Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ZNF136	Gene	0	28.12	34.94	17.47	53.63	54.57	43.50	52.29	31.58	32.37	52.31	40.86	21.48	5.03	33.07	24.84	34.07	54.55	31.98	51.57	61.38	34.41	18.51	18.41	45.07	30.69	14.60	33.31	24.18	17.98
2	425827	Transcript	0	0.66	1.03	0.26	0.00	0.03	1.52	0.00	1.25	0.93	0.89	0.68	1.10	0.00	0.96	0.71	1.63	2.53	0.99	0.97	3.36	1.38	0.54	1.96	0.37	2.21	0.24	0.57	0.25	2.37
3	439995	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.98	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00
4	343979	Transcript	1	9.75	28.47	13.05	26.84	30.01	34.20	37.67	16.60	34.27	24.68	15.84	12.32	4.67	16.46	20.71	16.67	36.89	23.47	39.39	51.26	26.51	10.82	9.05	27.56	15.11	8.57	17.54	8.05	12.98
5	418338	Transcript	0	0.09	1.32	0.14	0.59	0.00	0.40	0.17	0.56	0.57	0.95	0.10	0.13	0.05	0.17	0.84	0.00	1.95	0.56	1.32	0.11	0.35	0.48	0.31	0.18	0.36	0.72	0.00	0.47	0.25
6	464860	Transcript	0	1.82	2.68	0.45	0.63	0.86	0.61	0.69	1.06	1.59	2.34	0.32	0.41	0.11	0.54	0.00	1.09	3.33	0.01	1.12	0.50	1.63	0.01	0.09	1.71	0.13	1.58	0.01	1.14	0.18
7	476676	Transcript	0	0.76	3.56	0.03	1.59	0.12	0.57	0.52	0.23	2.40	2.03	0.81	0.12	0.01	0.33	0.11	2.12	1.24	0.43	3.77	1.40	1.38	0.08	0.25	0.22	0.89	0.35	0.23	1.96	0.22
8	ER1a	ExonRegion	0	8.01	7.56	1.93	80.58	45.21	6.33	8.48	1.15	1.89	13.78	6.89	3.85	0.00	3.71	3.80	16.28	4.10	15.81	16.22	6.74	3.61	7.18	18.22	2.48	0.00	2.82	1.21	4.71	0.35
9	E1_Ab	KnownBoundary	0	17.46	26.47	6.73	210.30	157.83	21.68	30.15	2.54	9.32	33.31	23.25	8.16	0.00	12.36	9.17	48.19	28.20	28.38	48.55	24.89	9.79	20.08	39.45	12.50	11.97	17.55	8.15	13.08	5.74
10	ER1b	ExonRegion	0	16.86	26.06	23.55	148.20	112.58	23.28	34.47	27.33	6.28	37.87	15.25	15.89	0.74	18.89	6.60	51.99	40.10	37.81	31.58	44.22	27.42	21.99	21.20	12.19	13.39	23.17	17.46	26.37	19.52
11	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E1a_E5b	KnownJunction	0	2.42	0.00	12.78	8.41	6.78	7.40	15.33	13.98	1.55	9.55	7.69	6.26	0.00	6.00	0.00	3.52	19.92	13.87	0.00	23.32	9.67	9.24	4.33	6.10	12.69	8.28	8.45	3.91	6.24
15	E1a_E5d	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.98	0.00	0.00	8.09	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00
16	I1_SR1	SilentIntronRegion	0	0.70	0.52	0.91	0.00	0.00	0.22	0.33	1.79	3.18	3.76	1.08	1.38	0.00	1.40	0.00	1.50	8.81	0.63	0.00	0.00	2.32	1.76	0.88	1.05	0.70	2.15	2.09	0.80	0.00
17	E2_Aa	NovelBoundary	0	0.00	3.88	0.00	0.00	0.00	0.00	0.00	0.00	1.43	1.68	0.00	2.65	0.00	0.00	0.00	0.00	16.41	4.62	8.09	0.00	3.29	2.29	0.00	0.00	6.33	2.02	0.00	0.00	1.68
