Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ANKRD29	Gene	0	3.78	31.66	13.48	6.16	20.17	43.40	33.78	1.78	25.06	50.33	17.16	19.63	3.42	9.86	19.86	34.26	36.38	23.69	26.24	16.41	9.69	16.19	8.01	11.64	16.67	12.63	4.64	1.74	21.81
2	399631	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	1.46	0.00	0.00	0.00	0.00	0.65	0.81	0.00	0.00	0.00	0.00	0.00	0.00	4.09	0.00	2.21	0.00	0.00	0.85	0.00	0.00	0.00	0.00
3	322980	Transcript	0	1.00	22.10	2.96	4.11	8.49	29.02	20.27	0.78	22.72	30.10	13.91	12.72	2.69	7.54	19.42	19.64	23.83	12.58	15.68	12.36	6.97	7.05	3.22	10.94	8.70	5.87	2.31	0.31	12.72
4	399636	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	284207	Transcript	0	3.01	3.78	10.26	0.00	7.07	15.81	10.99	5.08	5.69	19.93	26.54	4.37	7.55	3.88	15.95	14.15	24.08	13.87	8.09	3.64	11.43	7.00	4.68	7.48	10.61	16.01	24.30	2.29	19.08
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1b	ExonRegion	0	0.55	2.27	8.35	0.00	0.00	5.33	6.28	1.65	1.24	12.01	1.60	2.84	0.76	0.66	1.34	8.81	10.96	6.72	3.83	2.97	0.66	4.20	2.11	0.00	1.00	3.55	0.53	1.90	5.90
8	E1a_E3a	KnownJunction	0	2.18	4.85	4.29	0.00	0.00	31.42	5.21	0.00	1.31	13.30	1.61	3.95	0.00	0.00	0.00	14.08	2.05	9.25	0.00	9.92	2.05	4.86	2.46	0.00	9.21	4.29	0.00	0.00	7.89
9	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
10	I2	Intron	0	0.00	0.00	0.65	0.00	0.00	2.40	0.00	0.00	0.65	2.80	0.00	0.36	0.00	0.00	1.06	3.23	2.61	0.37	0.62	0.53	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.26
11	I2_SR1	SilentIntronRegion	0	0.00	0.00	0.65	0.00	0.00	2.42	0.00	0.00	0.65	2.82	0.00	0.36	0.00	0.00	1.07	3.26	2.63	0.38	0.62	0.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.26
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	9.11	0.00	0.00	0.00	0.00	0.00	3.14	6.01	0.00	0.00	0.00	0.00	1.94	0.00	0.00	0.00	0.00	0.00	0.00	0.00
13	ER3a	ExonRegion	0	0.12	5.98	5.92	0.79	0.00	21.30	16.96	2.65	7.22	31.72	2.91	9.45	1.28	2.55	2.12	25.83	17.04	18.74	14.60	13.09	3.55	7.13	4.55	1.30	4.58	4.84	0.35	1.01	10.99
14	E3_Da	NovelBoundary	0	0.00	4.17	2.12	0.00	0.00	3.38	10.30	2.04	4.17	9.35	0.00	1.63	1.31	0.00	7.37	0.00	10.31	9.25	0.00	0.00	0.00	1.85	0.00	0.00	0.00	1.80	0.00	0.00	1.52
15	E3a_E4a	KnownJunction	0	0.00	4.85	8.17	9.27	0.00	22.60	25.80	2.09	3.11	46.82	0.00	18.01	1.56	1.09	0.00	17.29	33.72	18.49	0.00	8.02	4.05	6.86	7.54	2.81	7.08	13.73	0.00	2.20	19.61
