Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C17orf65	Gene	0	42.51	35.71	50.53	30.15	11.44	39.28	15.67	29.22	47.41	45.41	29.58	46.20	29.16	57.39	109.67	79.51	115.85	57.26	46.27	30.68	58.83	29.06	35.20	54.34	62.56	74.44	33.45	70.76	91.53
2	303061	Transcript	0	32.21	14.27	26.43	20.55	7.37	23.32	11.07	19.82	24.33	31.80	22.66	32.05	18.25	33.21	41.12	57.47	64.29	34.13	21.89	22.35	28.64	19.72	25.23	28.63	35.12	51.60	23.11	55.40	66.15
3	IG45_AR1	ActiveIntergenicRegion	0	0.00	1.09	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.82	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	ER1a	ExonRegion	0	48.26	9.85	25.10	73.13	31.55	30.86	20.04	27.51	31.77	36.23	21.18	32.24	23.69	31.09	45.63	110.29	88.63	50.33	25.07	20.69	38.48	29.50	35.37	13.97	34.43	65.23	29.10	72.47	99.91
5	E1_Da	NovelBoundary	0	2.60	0.00	0.00	0.00	7.37	3.72	2.40	2.19	6.33	0.00	0.00	1.39	0.00	1.09	0.00	0.00	3.98	0.00	8.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.77	0.00
6	E1a_E2a	KnownJunction	0	20.59	0.00	6.80	0.00	0.00	6.98	5.09	10.00	6.58	3.04	15.60	4.79	4.59	8.75	0.00	10.17	24.38	4.62	0.00	4.05	2.05	0.00	6.80	5.62	11.93	9.57	2.48	12.49	15.75
7	E1a_E3a	NovelJunction	0	2.71	4.85	8.05	19.20	19.01	8.67	0.00	7.07	7.00	2.04	3.16	7.74	1.18	10.79	27.11	0.00	13.91	4.62	0.00	0.00	3.69	12.74	0.00	0.00	15.65	17.59	2.24	8.18	16.61
8	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.21	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.44	2.10	0.00	0.00	1.25
9	I1	Intron	0	2.78	2.26	0.70	1.66	3.39	2.35	1.40	1.79	2.75	2.14	1.54	1.28	0.78	2.36	5.58	1.23	4.90	2.27	3.25	2.26	2.77	0.25	0.33	2.49	1.06	0.58	0.00	2.11	0.96
10	I1_AR1	ActiveIntronRegion	0	5.10	2.02	0.00	4.27	2.91	3.27	4.80	4.02	3.45	3.15	0.94	1.47	0.00	3.14	8.59	1.34	10.07	3.06	5.07	0.00	2.83	0.72	0.00	1.71	1.70	0.94	0.00	5.82	2.66
11	I1_SR1	SilentIntronRegion	0	2.07	2.34	0.91	0.87	3.54	2.08	0.37	1.11	2.54	1.83	1.73	1.23	1.02	2.13	4.67	1.20	3.34	2.04	2.70	2.95	2.76	0.11	0.44	2.73	0.86	0.47	0.00	0.98	0.45
12	E2_Aa	NovelBoundary	0	15.22	4.36	11.21	32.14	0.00	13.81	2.06	16.87	21.65	25.53	6.77	9.43	10.09	13.03	15.15	19.58	17.26	4.62	0.00	3.89	21.98	8.46	2.02	12.92	11.29	12.36	8.55	7.23	9.61
13	ER2a	ExonRegion	0	45.18	12.92	9.01	8.43	1.52	28.26	15.67	25.49	28.37	28.51	14.98	28.27	20.31	35.49	39.24	85.54	53.38	39.71	25.86	34.19	27.73	26.26	26.27	28.20	33.90	49.66	11.19	40.01	56.49
14	E2_Da	NovelBoundary	0	8.85	0.00	5.53	9.27	5.45	5.29	2.40	9.70	0.00	3.67	3.20	3.89	1.97	9.04	24.12	9.94	19.76	13.87	0.00	0.00	5.58	2.48	9.16	11.72	11.10	0.00	0.00	0.00	2.64