18	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	1.16	0.00	1.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00	0.10	0.00	0.00	0.00	0.00	0.00	0.00
19	E2_Da	NovelBoundary	0	0.00	0.00	1.54	0.00	0.00	1.65	0.00	0.00	1.31	3.60	0.00	0.00	0.00	3.43	0.00	0.00	9.97	0.00	0.00	0.00	3.81	4.38	0.00	3.05	0.00	0.00	0.00	0.00	0.00
20	E2a_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	I2	Intron	0	0.48	1.07	0.93	0.00	0.00	0.91	0.67	0.41	1.49	3.52	1.06	0.34	0.14	0.80	1.63	0.47	8.11	0.64	1.06	0.61	3.48	0.60	0.00	1.67	1.58	1.57	2.23	2.71	0.59
22	I2_SR1	SilentIntronRegion	0	0.48	1.07	0.93	0.00	0.00	0.92	0.67	0.41	1.50	3.52	1.06	0.34	0.14	0.80	1.64	0.47	8.13	0.64	1.06	0.61	3.49	0.60	0.00	1.67	1.59	1.57	2.24	2.72	0.59
23	E3_Aa	NovelBoundary	1	17.93	26.27	12.61	0.00	0.00	21.22	10.18	4.43	30.67	20.61	6.80	8.67	1.78	10.86	8.77	9.94	31.51	0.00	0.00	3.23	18.13	8.61	4.43	16.87	14.17	9.53	6.91	29.61	12.02
24	ER3a	ExonRegion	0	0.44	2.03	0.69	2.97	0.00	0.85	0.84	1.15	1.40	4.76	0.49	0.64	0.27	0.84	4.19	0.00	8.58	2.80	6.62	0.57	1.77	0.12	1.48	0.89	1.78	3.58	0.00	2.37	1.25
25	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	1.56	0.00	0.00	0.00	0.00	0.00	0.00	10.47	0.00	8.09	3.47	0.00	0.00	0.00	0.00	3.67	0.00	1.89	1.93	1.95
26	E3a_E5b	KnownJunction	0	0.00	4.56	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00
27	E4_Aa	NovelBoundary	0	2.48	0.00	1.22	0.00	0.00	0.00	2.92	2.54	7.37	0.00	0.00	0.00	0.00	2.17	8.37	0.00	5.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.32
28	ER4a	ExonRegion	0	1.99	3.08	0.78	0.00	0.09	1.35	0.00	1.36	1.30	2.68	0.55	0.81	0.00	1.03	2.14	1.75	2.26	2.98	2.92	2.81	2.53	1.62	1.55	1.10	3.18	0.73	1.70	0.76	1.67
29	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	3.11	0.00	0.00	3.25	0.00	0.00	0.00	0.00	3.33	9.25	0.00	0.00	1.52	0.00	0.00	2.45	0.00	0.00	0.00	0.00	0.00
30	E4a_E5b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	3.22	0.00	2.39	1.49	0.00	1.49	1.27	0.00	1.84	0.00	3.14	5.33	0.00	0.00	7.28	1.60	0.00	4.33	0.00	3.45	0.00	0.00	0.00	5.45
31	I4_AR1	ActiveIntronRegion	0	1.21	0.97	0.10	0.00	0.29	0.91	0.15	0.33	3.84	1.33	0.59	0.57	0.00	0.12	3.70	0.04	3.12	0.35	0.87	0.40	1.34	0.00	0.00	1.68	0.74	0.66	0.00	0.98	0.56
32	I4_SR2	SilentIntronRegion	0	0.90	2.68	0.87	0.00	2.01	0.38	0.76	0.25	0.95	3.04	0.16	0.69	0.27	0.30	3.30	1.38	2.21	0.00	0.88	0.76	1.78	0.00	0.00	2.36	0.30	0.43	0.00	0.89	0.38
33	I4_AR2	ActiveIntronRegion	0	2.05	1.56	0.59	0.00	0.00	0.31	0.90	1.23	1.44	1.85	1.29	0.30	0.00	0.76	1.21	0.81	1.82	0.21	1.07	0.92	2.56	0.40	0.14	0.48	0.71	0.74	0.00	0.42	0.22
