Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	NFIX	Gene	0	10.35	20.45	25.45	4.48	3.13	32.06	3.21	8.47	20.04	69.25	9.26	22.16	14.97	41.39	14.65	25.85	29.97	46.56	15.17	8.21	50.38	20.31	73.19	92.07	45.47	52.72	19.67	11.27	58.52
2	360105	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	397661	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	438869	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	264825	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	358552	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	380945	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
8	ER1a	ExonRegion	0	3.99	0.00	8.00	0.00	0.00	5.35	0.00	1.98	0.38	12.39	1.28	8.59	5.50	11.14	6.72	4.21	7.31	18.47	1.72	1.07	9.29	6.76	18.98	18.39	5.70	11.22	0.35	3.71	7.93
9	E1a_E3b	KnownJunction	0	7.85	0.00	16.89	0.00	0.00	24.06	0.00	0.00	1.52	29.44	0.00	22.17	12.39	22.18	9.97	6.27	15.26	37.37	0.00	0.00	14.92	9.48	43.68	30.33	12.96	30.47	3.98	16.94	27.17
10	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.13	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	I1_AR7	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	3.58	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.55	0.00	0.00	2.84	1.27	0.00	0.00	0.98	0.00	0.00	0.00
12	I1_AR8	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.95	0.00	0.00	0.00	0.00	0.00
13	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00	0.00
14	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	ER2b	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	E2a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	E2b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
18	ER2c	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	0.26	0.00	0.49	0.00	0.00	0.71	0.00	0.00	0.36	1.50	0.19	1.48	0.47	0.94	0.45	0.30	1.04	1.64	0.00	0.00	0.63	0.36	2.75	1.89	0.80	1.26	0.15	0.72	0.97
20	ER3b	ExonRegion	0	15.38	17.58	32.82	5.94	3.75	45.94	5.10	11.12	9.18	82.62	11.65	42.28	21.84	69.23	9.31	36.81	45.72	57.24	16.71	5.58	57.23	33.59	112.81	93.97	50.05	65.44	17.63	14.25	58.10
21	E3a_E4a	KnownJunction	0	36.45	42.95	47.74	17.26	0.00	72.40	10.64	32.50	29.20	216.82	30.40	62.02	40.09	111.09	7.97	82.54	75.14	89.00	24.28	8.27	140.55	37.63	198.57	218.45	151.43	88.92	62.37	32.62	128.49
22	ER4a	ExonRegion	0	25.01	25.29	50.12	15.09	0.00	98.58	14.78	42.08	22.06	210.10	36.52	52.24	37.18	131.41	9.16	71.18	75.56	97.69	51.08	8.79	108.47	64.84	174.40	208.22	129.43	133.06	36.34	28.59	105.52
23	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	0.00	0.00
24	E4a_E5a	KnownJunction	0	26.19	59.04	54.14	9.06	0.00	87.06	24.09	44.69	23.97	138.97	21.95	46.02	25.16	134.65	17.74	88.89	68.00	103.26	56.42	10.83	91.49	55.13	157.80	252.18	100.05	131.32	16.30	17.03	104.78
25	ER5a	ExonRegion	0	21.95	60.14	51.41	12.68	13.28	66.68	12.98	21.26	21.78	130.25	18.72	43.11	22.15	126.35	20.54	82.74	60.53	74.09	34.34	8.39	77.84	62.11	138.85	222.51	87.04	82.52	23.61	17.78	68.90
26	E5a_E6a	KnownJunction	0	18.46	67.38	50.83	8.63	0.00	59.28	2.17	15.58	37.61	114.16	10.41	49.22	16.11	116.06	15.95	86.21	61.23	50.86	0.00	7.77	85.80	52.60	164.35	176.64	92.89	96.26	37.72	8.27	83.59
27	ER6a	ExonRegion	0	16.53	40.12	57.59	18.13	6.50	61.35	6.20	27.34	18.92	144.20	20.16	63.12	29.75	110.57	14.26	51.24	77.09	81.97	26.59	3.76	82.99	51.34	187.88	154.92	82.84	104.95	34.22	20.56	98.66
28	E6a_E7a	KnownJunction	0	13.15	47.51	47.14	20.71	5.75	53.91	10.13	15.83	10.96	132.18	10.44	63.91	26.72	85.30	37.87	26.55	84.27	70.12	56.65	0.00	62.69	37.00	157.65	136.02	58.27	89.60	29.72	24.31	84.42
