Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ADNP2	Gene	0	40.74	95.83	93.62	75.17	82.98	103.69	57.19	105.90	34.41	97.62	151.16	99.55	109.27	91.59	34.28	57.16	38.44	86.35	130.31	53.36	147.43	48.33	139.10	47.00	40.53	83.55	118.48	56.16	62.24
2	262198	Transcript	0	29.10	58.78	37.89	35.21	45.38	90.05	30.99	53.31	11.13	80.10	119.04	59.27	46.08	87.20	9.12	45.71	19.12	69.16	99.39	43.37	115.56	33.63	108.63	26.64	28.51	48.45	48.51	33.35	27.84
3	IG2_AR2	ActiveIntergenicRegion	0	1.21	0.00	0.37	0.00	0.00	0.00	0.00	0.49	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.40	0.00	0.85	1.33	0.04	0.00	0.81	0.54	0.59	0.00	0.62	0.00
4	IG2_AR3	ActiveIntergenicRegion	0	0.00	0.00	0.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.68	0.00	0.00	0.00	0.00	3.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00
5	IG2_AR4	ActiveIntergenicRegion	0	4.92	2.50	1.93	6.71	6.86	1.29	0.96	1.44	0.53	2.00	0.56	2.29	1.79	6.73	6.47	2.32	1.99	0.00	0.00	5.16	4.91	3.29	0.00	2.45	1.63	3.75	0.47	4.52	1.56
6	IG2_AR6	ActiveIntergenicRegion	0	0.90	0.00	1.40	2.88	0.00	0.00	0.63	1.54	0.47	0.00	0.00	1.51	0.28	2.37	0.00	1.04	0.60	1.61	1.34	0.00	2.39	0.00	0.00	1.80	0.34	0.00	0.00	2.04	0.84
7	ER1a	ExonRegion	0	1.12	5.51	1.54	7.69	6.53	15.51	4.84	4.16	0.43	3.00	2.13	3.64	1.36	1.80	0.72	5.08	0.58	2.86	7.45	1.55	19.57	1.33	3.64	0.52	0.43	12.48	0.92	5.29	1.87
8	E1a_E2a	KnownJunction	0	8.08	16.00	8.97	9.92	13.56	82.38	13.22	25.08	4.08	35.71	34.26	10.87	15.86	28.23	7.57	19.35	5.85	47.01	40.46	23.65	120.61	9.04	41.42	11.42	5.80	29.70	9.09	4.58	14.49
9	ER2a	ExonRegion	0	27.35	39.34	32.73	16.44	28.74	105.97	31.60	38.74	3.96	60.38	122.70	53.70	30.60	73.28	11.25	43.29	13.01	55.40	121.64	42.88	140.13	30.75	100.59	24.52	25.14	81.62	40.08	42.29	17.74
10	E2_Da	NovelBoundary	0	2.42	4.56	2.09	0.00	0.00	3.49	0.00	0.00	2.68	3.36	1.33	4.85	0.00	3.63	0.00	0.00	1.13	9.12	0.00	0.00	0.00	0.00	2.02	0.00	3.11	0.00	0.00	3.77	0.00
11	E2a_E3a	KnownJunction	0	18.88	31.41	43.97	28.26	58.51	75.55	28.78	32.70	10.66	74.62	101.14	51.47	34.93	115.06	0.00	49.04	20.39	83.99	64.74	47.97	84.27	30.48	111.60	13.64	30.80	38.75	6.76	26.28	17.23
12	I2	Intron	0	1.72	1.40	0.58	0.52	0.92	2.03	0.59	0.63	1.99	2.09	1.45	1.29	0.68	1.03	1.46	1.34	1.03	2.52	4.16	0.55	3.29	0.32	0.66	0.63	0.57	0.38	0.23	0.97	0.45
13	I2_SR1	SilentIntronRegion	0	0.88	0.86	0.34	0.27	0.92	1.96	0.38	0.36	1.26	1.37	0.68	0.61	0.56	0.61	1.61	0.63	0.78	1.72	4.61	0.16	3.49	0.17	0.58	0.28	0.51	0.24	0.10	0.73	0.24