34	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.44	3.14	2.00	1.30	0.00	0.00	0.00	0.00	0.00	0.99	0.00	0.00	0.00	2.05	0.00	2.02	0.00	0.00	0.00	0.00	2.29	4.09
35	ER5a	ExonRegion	0	1.82	2.68	0.45	0.63	0.86	0.61	0.69	1.06	1.59	2.34	0.32	0.41	0.11	0.54	0.00	1.09	3.33	0.01	1.12	0.50	1.63	0.01	0.09	1.71	0.13	1.58	0.01	1.14	0.18
36	E5_Ab	KnownBoundary	0	2.95	0.00	0.00	0.00	0.00	0.00	2.46	0.00	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	2.00	0.00	0.00	0.00	0.00	0.00	0.00	5.74	0.00	0.00	0.00	0.00	0.00
37	ER5b	ExonRegion	0	17.54	11.57	3.77	13.13	18.11	11.06	10.77	11.00	4.06	7.84	10.68	7.34	0.00	17.44	0.51	18.23	18.49	8.81	9.46	24.59	11.80	14.71	10.27	17.55	15.27	4.11	5.87	5.82	8.63
38	E5_Ac	KnownBoundary	0	92.31	79.69	57.75	101.81	40.53	90.36	168.50	197.17	84.38	161.58	51.15	70.75	60.57	129.97	51.03	102.66	170.53	4.62	56.65	153.66	81.38	91.01	73.19	82.84	95.93	47.72	20.38	57.11	87.62
39	ER5c	ExonRegion	0	50.06	40.82	2.46	13.47	10.08	54.85	68.09	51.86	24.80	54.70	34.30	20.21	1.38	45.49	16.05	64.81	47.58	53.78	64.30	98.92	44.15	36.47	24.32	40.40	35.89	23.29	20.30	28.03	16.01
40	E5_Da	KnownBoundary	0	0.00	0.00	0.00	8.20	0.00	0.00	0.00	0.00	3.05	2.04	0.00	0.00	0.00	0.00	0.00	3.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	E5a_E5d	KnownJunction	0	46.54	64.96	4.96	10.57	33.60	55.36	118.26	47.48	11.51	101.22	87.18	27.95	4.87	47.37	25.31	92.03	75.95	90.29	89.02	94.94	57.16	13.13	48.07	47.91	28.45	48.24	27.68	53.20	44.40
42	ER5d	ExonRegion	0	0.76	3.56	0.03	1.59	0.12	0.57	0.52	0.23	2.40	2.03	0.81	0.12	0.01	0.33	0.11	2.12	1.24	0.43	3.77	1.40	1.38	0.08	0.25	0.22	0.89	0.35	0.23	1.96	0.22
43	E5_Ad	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.56	0.00	0.00	0.00	1.09	0.00	0.00	1.26	0.00	16.18	3.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
44	ER5e	ExonRegion	0	30.86	71.43	5.71	12.07	31.63	35.74	68.44	30.36	9.41	93.21	90.14	27.64	3.96	50.12	14.59	63.74	90.18	73.81	73.99	92.16	40.57	18.66	43.27	44.42	39.49	57.49	69.09	63.31	51.50
45	E5_Db	NovelBoundary	0	12.45	48.09	3.36	27.82	17.39	22.21	19.85	13.14	1.13	37.19	39.35	20.72	2.77	33.35	8.37	35.65	59.94	4.62	48.33	61.78	17.17	12.49	15.22	29.19	27.35	20.73	41.85	31.77	32.95
46	E5c_E6a	KnownJunction	0	35.21	24.24	15.20	50.26	69.41	27.82	23.86	19.96	8.44	74.58	33.75	29.94	1.97	40.90	8.37	62.58	97.87	28.51	32.37	100.89	17.85	13.18	20.34	41.75	34.02	20.94	82.50	34.64	14.69
47	ER5f	ExonRegion	1	23.96	44.44	13.07	36.13	54.80	33.80	25.02	19.82	6.48	73.55	48.30	29.54	3.97	47.70	11.20	60.59	91.22	29.22	58.57	97.22	21.56	16.75	23.08	39.99	39.10	26.16	72.72	41.81	28.98
