Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF763	Gene	0	10.65	8.32	6.50	11.93	18.23	12.07	19.63	11.28	11.93	18.72	13.60	7.56	2.61	20.04	21.54	27.99	39.16	12.07	14.50	57.75	11.66	8.91	5.02	19.21	17.56	13.20	13.49	18.87	13.12
2	343949	Transcript	0	5.83	3.77	3.11	5.83	10.08	4.39	9.98	3.72	6.24	7.74	5.79	4.06	1.07	8.80	12.16	11.66	14.65	5.29	5.64	31.63	3.88	5.05	2.55	7.69	7.47	7.79	3.13	11.04	6.65
3	358987	Transcript	0	27.90	0.00	0.00	0.00	0.00	13.35	15.62	23.64	7.22	4.75	4.68	6.96	2.90	6.29	9.97	26.85	14.74	9.50	16.18	40.11	3.65	21.68	1.92	13.22	7.01	0.00	10.14	21.34	2.71
4	481745	Transcript	0	0.74	0.00	0.04	3.52	1.20	2.36	0.09	0.91	1.99	2.78	1.44	0.32	0.00	2.64	3.55	1.84	9.61	1.17	0.78	2.22	0.70	0.03	0.44	1.58	1.68	4.24	0.00	0.81	0.85
5	IG15_SR1	SilentIntergenicRegion	0	4.51	1.69	4.40	7.54	2.57	4.34	0.00	0.97	10.02	12.15	2.50	1.30	1.02	0.95	7.74	6.52	5.49	1.18	5.04	12.20	1.50	1.90	0.95	4.52	3.01	0.00	4.81	3.43	3.51
6	IG15_SR2	SilentIntergenicRegion	0	2.12	5.12	3.58	4.06	2.37	5.23	3.22	7.63	8.95	8.17	5.08	3.99	1.53	4.83	10.02	7.39	16.48	3.05	6.65	13.24	5.42	1.90	1.43	9.32	7.24	3.99	3.63	6.20	4.41
7	IG15_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	10.45	0.00	1.00	0.00	0.00	1.11	0.04	1.63	0.07	0.00	2.01	8.00	1.81	1.03	2.73	0.00	3.85	1.00	1.24	0.00	4.18	0.45	1.53	0.00	0.00	0.00
8	IG15_SR4	SilentIntergenicRegion	0	0.56	0.97	3.82	0.75	0.00	4.25	0.65	0.14	1.45	3.80	1.87	1.24	0.35	1.88	1.53	1.52	4.38	2.67	1.26	0.83	1.27	1.27	0.90	1.40	1.58	5.87	1.30	1.71	1.79
9	IG15_AR4	ActiveIntergenicRegion	0	1.52	2.65	1.09	0.00	0.00	3.11	1.15	1.30	0.84	1.82	1.69	0.21	0.27	1.10	1.71	4.78	0.28	4.85	0.00	0.00	0.00	0.15	0.00	1.70	2.88	4.23	0.00	0.00	0.47
10	ER1a	ExonRegion	0	5.17	2.49	1.12	6.30	6.87	6.07	6.46	1.65	4.53	2.44	3.12	4.14	1.75	4.03	12.75	9.77	5.32	1.32	0.00	15.51	1.43	5.41	3.43	8.83	1.68	1.73	3.73	1.80	9.44
11	ER1b	ExonRegion	0	13.84	7.64	3.06	9.92	2.32	6.80	12.00	19.41	8.48	6.93	5.77	4.48	2.06	7.40	4.17	9.69	12.64	1.63	2.25	20.52	1.71	9.64	2.20	11.14	5.54	4.58	6.99	5.88	11.85
12	E1_Da	NovelBoundary	0	2.65	0.00	2.52	0.00	0.00	5.14	0.00	1.84	0.00	0.00	2.94	0.00	1.21	4.70	0.00	6.88	3.96	4.62	0.00	4.13	0.00	0.00	0.00	2.81	5.23	1.59	0.00	0.00	5.18
13	E1a_E2b	KnownJunction	0	2.65	0.00	0.00	0.00	0.00	0.00	8.41	0.00	0.00	2.04	0.00	0.00	0.00	1.06	0.00	3.75	2.21	0.00	0.00	10.59	0.00	0.00	0.00	0.00	1.70	0.00	0.00	0.00	0.00
14	E1a_E2c	KnownJunction	0	27.90	0.00	0.00	0.00	0.00	13.35	15.62	23.64	7.22	4.75	4.68	6.96	2.90	6.29	9.97	26.85	14.74	9.50	16.18	40.11	3.65	21.68	1.92	13.22	7.01	0.00	10.14	21.34	2.71
15	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.06	0.00	0.00	0.00
16	E2_Aa	NovelBoundary	0	0.00	0.00	1.40	10.78	0.00	7.37	0.00	2.04	6.52	1.60	4.84	0.00	1.27	4.08	8.37	3.21	11.68	0.00	0.00	0.00	0.00	0.00	0.00	3.05	0.00	3.26	0.00	5.12	2.94
17	ER2a	ExonRegion	0	0.74	0.00	0.04	3.52	1.20	2.36	0.09	0.91	1.99	2.78	1.44	0.32	0.00	2.64	3.55	1.84	9.61	1.17	0.78	2.22	0.70	0.03	0.44	1.58	1.68	4.24	0.00	0.81	0.85
18	E2_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	1.61	0.00	0.00	0.84	0.00	0.00	3.20	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.55	0.00	0.00	2.11	0.00
19	E2_Ac	KnownBoundary	0	5.25	0.00	0.00	0.00	0.00	1.61	6.98	0.00	1.55	7.51	2.97	1.23	0.00	1.84	0.00	2.91	4.21	5.39	0.00	10.34	0.00	3.99	0.00	0.00	0.00	0.00	0.00	6.02	2.05