14	I2_AR1	ActiveIntronRegion	0	0.95	0.00	1.11	0.85	0.00	2.59	1.16	1.47	3.08	3.50	1.77	1.52	1.72	1.40	3.83	3.40	1.06	4.06	1.41	0.00	1.84	0.40	1.15	2.98	0.00	0.35	0.00	0.72	0.74
15	I2_AR2	ActiveIntronRegion	0	0.90	0.00	0.00	4.26	0.00	1.34	1.11	0.77	0.95	3.35	4.98	0.79	1.06	0.48	0.09	1.91	0.47	3.04	2.67	0.00	4.02	0.00	1.57	4.14	0.00	0.66	0.77	0.68	0.56
16	I2_SR2	SilentIntronRegion	0	8.43	4.63	1.81	1.47	0.91	0.59	1.88	4.21	7.19	2.80	0.93	4.97	0.72	2.68	0.00	2.77	2.53	2.96	3.72	2.40	5.11	2.11	1.47	0.00	0.80	1.02	0.34	2.33	0.25
17	I2_AR3	ActiveIntronRegion	0	3.56	2.09	1.12	1.27	0.00	2.90	0.37	0.12	2.03	3.70	4.74	3.02	1.38	1.52	1.45	1.26	1.09	3.96	3.78	0.34	3.28	0.45	0.95	1.40	0.40	0.07	0.17	0.96	0.99
18	I2_SR3	SilentIntronRegion	0	1.43	2.10	0.52	0.00	1.76	2.12	0.72	0.47	2.42	2.52	1.40	1.17	0.33	1.44	1.04	2.39	1.30	3.36	4.10	1.42	2.49	0.19	0.28	0.33	0.95	0.73	0.56	1.34	0.69
19	E3_Aa	NovelBoundary	0	3.01	9.70	2.37	0.00	0.00	3.91	0.00	0.00	4.14	3.91	2.66	7.35	0.00	1.37	0.00	0.00	1.24	5.39	0.00	0.00	2.01	0.00	0.00	5.20	1.74	0.00	0.00	4.58	0.00
20	ER3a	ExonRegion	0	42.27	86.87	38.56	72.48	66.20	122.61	41.70	62.39	12.30	133.89	183.46	88.05	60.20	134.47	5.73	70.41	25.73	111.02	100.57	75.39	151.88	47.91	139.08	41.97	40.70	41.70	58.36	40.68	33.30
21	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.18	0.00	2.05	0.00	0.00	2.57	0.00	0.00	0.00	0.00	0.00
22	E3a_E4a	KnownJunction	0	61.23	126.42	34.63	28.69	52.32	116.83	33.76	92.17	7.73	146.36	224.42	97.26	57.29	157.91	0.00	70.68	25.37	89.39	218.27	54.09	132.97	62.72	211.38	42.41	52.05	43.90	91.74	52.75	40.67
23	I3_AR1	ActiveIntronRegion	0	1.88	0.00	0.00	0.00	0.00	0.00	0.00	0.82	0.00	0.85	0.00	0.82	0.00	0.00	0.00	0.00	0.00	1.71	1.42	0.64	1.98	0.00	0.80	0.95	0.00	0.70	0.00	0.71	0.00
24	I3_SR3	SilentIntronRegion	0	0.44	2.74	0.00	0.00	0.00	1.50	0.00	2.32	0.00	0.00	0.31	0.00	1.30	0.00	0.00	0.00	0.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	I3_AR3	ActiveIntronRegion	0	2.19	0.00	0.00	0.00	0.00	0.92	0.00	0.44	0.00	0.00	0.43	0.67	0.52	0.00	0.00	0.90	0.11	1.12	1.16	0.00	0.52	0.00	0.65	0.00	0.00	0.00	0.00	0.59	0.00
26	E4_Aa	NovelBoundary	0	0.00	0.00	1.02	0.00	0.00	1.92	0.00	0.00	0.00	0.00	0.00	3.04	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00
27	ER4a	ExonRegion	0	44.76	105.89	104.83	83.03	91.82	111.51	63.03	117.95	38.78	106.72	165.19	109.90	122.29	99.63	38.54	62.13	42.87	94.47	142.58	58.05	159.47	53.18	152.74	52.01	44.66	91.03	132.61	61.56	69.57
28	IG3_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	0.00	0.00	7.69	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	0.00