Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TXNL4A	Gene	0	281.63	264.58	168.80	192.19	639.59	210.38	378.55	455.63	385.23	251.86	279.35	329.01	914.37	227.93	403.03	214.05	101.94	247.07	405.00	295.72	178.65	445.43	317.85	248.49	288.68	265.46	202.19	251.47	146.86
2	269601	Transcript	0	421.83	382.31	355.81	329.19	1866.87	376.02	598.11	715.64	643.37	430.92	457.35	530.25	1480.62	327.30	652.02	372.39	167.32	371.34	672.76	495.47	290.77	597.66	479.88	383.91	509.28	360.94	306.94	347.85	219.24
3	355491	Transcript	0	5.42	5.36	0.00	0.00	0.00	0.51	1.49	0.10	2.54	2.66	2.07	3.12	2.94	2.43	3.83	1.47	0.00	3.02	7.62	0.15	0.60	0.00	1.52	1.81	3.69	0.00	2.51	0.00	0.00
4	IG50_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	6.09	24.91	0.00	8.50	4.69	0.94	1.23	0.00	1.05	0.00	0.00	0.00	5.74	0.00	11.46	10.86	0.00	2.40	9.10	9.13	0.00	0.00	0.00	0.00	0.00	0.00
5	ER1a	ExonRegion	0	60.73	10.29	23.04	41.93	490.85	18.51	61.95	16.82	17.60	13.28	4.36	17.73	60.45	12.09	68.70	34.92	9.15	30.75	21.12	1.31	19.11	70.31	60.52	9.75	13.82	75.12	10.99	50.21	6.71
6	ER1b	ExonRegion	0	302.81	239.27	211.71	188.16	657.49	247.22	511.16	473.06	379.43	317.95	300.15	403.61	1041.60	225.53	458.24	284.12	120.02	317.36	419.62	310.73	214.73	462.87	424.47	219.82	307.85	376.51	195.32	349.54	184.21
7	E1_Da	NovelBoundary	0	0.00	3.97	0.00	0.00	0.00	1.73	2.69	0.00	0.00	5.03	0.00	0.00	0.00	1.11	0.00	9.94	5.15	9.25	16.18	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	2.29	0.00
8	E1a_E2a	KnownJunction	0	752.83	797.22	190.37	322.24	869.05	541.48	781.44	1037.47	1149.49	494.61	495.90	632.40	2121.31	563.40	751.83	524.93	241.39	535.68	906.36	850.31	434.03	1006.72	623.94	585.12	725.24	451.54	281.88	512.76	380.45
9	E1a_E4a	NovelJunction	0	33.39	8.05	14.28	32.35	46.86	21.64	46.57	35.08	44.70	25.05	23.47	43.28	175.14	16.42	53.62	25.55	9.93	52.78	48.55	12.40	14.72	49.01	67.57	27.34	30.50	73.13	10.68	41.83	12.18
10	I1	Intron	0	4.91	4.40	2.54	3.92	4.45	6.09	3.94	2.85	5.34	6.15	3.95	5.87	4.12	4.41	5.14	7.50	4.28	9.17	9.67	3.01	6.14	1.48	2.31	2.74	2.85	2.12	1.41	2.46	1.67
11	I1_SR1	SilentIntronRegion	0	3.39	3.12	1.37	1.64	2.42	4.29	2.16	0.85	2.95	4.34	1.77	2.09	1.36	2.81	1.26	5.72	2.80	6.53	6.43	1.81	3.94	0.63	0.96	1.04	1.55	0.85	0.69	1.00	0.29
12	I1_AR1	ActiveIntronRegion	1	31.28	21.51	20.19	17.01	12.29	35.33	55.90	56.80	36.87	37.10	46.28	51.43	83.15	31.75	50.03	42.48	15.87	40.94	60.16	42.74	41.19	33.58	46.77	32.55	38.60	26.74	25.92	8.50	19.93
13	I1_SR2	SilentIntronRegion	0	3.38	4.13	1.03	5.41	3.70	6.17	3.65	0.27	3.66	5.12	3.63	2.93	1.86	3.74	6.74	7.40	1.11	11.32	8.99	2.17	6.13	0.98	1.48	1.92	1.77	1.87	2.12	1.78	0.88
