Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	HDHD2	Gene	0	52.96	93.63	213.28	146.16	119.98	85.20	144.04	73.95	81.13	170.57	156.80	160.69	157.05	106.10	201.57	97.48	106.98	113.20	131.82	164.86	71.49	78.64	94.25	118.30	140.65	155.87	117.70	211.53	74.72
2	300605	Transcript	0	108.61	168.37	392.43	225.36	219.58	164.37	282.48	155.60	133.18	323.71	306.34	298.95	291.20	201.62	301.13	182.60	202.03	214.50	241.12	303.07	132.61	160.32	188.53	213.93	284.88	315.00	211.74	426.82	143.48
3	IG30_AR5	ActiveIntergenicRegion	0	0.00	0.00	0.00	7.31	0.00	0.23	0.00	1.84	1.12	0.00	0.60	0.00	0.00	0.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.51	1.43	0.00	0.00	0.00	0.00	0.00
4	IG30_SR4	SilentIntergenicRegion	0	0.21	1.89	0.66	8.37	8.04	3.05	3.17	2.04	5.91	4.90	2.96	2.78	1.88	2.67	3.60	3.17	3.44	1.92	8.16	5.40	1.84	0.89	1.05	5.67	1.96	2.85	3.96	4.32	1.57
5	IG30_AR4	ActiveIntergenicRegion	0	1.01	3.03	2.06	13.54	12.25	3.22	5.20	4.04	11.28	7.10	5.64	4.91	1.80	3.65	3.92	1.17	3.11	0.23	10.84	5.90	3.83	2.34	3.59	8.09	4.69	6.98	1.30	8.46	2.92
6	IG30_SR2	SilentIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	2.53	0.45	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	IG30_AR2	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.24	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1a	ExonRegion	0	25.86	36.43	261.41	295.36	205.98	51.98	98.89	39.47	27.71	89.68	49.91	173.14	116.03	63.16	111.56	122.26	80.74	119.93	49.82	90.15	49.38	60.18	74.93	27.07	35.79	177.81	61.36	253.01	73.31
9	E1a_E2a	KnownJunction	0	16.75	8.63	55.78	41.20	22.11	20.41	37.08	19.16	26.95	48.01	35.18	43.25	24.17	14.96	46.44	34.96	21.65	27.74	8.09	59.79	9.31	6.17	11.57	31.16	42.13	66.26	82.45	66.68	27.14
10	E1a_E5a	NovelJunction	0	2.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.64	0.00	0.00	0.00	0.91	0.00	0.00	1.22	4.62	0.00	0.00	0.00	0.00	0.00	2.63	1.82	0.00	0.00	0.00	0.00
11	I1	Intron	0	2.38	5.11	0.71	2.18	3.31	3.53	1.68	1.00	4.87	3.92	2.39	3.51	2.03	2.00	8.25	3.34	6.54	9.38	5.49	3.17	5.19	0.39	0.68	2.64	1.63	2.41	1.06	2.32	0.91
12	I1_AR1	ActiveIntronRegion	0	3.50	3.05	0.55	0.00	2.64	1.31	0.00	1.90	1.61	2.51	1.16	1.38	0.96	2.02	2.20	1.20	3.53	7.04	1.39	3.01	2.86	0.39	0.59	1.46	0.78	2.51	0.00	2.41	0.65
13	I1_SR1	SilentIntronRegion	0	1.87	4.02	1.02	0.00	1.51	1.94	1.23	0.88	1.95	3.65	0.91	3.15	1.73	1.51	8.17	1.14	3.95	7.65	5.04	3.35	4.70	1.10	0.40	1.23	1.22	3.20	2.81	3.24	0.00
14	I1_AR2	ActiveIntronRegion	0	1.63	2.19	0.00	0.00	0.00	0.00	0.00	1.75	1.12	1.65	0.00	0.00	0.00	0.30	0.00	0.00	0.00	5.46	13.15	0.00	3.60	0.00	2.41	0.00	1.43	0.00	0.00	1.63	0.00