16	I3	Intron	0	0.60	3.77	3.18	0.20	0.00	9.88	4.23	1.13	3.96	14.98	1.13	3.35	0.24	1.70	7.56	10.42	10.94	6.96	6.61	1.23	1.83	0.66	0.76	1.02	2.20	2.72	0.31	0.68	3.18
17	I3_AR1	ActiveIntronRegion	0	1.08	4.91	4.01	0.45	0.00	12.93	7.12	1.98	3.93	17.68	1.20	3.93	0.00	1.86	8.25	13.61	11.78	8.65	7.26	1.57	2.70	0.68	1.48	1.63	3.07	2.58	0.69	1.03	3.54
18	I3_SR1	SilentIntronRegion	0	0.22	2.87	2.52	0.00	0.00	7.47	1.93	0.46	4.00	12.85	1.08	2.88	0.42	1.57	7.03	7.90	10.28	5.62	6.11	0.97	1.15	0.63	0.18	0.54	1.51	2.85	0.00	0.41	2.89
19	E4_Aa	NovelBoundary	0	0.00	18.81	5.43	0.00	0.00	6.87	5.26	0.00	14.71	8.83	1.55	4.25	0.00	4.36	9.97	7.27	6.26	4.62	0.00	0.00	3.21	0.00	0.00	0.00	3.75	0.00	0.00	0.00	6.50
20	ER4a	ExonRegion	0	0.00	9.82	21.59	2.81	0.00	27.51	24.19	3.76	10.24	49.86	6.19	24.06	4.26	4.10	12.16	18.58	52.58	29.91	13.07	21.61	6.57	15.46	9.86	4.22	21.24	15.70	8.10	1.96	23.20
21	E4a_E5a	KnownJunction	0	0.00	13.48	31.32	0.00	0.00	38.67	42.34	4.48	20.80	73.90	14.27	31.60	2.77	5.65	33.88	34.04	64.76	19.26	0.00	10.67	5.70	11.86	9.21	0.00	15.87	30.00	0.00	6.38	15.88
22	E4a_E6a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	2.92	0.00	0.00	0.00	0.00	1.30	1.62	0.00	0.00	0.00	0.00	0.00	0.00	8.19	0.00	4.42	0.00	0.00	1.70	0.00	0.00	0.00	0.00
23	E4a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	ER5a	ExonRegion	0	0.80	10.02	36.92	0.00	0.00	27.70	38.48	4.31	16.63	79.16	10.99	24.79	3.11	9.94	8.88	37.78	44.63	33.60	18.93	15.59	8.56	15.61	12.18	6.52	23.11	23.10	1.89	1.10	20.93
25	E5_Da	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	1.84	0.00	0.00	1.40	1.60	0.00	0.00	0.00	0.00	9.97	0.00	0.00	9.25	0.00	6.70	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	E5a_E6a	KnownJunction	0	2.65	16.58	30.25	0.00	0.00	21.64	34.04	2.19	8.74	52.81	5.35	16.11	0.00	3.41	0.00	9.72	32.84	19.01	16.18	10.59	9.39	25.18	10.05	0.00	15.19	22.66	0.00	0.00	21.89
27	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	4.81	0.00	1.89	0.00	0.00	0.00	0.00	0.00	0.00	2.75	2.45	4.62	0.00	3.39	1.64	2.48	2.07	0.00	0.00	0.00	0.00	0.00	2.05
28	ER6a	ExonRegion	0	0.30	14.43	26.69	2.07	0.00	22.37	35.22	2.79	12.05	59.18	8.70	22.88	1.90	6.81	7.69	19.71	57.43	34.51	22.86	12.83	7.30	20.47	11.09	6.15	24.41	24.75	4.57	1.40	21.38
29	E6a_E7a	KnownJunction	0	0.00	9.40	27.16	10.78	0.00	26.09	63.45	2.39	13.06	80.81	25.37	33.92	3.98	5.21	8.97	41.08	62.22	66.14	32.37	11.08	3.33	20.76	13.10	5.98	31.79	34.63	0.00	2.25	37.14