14	I1_AR2	ActiveIntronRegion	1	13.01	3.57	3.30	7.52	3.56	11.78	9.45	0.00	7.88	4.56	10.44	5.48	3.14	10.30	14.40	4.05	1.93	23.31	14.94	2.17	8.76	1.18	3.07	3.47	6.00	1.15	0.00	2.79	1.65
15	I1_SR3	SilentIntronRegion	0	6.45	4.52	2.04	8.86	5.96	5.37	1.56	1.44	5.75	4.16	4.27	4.59	2.21	3.88	5.77	8.08	2.65	9.86	8.54	0.90	6.41	0.50	0.83	1.45	2.42	1.97	0.19	2.59	0.61
16	I1_AR3	ActiveIntronRegion	0	3.94	4.93	1.40	1.36	5.65	7.41	1.15	1.29	1.68	6.88	4.09	5.98	0.62	3.61	0.52	6.73	3.83	7.48	10.53	2.55	5.38	0.59	0.38	1.94	1.47	1.32	0.70	2.59	0.32
17	I1_SR4	SilentIntronRegion	0	3.09	3.15	3.39	2.07	7.04	7.35	4.07	1.06	2.42	6.79	4.11	5.40	2.24	4.34	0.00	5.72	7.76	4.69	1.84	0.00	7.82	1.04	0.52	1.24	1.65	3.18	1.58	4.23	1.40
18	I1_AR4	ActiveIntronRegion	0	0.00	6.57	0.00	0.00	0.00	4.67	0.54	0.00	0.97	2.89	0.00	3.63	0.00	2.48	1.49	0.00	3.01	4.37	0.00	0.00	0.19	0.00	0.00	0.00	0.00	3.04	0.00	1.63	1.88
19	I1_AR5	ActiveIntronRegion	0	6.81	2.85	3.44	4.22	4.27	3.36	2.67	3.24	5.96	4.59	2.15	6.32	1.24	4.25	8.15	5.90	6.45	6.70	5.28	2.31	4.67	0.37	0.80	2.87	1.16	2.10	0.50	4.55	3.48
20	I1_SR5	SilentIntronRegion	0	3.06	5.78	1.94	2.05	3.26	3.79	1.62	1.38	6.66	4.38	2.90	6.27	3.23	3.51	4.53	4.36	4.79	6.20	9.64	1.58	2.97	0.00	1.08	1.69	2.11	2.07	1.00	2.77	1.89
21	I1_AR6	ActiveIntronRegion	0	2.14	6.10	2.24	0.00	14.94	1.37	4.03	0.00	13.64	2.89	1.19	4.95	0.00	1.81	0.00	2.17	6.15	5.46	10.34	5.62	1.43	0.00	0.00	2.15	1.43	0.00	0.00	0.00	4.79
22	I1_SR6	SilentIntronRegion	0	2.18	3.39	2.01	3.41	5.01	5.84	2.57	0.88	4.99	6.44	1.25	5.13	1.48	3.34	3.41	7.59	7.15	11.20	9.00	2.52	5.76	0.00	1.38	3.20	1.81	0.45	0.17	2.48	1.71
23	I1_AR9	ActiveIntronRegion	0	3.87	5.91	4.36	2.88	4.90	7.45	2.83	1.11	8.89	9.28	1.91	7.69	3.12	5.08	9.04	10.04	3.90	8.12	16.68	0.40	7.73	0.72	1.09	3.02	1.15	0.95	0.00	1.64	1.34
24	I1_SR8	SilentIntronRegion	0	6.56	3.96	2.05	0.00	9.00	0.00	2.48	1.13	0.00	2.66	0.00	2.65	2.39	2.23	0.00	1.52	0.92	3.55	3.93	3.39	4.38	0.00	0.00	0.00	3.50	0.97	0.00	3.00	0.82
25	I1_AR10	ActiveIntronRegion	0	1.13	0.00	0.88	15.08	2.57	2.89	1.06	0.00	6.50	3.04	0.63	4.87	0.00	0.95	0.00	6.52	0.00	14.52	5.04	0.00	1.50	0.00	0.00	0.00	1.50	0.00	0.00	0.86	0.00
26	E2_Aa	NovelBoundary	0	8.14	26.47	1.22	0.00	7.07	11.78	4.75	2.54	15.01	8.51	0.00	4.25	1.78	6.80	9.97	20.58	3.29	13.87	24.28	0.00	11.79	4.33	0.00	10.53	6.59	0.00	0.00	1.98	0.00
27	ER2a	ExonRegion	0	784.14	745.14	505.34	556.39	2207.59	687.19	1033.91	1509.99	1086.21	705.34	832.56	983.25	2634.52	719.31	1054.69	631.90	315.95	664.53	1043.12	936.52	520.40	1274.61	816.90	766.84	804.22	610.11	539.47	595.56	410.01
28	E2_Da	NovelBoundary	0	0.00	0.00	1.40	0.00	0.00	1.96	0.00	0.00	0.00	3.40	2.78	6.39	0.00	1.11	0.00	3.44	1.98	9.25	8.09	0.00	3.85	0.00	2.51	0.00	1.44	0.00	0.00	0.00	0.00