20	ER2b	ExonRegion	0	6.67	0.73	2.24	0.00	0.00	1.68	15.45	3.89	5.37	9.30	4.76	2.34	0.43	3.73	1.87	7.59	11.91	8.79	1.01	14.68	0.32	6.21	0.20	3.82	2.22	0.70	0.81	9.42	2.09
21	ER2c	ExonRegion	0	15.53	7.64	7.41	13.29	16.25	12.08	36.70	22.31	10.53	23.59	12.15	10.05	3.58	19.99	18.40	34.43	42.85	10.57	10.56	67.70	5.99	16.70	6.33	21.07	19.34	13.37	6.89	18.28	12.93
22	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.66	2.04	2.47	0.00	0.00	1.37	0.00	3.82	2.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	E2a_E3a	KnownJunction	0	11.33	18.81	14.55	10.78	19.45	17.42	19.51	15.48	3.93	22.65	4.65	2.38	7.01	17.88	18.34	29.22	57.38	23.89	0.00	31.18	7.70	6.13	6.85	22.01	27.62	4.33	5.07	18.33	5.84
24	E2a_E4a	NovelJunction	0	2.95	0.00	1.27	0.00	7.37	0.00	2.92	2.09	1.43	0.00	0.00	0.00	0.00	1.09	8.37	3.82	3.56	4.62	0.00	17.53	0.00	4.08	0.00	3.05	7.20	0.00	0.00	0.00	0.00
25	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.61	0.00	0.00	0.00	0.00	0.00	3.15	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	2.06	0.00	0.00	2.01
26	ER3a	ExonRegion	0	23.23	6.95	16.13	22.54	30.95	17.56	17.94	10.14	15.64	17.44	10.03	5.78	3.02	25.90	23.41	27.67	41.27	8.05	4.45	55.52	7.16	11.53	6.55	19.61	20.22	6.90	16.18	12.64	10.54
27	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	2.04	0.00	0.00	0.00	0.00	0.00	0.00	1.91	0.00	0.00	3.47	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	E3a_E4a	KnownJunction	0	19.76	9.50	10.44	70.75	25.20	16.73	18.08	11.15	15.65	16.70	10.98	3.40	0.00	27.56	32.09	41.84	35.70	9.25	0.00	35.56	0.00	11.96	9.01	20.28	5.27	6.27	2.09	13.03	10.99
29	I3	Intron	0	2.95	0.00	0.21	0.00	0.00	0.52	0.25	0.00	0.14	1.27	0.45	0.39	0.00	0.23	0.00	0.93	1.31	0.48	1.20	2.07	0.71	0.00	0.23	0.81	0.18	0.39	0.23	1.02	0.00
30	I3_SR1	SilentIntronRegion	0	2.45	0.00	0.00	0.00	0.00	0.72	0.35	0.00	0.00	0.86	0.63	0.51	0.00	0.23	0.00	1.30	1.28	0.68	1.62	1.91	1.00	0.00	0.09	1.13	0.24	0.50	0.30	0.83	0.00
31	I3_AR1	ActiveIntronRegion	0	4.29	0.00	0.75	0.00	0.00	0.00	0.00	0.00	0.50	2.33	0.00	0.09	0.00	0.22	0.00	0.00	1.40	0.00	0.16	2.51	0.00	0.00	0.57	0.00	0.03	0.12	0.05	1.53	0.00
32	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.20	0.00	1.13	0.00	2.75	8.01	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
33	ER4a	ExonRegion	0	19.22	12.40	7.90	15.22	10.59	24.20	37.61	22.09	22.01	31.85	25.71	9.04	6.45	33.41	35.98	53.38	52.01	11.92	21.81	86.64	16.61	13.62	9.27	36.41	33.78	20.70	19.21	16.66	19.29
34	E4_Da	KnownBoundary	1	80.28	94.43	47.79	212.46	80.02	129.49	134.11	105.55	95.26	100.82	113.16	50.33	29.36	116.83	42.06	224.52	190.61	41.87	31.70	183.34	70.39	52.46	37.23	89.84	132.86	39.78	66.00	43.58	47.18
35	ER4b	ExonRegion	0	10.02	9.70	7.08	13.02	23.48	13.97	21.28	10.19	12.45	21.37	15.73	8.98	2.80	22.97	25.21	33.14	47.67	15.70	18.63	66.74	16.02	8.69	5.66	22.50	19.56	13.58	19.09	22.32	15.81
36	E4_Db	KnownBoundary	0	20.35	0.00	85.53	18.12	25.20	22.52	73.01	107.69	93.82	34.83	41.03	73.16	36.02	110.94	52.02	38.25	249.16	9.25	0.00	89.48	32.89	24.41	26.15	17.17	36.86	32.14	9.59	25.16	52.13
37	ER4c	ExonRegion	1	9.67	8.83	8.21	11.19	23.36	7.09	15.08	9.52	14.17	18.74	14.26	8.04	1.46	21.29	23.74	21.47	36.42	14.56	16.92	68.79	10.22	9.74	4.22	14.26	19.03	21.62	5.67	31.33	10.51
38	IG16_AR1	ActiveIntergenicRegion	0	2.00	6.63	2.72	5.01	4.55	3.20	5.16	0.86	4.66	4.63	2.11	0.86	0.74	4.30	10.89	8.49	8.15	4.04	3.72	25.12	4.94	2.10	2.11	7.01	3.66	7.20	0.43	2.66	3.29