30	ER7a	ExonRegion	0	1.10	9.12	29.85	11.45	0.00	26.40	41.98	1.25	11.35	66.44	12.69	23.45	2.05	8.54	9.62	36.89	43.80	32.81	25.33	21.75	6.89	21.31	13.90	2.56	22.98	29.59	2.98	1.96	22.30
31	E7a_E8a	KnownJunction	0	3.01	18.81	33.14	10.35	0.00	21.79	42.51	2.29	10.14	59.24	2.50	16.84	0.00	5.27	0.00	12.70	48.87	42.51	8.09	14.97	5.58	8.70	18.27	8.55	14.13	23.13	0.00	0.00	29.42
32	E7a_E11a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	5.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.69	0.00	2.51	0.00	1.89	0.00	0.00	0.00	1.45
33	E8_Aa	NovelBoundary	0	0.00	4.85	2.44	0.00	35.07	5.79	0.00	0.00	0.00	1.52	0.00	1.51	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.80	0.00	4.96	0.00	0.00	0.00	0.00	0.00	2.29	0.00
34	ER8a	ExonRegion	0	6.24	13.60	25.80	1.40	26.52	18.13	31.15	0.02	7.34	41.77	6.49	20.02	1.14	6.18	9.50	21.58	39.78	30.68	14.95	18.54	4.58	20.36	12.44	7.65	19.59	23.24	2.22	0.40	25.20
35	E8_Da	NovelBoundary	0	0.00	0.00	2.22	0.00	13.26	3.68	2.80	0.00	0.00	1.48	1.17	0.00	0.00	1.02	0.00	7.65	2.14	9.25	8.09	6.45	2.05	9.09	2.41	0.00	0.00	0.00	0.00	0.00	1.68
36	E8a_E9a	KnownJunction	0	7.90	25.59	30.45	0.00	30.65	23.94	25.40	0.00	15.10	35.75	9.17	25.24	1.34	6.12	0.00	28.08	39.08	47.01	8.09	31.26	0.00	29.95	12.95	5.80	20.76	18.54	4.32	3.86	26.81
37	E8a_E11a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.44	0.00	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
38	I8	Intron	0	0.49	1.84	1.21	0.27	1.48	3.76	1.53	0.00	1.13	4.61	0.54	2.16	0.10	1.07	2.72	2.55	4.82	2.89	2.55	1.14	0.81	1.30	0.07	0.57	1.58	0.96	0.21	0.12	0.82
39	I8_AR1	ActiveIntronRegion	0	0.00	3.65	0.58	0.00	5.54	2.95	2.18	0.00	3.39	2.18	0.00	3.29	0.00	3.25	0.00	0.94	2.14	2.18	3.49	0.00	0.00	5.42	0.00	0.80	1.62	1.19	2.08	1.23	2.28
40	I8_AR2	ActiveIntronRegion	0	0.65	1.94	2.02	0.00	0.00	3.73	0.61	0.00	1.86	6.31	1.40	1.64	0.78	0.96	6.59	5.03	5.70	2.91	0.96	2.06	0.43	2.09	0.00	1.29	0.43	1.42	0.00	0.00	1.01
41	I8_SR2	SilentIntronRegion	0	0.21	2.57	1.00	0.71	1.95	6.02	2.20	0.00	1.11	7.77	0.83	2.89	0.00	1.12	2.38	2.87	8.18	4.70	4.14	1.77	1.28	1.26	0.18	0.64	2.72	0.78	0.00	0.00	0.67
42	E9_Aa	NovelBoundary	0	2.30	0.00	0.00	0.00	0.00	5.79	5.84	0.00	4.48	5.63	0.00	0.00	0.00	0.00	0.00	0.00	5.20	4.62	0.00	0.00	0.00	0.00	1.92	3.05	5.53	0.00	0.00	0.00	0.00
43	ER9a	ExonRegion	0	7.64	30.66	37.76	11.27	62.53	62.52	42.04	5.54	25.69	94.76	39.08	27.65	6.22	13.61	10.33	52.35	57.80	37.84	40.26	25.97	15.97	54.48	21.64	16.07	48.91	35.72	8.57	4.31	33.20