15	I1_SR2	SilentIntronRegion	0	1.87	4.94	0.54	1.61	2.20	3.55	1.56	0.41	5.09	3.20	2.61	3.36	1.45	1.58	5.46	2.88	6.65	9.93	5.85	3.58	6.44	0.27	0.72	2.02	1.36	1.80	1.01	1.95	1.00
16	I1_AR3	ActiveIntronRegion	0	1.77	7.07	0.46	2.85	2.85	4.08	1.10	0.33	2.33	3.94	2.61	2.99	1.41	1.50	3.29	3.04	4.83	12.03	7.59	2.43	6.14	0.00	0.59	1.63	1.27	2.04	1.67	1.19	1.15
17	I1_AR4	ActiveIntronRegion	0	7.12	11.10	2.58	13.85	12.64	5.62	3.73	4.26	15.93	14.16	5.96	14.27	10.62	6.13	31.84	11.08	22.90	13.43	9.10	5.80	5.83	3.09	2.17	8.84	7.69	11.79	2.12	8.92	3.14
18	I1_SR4	SilentIntronRegion	0	2.11	1.71	0.78	2.37	0.81	3.22	1.78	2.59	5.24	3.16	1.57	2.44	2.19	1.21	13.34	3.85	5.02	5.84	2.37	1.32	2.61	0.17	0.30	2.23	1.74	1.68	0.45	1.90	0.52
19	I1_AR5	ActiveIntronRegion	0	1.57	5.31	0.80	0.00	0.00	1.54	1.63	0.64	5.36	6.09	1.25	3.61	0.00	0.91	13.92	4.06	3.84	8.32	1.12	0.00	2.12	0.00	0.63	1.84	0.68	0.55	0.00	1.13	0.61
20	E2_Aa	NovelBoundary	0	13.74	0.00	1.49	0.00	0.00	3.34	0.00	0.00	5.88	0.00	4.43	4.22	1.43	0.00	0.00	3.44	4.16	10.02	0.00	3.97	3.21	2.48	0.00	8.08	5.53	0.00	0.00	0.00	2.05
21	ER2a	ExonRegion	0	64.48	60.61	95.52	88.21	39.40	138.79	166.05	100.60	53.99	196.16	186.18	151.22	150.56	122.08	197.03	142.84	98.72	145.80	121.22	242.30	107.25	124.76	87.15	118.86	148.32	180.88	102.98	181.20	71.74
22	E2_Da	NovelBoundary	0	22.89	43.53	20.08	21.35	20.78	44.70	51.44	16.27	37.00	69.43	67.79	53.07	61.40	31.66	84.11	77.19	33.67	102.49	48.33	25.72	37.18	14.15	26.89	36.61	34.06	26.52	4.22	14.20	15.42
23	E2a_E3a	KnownJunction	0	76.39	93.75	98.02	82.83	71.77	290.17	395.47	97.89	101.62	378.88	332.23	295.08	252.02	165.47	317.52	293.91	172.92	310.16	258.73	365.28	175.00	111.67	159.08	131.95	237.50	320.53	118.18	395.35	126.08
24	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.16	0.00	0.00	1.81	0.00	0.00	0.00	0.00	0.00	5.39	8.09	0.00	2.05	0.00	0.00	0.00	0.00	1.63	0.00	0.00	3.17
25	I2_AR1	ActiveIntronRegion	0	0.00	0.00	0.81	0.00	0.00	0.00	1.85	0.00	1.37	0.72	1.09	0.55	0.00	0.91	0.00	0.00	0.00	10.01	18.10	2.03	0.00	0.00	1.31	0.78	1.43	0.00	0.00	0.63	0.00
26	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.92	0.00	1.72	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.64	0.00	0.00	0.00	0.00
27	ER3a	ExonRegion	0	135.45	160.24	494.51	317.28	304.52	266.57	338.12	149.13	130.69	438.35	445.00	342.76	292.17	257.10	299.81	233.70	237.91	236.80	276.49	442.78	178.04	175.50	209.97	270.92	330.95	317.69	258.88	459.98	140.51