29	ER7a	ExonRegion	0	13.56	41.62	48.82	8.06	7.93	41.47	4.38	13.22	19.03	98.97	12.21	44.46	20.73	72.68	4.21	40.20	64.45	82.17	17.41	4.62	54.00	50.29	127.70	111.92	48.73	92.88	16.90	15.61	79.56
30	E7a_E8a	KnownJunction	0	3.01	35.68	38.24	26.53	6.78	42.51	5.61	15.28	13.61	100.10	14.87	24.43	19.62	56.50	0.00	28.30	42.43	65.50	8.09	3.64	78.78	55.96	73.78	85.95	48.72	84.97	13.96	14.24	83.79
31	E7a_E9a	KnownJunction	0	5.78	4.85	7.42	9.27	0.00	5.10	0.00	0.00	0.00	19.33	3.07	9.67	3.47	10.15	0.00	10.02	14.54	28.64	0.00	0.00	1.93	11.28	38.41	30.80	8.41	27.47	4.27	2.29	6.57
32	E7a_E11a	NovelJunction	0	0.00	0.00	1.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.04	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.07	1.89	0.00	0.00	0.00
33	ER8a	ExonRegion	0	16.68	27.56	44.21	16.05	6.40	38.19	3.15	20.69	18.62	89.48	9.86	46.03	17.24	68.29	8.74	21.91	48.80	54.85	20.09	3.34	69.14	46.43	101.14	109.62	47.95	74.43	9.02	16.27	85.21
34	E8a_E9a	KnownJunction	0	2.65	30.83	41.36	0.00	6.93	44.24	5.38	6.62	16.26	76.50	2.85	41.32	11.50	54.06	0.00	3.37	40.79	60.88	24.28	11.08	40.67	26.30	60.58	77.46	22.69	42.96	15.61	14.56	64.01
35	E8a_E11a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.56	0.00	0.00	0.00	0.00
36	ER9a	ExonRegion	0	13.09	29.96	72.09	7.81	3.28	71.43	6.47	10.74	17.93	134.36	19.55	54.65	29.38	79.62	5.60	30.81	66.77	74.66	26.61	6.80	85.99	30.82	131.42	139.51	55.98	94.71	27.84	21.00	96.35
37	E9a_E10a	KnownJunction	0	0.00	0.00	0.92	0.00	0.00	3.64	0.00	2.09	1.43	3.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.57	0.00	0.00	5.02	1.74	0.00	0.00	0.00	0.00
38	E9a_E11a	KnownJunction	0	5.13	71.06	41.03	0.00	0.00	76.58	2.23	2.34	18.18	171.13	29.61	57.98	40.44	82.82	0.00	52.25	61.52	153.99	32.37	0.00	130.60	23.58	141.89	138.17	69.56	78.32	22.96	29.97	145.75
39	E9a_E12a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	E10_Aa	NovelBoundary	0	0.00	4.85	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
41	ER10a	ExonRegion	0	0.74	0.00	2.35	0.00	0.00	3.33	0.00	0.50	1.15	3.56	0.43	1.23	3.51	1.77	0.00	1.49	1.71	3.43	3.67	0.00	5.24	0.62	6.46	0.83	1.90	2.43	0.67	0.01	3.47
42	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.23	2.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
43	E10a_E11a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	3.07	0.00	2.04	0.00	0.00	3.58	0.00	24.28	0.00	12.92	0.00	4.58	0.00	1.33	2.19	0.00	0.00	2.97
44	E11_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.99	0.00	0.00	3.28	3.15	0.00	3.06	3.74	0.00	0.00	0.00	0.00	0.00	1.92	8.43	0.00	1.67	0.00	0.00	3.37
45	ER11a	ExonRegion	0	15.63	46.95	52.54	1.91	11.37	109.50	2.56	20.87	20.43	161.03	16.14	52.70	39.10	87.72	9.44	44.07	59.52	95.16	21.94	6.26	152.84	46.79	108.79	201.18	93.67	96.57	26.08	19.40	131.97
46	E11a_E12a	KnownJunction	0	0.00	22.88	62.76	25.24	27.12	81.34	14.25	14.83	20.22	155.71	21.23	40.54	33.34	66.65	16.54	26.09	52.90	41.87	8.09	7.69	83.95	29.61	74.86	188.66	66.45	79.82	49.05	26.64	79.33
47	ER12a	ExonRegion	0	9.25	19.13	20.53	3.38	2.62	26.15	2.61	6.54	23.04	60.67	8.02	15.53	12.70	31.32	17.31	22.86	23.51	42.23	13.90	9.63	46.20	14.88	61.14	86.90	43.37	46.80	20.58	10.13	55.98
48	IG11	Intergenic	0	2.31	3.27	1.08	0.00	0.00	1.77	0.00	0.40	0.97	0.93	0.77	0.80	0.28	3.21	11.25	3.05	2.57	8.77	5.50	1.61	6.14	3.10	1.95	4.63	8.92	18.26	2.76	4.91	5.05
49	IG11_SR1	SilentIntergenicRegion	0	2.57	3.64	1.08	0.00	0.00	1.97	0.00	0.44	0.98	1.04	0.78	0.84	0.31	3.51	12.52	3.40	2.79	9.25	5.97	1.79	6.60	3.13	1.94	4.70	9.71	19.23	2.95	5.46	5.61
50	IG11_SR2	SilentIntergenicRegion	0	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	1.12	0.00	0.89	0.31	0.00	0.68	0.00	0.00	0.33	4.55	0.38	0.00	2.38	3.61	2.56	5.38	1.43	12.18	0.61	0.00	0.00