44	E9a_E10a	KnownJunction	0	7.90	33.74	22.40	0.00	24.17	52.68	34.44	2.04	17.48	71.14	13.76	15.27	4.36	11.74	8.37	29.61	38.00	28.51	16.18	19.52	10.67	26.40	13.74	8.91	15.65	20.17	12.03	0.00	31.63
45	E9a_E11a	KnownJunction	0	3.01	3.78	10.26	0.00	7.07	15.81	10.99	5.08	5.69	19.93	26.54	4.37	7.55	3.88	15.95	14.15	24.08	13.87	8.09	3.64	11.43	7.00	4.68	7.48	10.61	16.01	24.30	2.29	19.08
46	E10_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	7.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
47	ER10a	ExonRegion	0	10.31	27.81	34.57	0.00	51.17	43.75	34.19	2.77	10.67	68.57	20.65	26.81	4.38	13.16	12.90	40.11	37.84	31.07	21.44	16.35	12.75	26.19	13.83	14.93	26.07	31.91	10.34	2.04	33.26
48	E10_Da	NovelBoundary	0	5.31	0.00	0.00	0.00	0.00	0.00	2.29	0.00	0.00	3.87	0.00	0.00	0.00	0.00	17.94	0.00	5.02	23.37	0.00	0.00	2.01	4.57	0.00	0.00	5.30	0.00	0.00	0.00	0.00
49	E10a_E11a	KnownJunction	0	5.90	41.20	44.55	0.00	70.89	69.18	58.87	4.53	13.49	85.28	16.20	34.22	3.79	13.16	31.69	47.35	35.83	18.49	40.46	22.58	18.33	25.72	15.86	17.59	49.17	36.05	0.00	3.77	38.69
50	I10	Intron	0	1.05	0.00	0.41	0.00	4.77	2.35	0.98	0.45	0.82	2.11	2.61	0.00	0.00	0.00	3.81	0.00	1.09	0.94	1.56	0.00	0.70	1.32	0.44	0.00	0.70	0.38	0.45	0.40	0.49
51	I10_SR1	SilentIntronRegion	0	1.05	0.00	0.41	0.00	4.79	2.36	0.99	0.45	0.83	2.12	2.63	0.00	0.00	0.00	3.82	0.00	1.10	0.94	1.57	0.00	0.70	1.33	0.44	0.00	0.70	0.39	0.45	0.40	0.49
52	E11_Aa	NovelBoundary	0	0.00	0.00	3.09	0.00	12.67	0.00	0.00	0.00	0.00	1.84	0.00	0.00	0.00	0.00	8.37	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.04	0.00
53	ER11a	ExonRegion	0	6.95	54.60	14.91	10.38	35.01	69.18	50.15	1.99	38.47	66.97	24.78	26.50	4.71	14.38	29.79	52.39	46.72	31.30	41.74	20.88	14.33	22.05	10.36	16.71	21.60	13.19	7.13	2.96	30.94
54	E11_Da	KnownBoundary	0	0.00	65.64	1.97	9.49	5.60	23.52	27.01	0.00	15.23	15.02	8.92	5.72	0.00	1.37	17.94	26.39	15.40	13.87	32.37	0.00	5.46	9.38	0.00	7.60	7.35	1.80	0.00	0.00	15.32
55	ER11b	ExonRegion	0	1.00	22.10	2.96	4.11	8.49	29.02	20.27	0.78	22.72	30.10	13.91	12.72	2.69	7.54	19.42	19.64	23.83	12.58	15.68	12.36	6.97	7.05	3.22	10.94	8.70	5.87	2.31	0.31	12.72
56	IG30_AR1	ActiveIntergenicRegion	0	4.32	3.05	5.64	1.61	2.19	6.02	0.66	0.41	1.01	5.03	1.74	3.73	1.46	6.30	1.55	5.85	2.85	15.14	2.87	2.44	2.88	5.27	3.00	0.24	1.93	4.77	2.67	2.56	3.00