28	E3a_E4a	KnownJunction	0	131.77	146.88	466.26	275.22	261.73	205.11	291.80	145.96	150.71	424.18	506.63	376.05	318.89	272.26	345.62	219.93	300.45	215.89	380.35	369.83	172.59	194.96	263.39	254.34	330.51	298.51	313.14	525.29	157.84
29	E3a_E5a	NovelJunction	0	2.65	0.00	2.82	0.00	0.00	1.76	9.96	0.00	0.00	2.04	0.00	0.00	1.53	1.02	0.00	0.00	3.04	5.39	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.65
30	I3_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	2.42	0.00	0.00	0.72	0.00	0.00	0.15	2.07	1.72	0.00	0.00	0.00	3.88	2.14	1.33	0.49	0.00	0.62	0.06	0.81	0.66	1.13	0.00	0.83
31	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
32	ER4a	ExonRegion	0	184.26	280.69	528.64	326.83	264.61	246.78	436.52	221.19	184.52	574.45	557.91	408.72	498.91	333.01	407.26	262.51	293.26	310.42	430.22	471.04	215.99	252.04	315.21	334.34	530.47	431.18	288.95	587.10	241.97
33	E4_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.66	1.64	0.00	0.00	0.00	0.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	E4a_E5a	KnownJunction	0	234.29	347.18	474.85	321.81	217.37	213.13	370.47	300.79	228.00	407.01	402.64	342.49	498.17	331.29	354.99	253.44	241.01	298.47	396.53	519.19	209.18	282.42	240.19	437.25	571.38	368.98	262.01	500.49	204.35
35	I4_AR1	ActiveIntronRegion	0	2.14	0.00	0.00	7.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
36	E5_Aa	NovelBoundary	0	0.00	0.00	1.42	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.19	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.36	0.00	0.00	0.00
37	ER5a	ExonRegion	0	160.63	244.82	531.44	336.38	212.97	164.73	348.95	242.36	178.32	409.00	350.45	384.29	422.28	285.84	376.32	216.78	270.21	287.12	316.14	385.18	151.28	229.88	269.11	282.23	393.94	417.50	255.87	543.16	217.40
38	E5a_E6a	KnownJunction	0	93.55	164.04	483.47	213.10	255.84	108.70	301.29	155.87	130.21	334.22	264.47	406.44	318.79	183.79	301.37	160.80	195.31	268.29	299.20	259.01	101.52	138.66	217.29	211.15	252.66	398.84	182.09	493.84	142.88
39	E6_Aa	NovelBoundary	0	2.77	0.00	1.27	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	ER6a	ExonRegion	0	124.62	236.00	707.40	199.84	349.18	153.32	331.56	233.87	184.78	361.94	335.68	419.40	374.22	238.60	379.88	166.12	283.97	255.39	241.21	327.97	138.45	191.65	252.53	266.61	334.73	470.88	292.19	644.68	191.62
41	E6_Da	NovelBoundary	0	0.00	0.00	1.42	0.00	0.00	1.65	0.00	0.00	1.55	2.04	2.97	1.45	0.00	1.68	0.00	11.17	0.00	4.62	0.00	0.00	5.25	0.00	0.00	5.44	0.00	1.63	0.00	0.00	0.00
42	E6a_E7a	KnownJunction	0	150.35	360.27	821.25	363.87	592.58	246.59	498.46	296.21	279.83	482.78	459.62	473.55	451.71	316.40	630.45	227.89	385.61	267.52	291.10	345.68	186.15	294.33	320.17	358.12	447.69	591.66	472.57	821.03	243.64