29	E2a_E4a	KnownJunction	0	973.32	906.68	917.64	784.69	4625.69	952.78	1448.05	1774.95	1586.48	1085.52	1142.89	1322.87	3653.41	785.30	1555.69	925.10	415.12	891.95	1649.96	1250.91	714.81	1355.16	1133.83	931.63	1275.37	801.77	734.48	797.80	537.39
30	I2	Intron	0	0.64	4.10	1.17	0.72	4.40	3.58	0.20	1.10	4.71	4.91	1.79	3.02	2.40	0.45	5.42	2.95	3.43	6.81	7.67	1.03	3.28	0.00	0.90	2.37	2.43	0.47	0.18	0.98	1.27
31	I2_AR1	ActiveIntronRegion	0	0.41	1.48	1.19	1.37	6.03	4.45	0.00	0.53	3.56	5.44	1.22	4.06	2.24	0.00	4.72	2.99	4.61	4.20	8.46	0.29	3.09	0.00	0.29	2.51	1.43	0.60	0.00	0.94	1.12
32	I2_SR1	SilentIntronRegion	0	0.91	7.03	1.16	0.00	2.65	2.65	0.43	1.75	6.04	4.39	2.42	1.90	2.59	0.96	6.27	2.94	2.18	9.76	6.87	1.85	3.53	0.00	1.60	2.24	3.56	0.33	0.39	1.03	1.45
33	ER3a	ExonRegion	0	5.42	5.36	0.00	0.00	0.00	0.51	1.49	0.10	2.54	2.66	2.07	3.12	2.94	2.43	3.83	1.47	0.00	3.02	7.62	0.15	0.60	0.00	1.52	1.81	3.69	0.00	2.51	0.00	0.00
34	I3	Intron	0	3.26	3.66	1.17	1.96	2.09	2.89	1.81	1.87	8.94	4.33	1.81	2.67	1.57	1.97	3.62	3.78	3.38	5.77	3.36	0.51	3.11	0.35	0.71	2.52	4.24	0.74	0.86	1.40	0.76
35	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	5.41	0.00	1.04	0.00	1.22	0.90	4.97	1.12	1.21	2.05	0.87	0.00	1.21	0.00	5.95	6.52	0.00	0.74	2.74	0.00	0.00	3.97	0.66	0.00	2.93	0.70
36	I3_AR2	ActiveIntronRegion	0	4.02	3.96	2.59	0.88	1.37	2.73	1.13	1.62	6.86	6.19	1.79	1.24	1.36	1.74	6.19	1.74	3.88	6.70	2.24	0.00	2.20	0.25	1.27	2.72	4.13	0.44	0.35	1.68	0.94
37	I3_SR2	SilentIntronRegion	0	3.44	5.18	0.96	1.24	2.48	3.23	1.57	1.96	9.59	4.02	1.83	2.68	1.01	1.73	4.70	4.74	3.42	5.31	3.47	0.47	3.38	0.04	0.17	2.19	4.32	1.02	0.82	1.39	0.77
38	I3_AR3	ActiveIntronRegion	0	3.59	2.85	0.40	3.98	4.37	4.09	4.79	3.39	17.74	3.64	2.95	7.01	4.16	3.35	0.00	7.89	5.26	7.50	5.14	1.29	6.63	0.75	0.87	4.87	6.85	0.85	0.44	1.49	0.80
39	E4_Aa	NovelBoundary	0	5.01	4.46	2.69	9.49	14.44	5.37	5.09	10.70	10.93	7.43	1.55	5.96	0.00	7.27	0.00	10.71	7.59	4.62	0.00	0.00	11.55	0.00	0.00	8.49	1.93	0.00	0.00	6.47	0.00
40	ER4a	ExonRegion	0	231.43	229.96	126.76	160.97	484.06	156.78	284.32	355.16	326.01	193.95	224.78	250.14	728.00	184.50	331.65	157.15	77.70	191.33	347.19	234.19	138.38	367.50	245.31	210.36	238.67	205.93	175.36	195.55	113.60
41	IG49	Intergenic	0	3.15	3.65	13.03	7.38	24.41	9.59	5.48	7.31	23.80	13.26	19.59	26.54	12.90	12.23	7.51	12.01	8.01	9.15	20.89	3.01	11.11	10.47	8.50	16.28	10.71	16.86	13.86	20.96	5.60
42	IG49_AR7	ActiveIntergenicRegion	0	3.78	4.31	16.28	9.31	30.34	11.21	6.17	8.88	27.07	15.93	22.07	30.34	15.43	14.30	8.11	14.76	9.28	10.12	24.00	3.29	13.36	12.54	9.73	17.55	12.86	20.55	16.47	25.85	6.57
43	IG49_SR1	SilentIntergenicRegion	0	0.77	1.13	0.60	0.00	1.75	3.46	2.90	1.32	11.46	3.11	10.26	12.19	3.26	4.38	5.29	1.53	3.22	5.54	9.15	1.98	2.56	2.59	3.90	11.57	2.57	2.82	3.95	2.34	1.92