15	E2a_E3a	KnownJunction	0	21.53	12.31	18.76	8.84	0.00	11.78	7.61	17.27	12.58	44.66	36.06	44.46	7.96	33.21	7.77	54.08	73.61	51.24	24.28	29.85	20.06	22.12	28.12	34.33	47.32	58.62	38.52	63.26	73.98
16	I2	Intron	0	7.09	8.03	3.18	0.72	11.25	4.82	2.02	2.40	4.72	5.64	3.22	4.14	0.19	6.79	7.66	5.90	17.05	8.72	7.36	4.62	9.86	1.26	1.63	4.96	5.87	3.94	1.47	2.13	9.71
17	I2_SR1	SilentIntronRegion	0	6.85	6.00	3.15	0.00	6.15	4.43	0.63	1.10	3.96	3.67	2.65	3.70	0.25	5.13	1.76	3.22	14.70	3.84	5.87	4.34	7.80	0.95	0.70	6.37	4.80	4.49	0.58	2.08	7.47
18	I2_AR1	ActiveIntronRegion	0	7.54	9.41	3.35	1.10	14.30	5.25	2.80	3.15	5.33	6.88	3.65	4.56	0.18	7.94	10.91	7.49	19.03	11.53	8.45	4.98	11.35	1.48	2.16	4.50	6.68	3.86	1.98	2.25	11.28
19	E3_Aa	NovelBoundary	0	10.15	0.00	8.92	0.00	34.04	14.31	6.35	26.82	20.71	15.54	13.67	15.12	14.23	16.48	51.03	16.83	49.43	4.62	0.00	10.01	15.96	2.04	4.43	18.48	11.29	20.94	14.46	27.23	20.01
20	ER3a	ExonRegion	0	33.44	14.72	27.18	15.67	7.62	23.93	11.02	18.58	28.79	38.54	24.66	29.67	20.72	36.74	53.66	50.20	46.93	21.67	18.61	33.50	24.82	21.39	27.44	33.83	32.71	66.25	34.95	78.09	59.44
21	E3_Da	NovelBoundary	0	57.27	79.31	5.16	50.69	45.83	32.80	13.90	13.54	63.13	43.30	7.18	24.28	23.85	20.67	103.85	54.62	42.57	55.74	24.28	20.01	44.56	11.23	16.45	50.07	23.11	58.23	9.19	29.70	31.33
22	E3a_E4a	KnownJunction	1	14.16	9.11	40.59	8.41	0.00	19.64	2.52	9.60	10.81	23.61	14.30	35.06	19.62	24.59	17.34	14.00	35.77	10.02	8.09	3.14	22.26	9.09	16.20	23.39	16.48	33.99	9.84	48.53	61.80
23	Ix	Intron	0	43.95	11.39	9.23	9.42	8.99	14.64	7.95	15.49	22.99	15.56	7.35	16.77	4.42	25.60	62.21	51.88	76.14	47.48	11.76	13.56	19.69	15.17	10.70	22.90	39.27	15.49	7.94	13.93	20.76
24	Ix_AR1	ActiveIntronRegion	0	44.65	8.40	8.92	3.29	7.14	14.52	6.83	15.23	20.99	12.61	9.46	13.02	4.26	27.25	54.10	44.93	65.75	47.75	16.81	12.94	19.95	9.52	13.25	21.96	35.64	9.38	7.00	11.38	19.01
25	Ix_SR1	SilentIntronRegion	0	43.93	12.97	9.45	12.58	9.98	14.81	8.57	15.73	24.18	17.16	6.35	18.79	4.53	24.97	66.77	55.76	81.95	47.69	9.32	13.98	19.70	18.12	9.49	23.55	41.38	18.68	8.47	15.31	21.79
26	E4_Aa	NovelBoundary	0	36.81	8.53	18.39	0.00	29.18	11.86	5.78	17.87	14.34	16.22	9.05	18.28	1.27	21.34	92.48	60.28	120.60	27.74	0.00	7.11	14.56	2.33	9.21	41.45	24.47	13.69	4.67	12.40	24.86
27	ER4a	ExonRegion	0	42.29	40.99	57.58	29.35	10.88	41.78	15.56	30.27	51.40	48.04	31.84	49.84	30.85	62.61	124.22	78.02	127.36	61.31	51.32	31.03	65.11	29.69	36.40	61.09	69.03	77.85	35.72	72.98	95.69