48	E6_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.28	0.00	0.00	0.00	0.00	1.13	9.97	0.00	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER6a	ExonRegion	0	31.63	28.77	32.61	47.64	129.22	35.53	27.73	23.10	15.25	78.84	42.84	28.75	3.90	49.97	13.24	59.28	85.54	23.57	64.46	97.35	19.54	17.37	24.22	43.28	33.83	18.95	63.60	38.97	10.86
50	E6_Da	KnownBoundary	0	31.03	35.87	48.09	57.37	173.60	34.68	36.10	25.78	22.72	74.94	53.65	26.14	6.08	52.69	35.28	56.53	68.65	33.65	80.92	87.00	26.63	20.52	31.86	44.38	31.33	17.21	48.46	35.09	10.99
51	ER6b	ExonRegion	0	33.20	35.14	49.87	112.77	150.89	51.33	58.30	32.70	16.73	74.87	46.29	27.28	3.59	60.66	30.66	42.06	53.09	43.20	64.67	93.90	36.41	18.22	28.22	48.74	38.18	19.60	44.03	26.38	19.87
52	E6_Db	KnownBoundary	0	51.26	55.26	31.79	166.30	138.97	52.99	70.60	25.98	16.99	56.20	55.65	19.28	2.96	70.70	24.72	45.59	52.94	60.88	48.55	117.68	27.76	20.18	23.79	49.77	32.05	30.64	84.14	20.71	21.43
53	ER6c	ExonRegion	0	52.78	51.20	23.19	101.80	110.29	64.47	63.18	40.15	25.64	91.30	62.58	35.83	5.99	64.17	33.47	54.82	86.40	44.11	76.42	113.19	42.32	26.76	23.38	44.60	52.31	20.30	52.99	22.81	18.33
54	E6_Dc	KnownBoundary	0	60.28	59.72	22.37	48.10	69.71	63.46	47.77	41.70	27.32	76.14	61.62	34.43	7.52	60.66	48.83	33.05	81.15	32.36	64.74	105.03	67.18	31.41	36.54	48.75	37.13	30.94	47.71	28.49	22.94
55	ER6d	ExonRegion	0	53.11	58.61	33.40	96.02	95.32	79.08	99.17	62.56	57.62	97.63	81.66	40.80	9.15	61.03	44.94	60.61	100.15	57.97	89.23	106.96	63.05	35.58	34.31	87.63	60.59	25.82	64.26	47.31	33.53
56	E6_Dd	KnownBoundary	0	28.02	44.40	25.46	39.69	42.15	30.43	31.12	46.98	55.82	42.38	21.95	18.64	4.08	29.16	41.26	3.75	45.45	18.49	48.55	89.65	30.04	36.27	21.03	40.61	26.03	15.32	6.51	22.87	20.63
57	ER6e	ExonRegion	0	17.08	56.94	13.32	45.27	53.23	60.99	60.01	19.22	66.99	39.81	23.99	18.37	9.33	26.91	41.42	29.82	53.85	33.07	78.79	79.19	43.36	12.39	13.77	49.03	17.53	8.86	26.62	12.18	19.72
58	IG22	Intergenic	0	2.78	12.39	3.91	5.59	14.38	8.45	7.16	3.67	15.14	12.00	7.01	3.26	0.62	7.28	13.06	4.24	9.44	5.06	20.19	14.74	6.56	2.34	3.29	11.18	5.20	2.99	8.56	11.44	2.14
59	IG22_AR1	ActiveIntergenicRegion	0	3.04	27.33	0.00	5.08	13.77	13.63	17.13	5.22	20.69	15.34	8.43	2.63	0.92	3.84	6.53	7.03	1.04	6.82	27.15	7.26	4.04	1.28	6.40	10.67	3.04	2.23	9.08	6.93	1.90
60	IG22_SR1	SilentIntergenicRegion	0	2.76	10.34	4.47	5.68	14.50	7.76	5.79	3.46	14.42	11.58	6.84	3.36	0.58	7.79	14.03	3.86	10.65	4.83	19.30	15.84	6.93	2.50	2.87	11.29	5.52	3.11	8.52	12.11	2.18