05	233.38	119.35	129.07	95.73	84.12	139.55	75.20	90.61	116.06	124.84	79.89	102.22	305.44	114.45	152.77	91.59	106.22	93.03	114.45	42.19	129.25	119.76
20	E3_Da	NovelBoundary	0	16.22	4.85	5.06	0.00	6.48	6.87	10.07	6.97	4.66	8.63	0.00	4.37	0.00	1.93	37.07	14.23	23.25	4.62	0.00	20.18	2.05	0.00	0.00	2.27	5.30	13.78	0.00	6.60	1.45
21	E3a_E4a	KnownJunction	0	186.28	60.69	152.01	55.86	169.62	75.89	193.84	197.37	118.86	110.29	102.21	68.07	169.54	73.78	151.08	139.76	115.92	87.85	113.29	211.79	123.70	111.19	101.85	107.25	71.98	118.27	49.35	140.86	99.80
22	I3	Intron	0	3.08	0.00	0.00	0.00	10.52	3.95	2.90	2.64	0.00	0.00	0.00	0.89	0.00	0.65	3.94	3.56	0.00	1.38	4.59	5.38	3.07	1.29	0.00	4.64	0.00	0.00	0.00	1.17	0.96
23	I3_AR1	ActiveIntronRegion	0	3.17	0.00	0.00	0.00	10.76	4.06	2.98	2.67	0.00	0.00	0.00	0.91	0.00	0.67	4.06	3.67	0.00	1.42	4.72	5.54	3.16	1.33	0.00	4.77	0.00	0.00	0.00	1.20	0.97
24	E4_Aa	NovelBoundary	0	9.91	0.00	6.35	0.00	27.12	3.84	12.02	19.01	11.51	3.95	2.82	5.81	3.25	3.59	0.00	5.97	28.00	0.00	24.28	13.98	11.67	0.00	0.00	3.05	3.60	0.00	4.47	18.15	8.72
25	ER4a	ExonRegion	0	218.45	111.64	173.38	140.02	165.12	126.31	283.30	288.89	191.59	206.65	151.60	100.02	210.10	85.65	104.02	178.94	143.82	80.67	214.98	303.55	203.13	187.43	114.85	130.90	128.89	200.87	92.60	205.82	159.96
26	E4_Da	NovelBoundary	0	23.18	4.85	2.62	0.00	0.00	7.90	12.24	23.59	11.85	15.50	16.48	8.46	7.58	3.30	24.12	14.23	21.74	14.64	40.46	29.44	38.51	14.44	12.61	8.13	3.75	6.52	31.86	5.48	0.00
27	E4a_E5a	KnownJunction	0	200.61	106.55	167.38	158.32	211.77	105.78	287.73	246.34	223.55	227.65	161.81	83.22	191.58	90.53	120.79	161.95	142.21	55.35	194.22	254.38	153.58	195.59	124.11	124.83	119.64	242.51	87.72	266.40	205.81
28	I4	Intron	0	8.82	1.77	2.75	1.97	8.03	4.15	7.19	12.62	5.38	5.94	3.92	1.18	0.89	1.49	6.81	8.95	3.68	2.64	9.64	10.15	12.52	7.91	5.45	3.54	4.31	6.89	4.52	2.68	4.78
29	I4_AR1	ActiveIntronRegion	0	8.90	1.79	2.78	1.99	8.12	4.19	7.26	12.76	5.44	6.00	3.96	1.20	0.90	1.51	6.88	9.05	3.72	2.67	9.74	10.27	12.65	7.98	5.51	3.58	4.36	6.97	4.57	2.71	4.83
30	E5_Aa	NovelBoundary	0	13.68	4.75	9.67	0.00	44.06	7.83	12.99	6.82	28.78	24.01	2.78	14.28	10.89	10.90	15.75	7.57	24.67	18.49	0.00	16.37	23.79	13.90	6.70	5.56	11.14	22.96	2.53	0.00	16.54
31	ER5a	ExonRegion	0	193.96	91.15	160.39	118.65	137.78	83.83	179.35	199.47	181.94	130.12	106.72	84.74	152.31	79.47	92.49	151.91	125.30	82.56	149.11	231.67	101.23	178.24	95.12	113.39	88.84	112.07	87.88	153.65	124.27
32	E5_Da	KnownBoundary	0	168.93	97.53	176.25	202.53	207.50	77.12	152.25	183.64	111.76	105.90	86.74	70.03	134.10	60.93	126.77	177.02	119.84	103.26	129.03	222.30	104.09	121.98	83.97	84.28	70.35	88.36	55.11	131.02	126.64
33	E5a_E5b	KnownJunction	0	9.02	0.00	13.13	10.35	13.26	9.71	15.68	12.49	7.16	0.00	3.07	2.98	2.87	2.17	25.31	3.14	4.01	0.00	0.00	6.70	5.37	9.14	2.27	13.10	3.03	0.00	5.07	9.93	12.25
34	ER5b	ExonRegion	0	128.82	88.37	111.51	95.12	126.64	62.30	110.70	137.21	146.97	91.97	67.77	67.51	121.74	54.64	90.23	124.14	114.56	61.81	136.01	232.54	73.78	107.83	82.19	91.59	86.37	106.34	45.63	114.06	100.95
35	E5_Ab	KnownBoundary	0	113.90	60.40	61.84	58.45	52.17	32.31	13.22	88.88	116.36	32.52	35.34	21.63	47.83	41.79	61.39	64.49	55.17	33.13	113.29	222.05	37.54	128.25	32.95	75.67	32.62	34.59	13.82	26.24	50.08
36	ER5c	ExonRegion	1	63.19	45.88	76.72	82.24	156.00	23.52	48.74	80.91	118.90	46.22	36.75	34.01	73.36	26.36	57.73	31.18	41.27	31.20	70.00	102.67	40.96	64.53	29.42	70.07	61.94	66.92	26.96	87.80	55.99