43	I6	Intron	0	3.55	2.95	1.36	0.00	3.59	2.02	2.07	0.24	2.55	5.47	3.60	2.07	0.51	2.70	1.93	3.45	3.73	6.41	5.29	1.05	4.31	0.81	1.19	2.77	2.22	1.28	0.72	2.57	0.46
44	I6_SR1	SilentIntronRegion	0	4.25	0.98	1.20	0.00	4.47	0.88	0.65	0.08	2.80	4.01	3.34	2.48	0.00	1.15	1.25	2.14	3.40	8.60	2.71	1.04	4.26	0.14	0.72	1.03	1.95	1.06	0.88	1.76	0.03
45	I6_AR1	ActiveIntronRegion	0	4.44	5.04	1.10	0.00	2.71	2.22	2.65	0.19	2.53	9.30	3.22	2.22	0.54	2.85	3.51	3.77	4.88	5.07	7.89	1.12	5.49	1.85	2.12	3.79	2.76	1.62	0.94	2.98	1.00
46	I6_SR2	SilentIntronRegion	0	0.72	0.97	2.05	0.00	3.44	1.29	1.17	0.43	1.48	2.34	4.01	1.96	0.95	2.93	0.00	3.14	3.06	3.56	4.38	0.13	3.06	0.42	0.85	3.11	2.40	0.51	0.00	2.85	0.36
47	I6_AR2	ActiveIntronRegion	0	2.41	3.56	1.71	0.00	3.84	3.96	3.87	0.48	2.78	2.77	4.47	1.23	1.05	4.86	1.32	5.22	2.61	6.85	5.40	1.45	3.02	0.24	0.47	3.62	1.60	1.48	0.48	3.04	0.25
48	E7_Aa	NovelBoundary	0	8.32	4.27	0.00	0.00	6.34	1.84	5.84	2.29	1.31	3.99	0.00	4.34	0.00	0.91	0.00	3.67	2.30	9.25	8.09	4.05	14.64	0.00	0.00	2.81	1.63	7.17	0.00	3.86	2.71
49	ER7a	ExonRegion	0	13.47	49.24	83.03	67.79	56.45	30.56	57.65	20.33	54.01	63.53	56.50	70.00	67.61	37.13	146.46	38.68	44.57	44.92	65.40	61.76	29.74	21.99	30.34	57.08	47.39	54.32	61.96	76.78	26.78
50	IG29	Intergenic	0	0.91	1.47	1.11	2.14	2.02	2.19	0.90	0.38	2.54	4.69	1.33	2.29	1.14	2.09	3.30	3.16	5.47	2.23	2.27	1.29	2.36	0.43	0.39	2.62	1.28	1.17	0.88	2.92	0.28
51	IG29_AR3	ActiveIntergenicRegion	0	0.70	1.05	0.55	1.28	1.54	1.87	1.37	0.00	1.89	3.79	1.20	1.27	0.36	1.52	1.91	2.00	3.82	1.53	1.89	0.50	1.83	0.11	0.24	1.53	0.47	0.61	0.60	1.66	0.12
52	IG29_SR3	SilentIntergenicRegion	0	0.69	1.17	1.01	1.45	3.03	2.78	0.42	0.22	1.93	5.10	1.49	2.05	1.34	2.06	3.46	2.84	5.83	2.32	1.81	0.71	2.18	0.36	0.47	2.18	1.73	0.81	0.96	2.15	0.30
53	IG29_AR2	ActiveIntergenicRegion	0	0.25	1.68	1.76	5.04	1.72	2.42	1.18	0.22	4.27	7.10	0.70	4.63	0.99	2.92	4.94	6.61	8.23	5.01	2.62	2.55	3.18	0.42	0.21	3.03	2.35	2.40	1.50	7.07	0.16
54	IG29_SR2	SilentIntergenicRegion	0	0.69	4.64	1.12	1.83	0.00	0.26	0.00	1.06	2.23	4.67	3.57	1.26	0.86	1.53	0.00	3.13	5.13	1.44	1.86	0.41	1.03	0.00	0.96	3.89	2.08	0.76	0.00	1.68	0.85
55	IG29_AR1	ActiveIntergenicRegion	0	2.33	2.30	1.53	1.97	1.44	1.70	0.58	1.28	4.15	5.09	1.07	3.50	2.04	3.15	3.84	3.92	7.61	2.32	4.13	2.50	3.50	1.22	0.85	4.60	1.51	1.95	1.14	4.14	0.62
56	IG29_SR1	SilentIntergenicRegion	0	0.85	2.38	3.11	6.67	2.82	2.89	0.82	1.38	2.74	3.72	2.46	3.32	3.30	2.01	8.34	4.73	4.62	1.81	1.73	4.30	2.78	1.01	0.00	5.69	1.88	2.59	0.92	5.10	0.50