Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CCL3L1	Gene	0	71.94	13.09	20.34	11.96	5.47	14.89	16.65	7.50	31.67	47.79	4.22	3.51	1.11	8.01	23.23	1.42	12.29	11.53	3.37	2.53	26.91	28.86	1.15	0.28	5.04	10.79	0.66	2.17	48.81
2	425833	Transcript	0	4.34	2.49	1.80	0.00	0.00	3.29	4.05	0.16	3.22	6.83	0.62	0.82	0.00	0.73	1.37	0.00	3.51	1.12	0.00	0.10	4.67	1.02	0.08	0.00	0.82	2.90	0.37	0.32	6.79
3	421963	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	438338	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	492788	Transcript	0	57.36	6.02	22.02	3.49	4.07	25.62	15.18	2.85	22.59	50.24	4.02	4.61	1.58	9.00	48.70	0.78	15.48	6.60	4.43	2.12	26.92	14.94	1.35	0.02	3.66	6.66	0.00	2.65	23.00
6	422211	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	498676	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	394483	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.22	0.00	0.00	0.00	0.00	0.00	0.00	0.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
9	394486	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.19
10	394484	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
11	378354	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	ER1a	ExonRegion	0	6.79	0.00	2.93	0.00	0.00	4.28	3.58	0.00	5.49	6.02	0.00	0.00	0.00	1.51	0.00	0.00	2.28	0.00	0.00	0.00	1.27	0.00	0.00	0.00	0.00	8.64	1.63	1.27	10.07
13	E1_Ae	KnownBoundary	0	40.88	0.00	8.25	0.00	0.00	13.16	10.93	2.24	17.14	22.69	0.00	0.00	0.00	4.32	8.17	0.00	10.31	0.00	0.00	0.00	5.98	2.48	0.00	0.00	0.00	16.99	2.53	2.29	21.66
14	ER1b	ExonRegion	0	31.96	2.09	10.71	6.65	1.36	9.25	6.96	0.84	10.62	17.85	1.19	1.01	0.35	3.63	2.04	0.92	5.10	0.99	0.41	0.00	7.26	10.98	0.00	0.00	2.99	14.00	1.83	2.37	24.16
15	ER1c	ExonRegion	0	122.18	16.42	34.78	29.25	9.96	16.50	16.13	7.36	23.59	37.54	5.95	4.95	1.30	9.07	11.20	5.06	7.01	10.92	4.53	0.00	29.95	93.74	0.00	0.00	14.29	26.72	1.83	6.52	69.79
16	ER1d	ExonRegion	0	170.76	17.52	37.03	29.25	9.96	19.70	22.17	9.82	31.46	51.98	5.95	4.95	1.30	9.07	11.20	7.59	8.01	14.56	4.53	0.00	47.55	135.21	0.00	0.00	14.29	27.77	1.83	6.52	78.29
17	ER1e	ExonRegion	0	116.68	13.50	44.18	28.95	8.21	17.26	17.15	8.75	36.98	47.79	4.58	4.28	0.39	5.94	14.75	4.68	5.83	12.48	5.96	0.00	34.59	106.31	0.00	0.00	6.75	26.69	0.25	5.22	77.25
18	E1_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E1a_E1g	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
20	E1a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER1f	ExonRegion	0	40.65	4.70	21.25	3.30	1.10	15.65	10.07	3.33	14.47	41.41	2.76	4.26	1.10	4.63	15.33	0.80	8.75	3.29	5.60	2.12	15.54	7.74	2.77	1.64	4.07	4.77	0.70	1.79	20.60
22	E1_Db	KnownBoundary	0	72.20	8.92	75.69	52.41	26.82	24.82	23.29	15.73	40.17	44.26	3.86	3.31	3.34	15.11	48.63	0.00	14.27	9.25	0.00	7.11	19.85	25.18	1.97	19.02	3.86	2.23	0.00	4.67	11.75
23	E1b_E1g	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	E1b_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
25	ER1g	ExonRegion	1	72.88	12.04	45.63	21.94	4.98	13.75	28.56	2.45	34.45	52.94	0.00	0.00	1.30	3.78	52.27	5.06	11.85	6.82	4.53	4.68	13.31	16.22	5.42	10.76	4.29	0.79	1.83	0.00	12.75
26	ER1h	ExonRegion	0	57.36	6.02	22.02	3.49	4.07	25.62	15.18	2.85	22.59	50.24	4.02	4.61	1.58	9.00	48.70	0.78	15.48	6.60	4.43	2.12	26.92	14.94	1.35	0.02	3.66	6.66	0.00	2.65	23.00
27	E1_Ag	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
28	ER1i	ExonRegion	0	105.18	23.05	12.79	13.60	10.92	12.12	25.90	9.19	60.63	55.15	6.43	7.92	4.24	14.22	23.63	4.33	22.13	23.22	3.69	3.82	38.07	30.03	1.19	1.55	10.27	36.63	2.01	4.15	112.92
29	E1c_E3a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER2a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	ER3a	ExonRegion	0	106.10	13.55	18.09	0.00	0.62	4.47	30.99	17.03	18.54	68.94	22.02	6.18	2.60	12.13	21.70	0.00	28.30	18.42	0.00	2.81	24.07	17.35	1.81	0.00	8.93	44.99	3.66	5.50	104.52
32	ER3b	ExonRegion	0	93.00	21.33	39.42	1.66	9.50	14.66	18.54	13.11	23.64	67.47	7.81	2.72	1.68	11.03	10.53	0.37	28.41	16.16	0.00	2.36	32.71	28.22	0.29	0.00	3.26	21.06	1.05	4.04	77.08
33	E3_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
34	ER3c	ExonRegion	0	115.12	18.84	20.99	23.80	8.86	15.60	20.21	11.31	50.08	69.27	4.95	1.55	1.55	13.01	28.00	1.72	10.27	18.64	6.13	3.47	36.63	34.24	1.30	0.00	9.54	3.18	1.07	1.25	81.19
35	E3_Db	NovelBoundary	0	3.01	22.40	5.76	0.00	7.37	6.98	8.75	0.00	9.29	34.27	11.29	4.94	0.00	8.51	32.89	0.00	22.60	5.01	8.09	0.00	12.19	2.29	0.00	2.81	5.19	0.00	0.00	0.00	1.68
36	Ix_AR1	ActiveIntronRegion	0	0.25	1.84	4.03	0.00	0.56	1.38	2.07	0.32	6.14	0.99	0.00	0.35	0.00	1.04	3.99	0.57	6.67	1.10	0.00	1.89	1.63	0.00	0.00	0.25	0.00	0.72	0.00	0.00	0.00
37	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.69	0.00	0.00	6.87	0.00	0.00	0.00	0.00	0.00	0.00	41.26	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
38	ER4a	ExonRegion	0	10.62	12.45	2.72	0.00	0.00	12.19	14.67	0.82	8.38	25.25	3.11	4.10	0.00	1.22	6.87	0.00	15.28	5.60	0.00	0.51	20.68	5.08	0.39	0.00	2.65	5.88	0.24	0.31	17.16
39	E4a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
40	Ix_SR3	SilentIntronRegion	0	8.57	2.74	6.30	4.35	0.00	4.65	2.70	0.89	4.83	9.82	0.58	0.52	0.00	1.69	16.32	0.00	16.82	3.90	1.16	0.00	3.29	1.53	0.00	0.26	1.21	1.53	0.22	0.20	5.52
41	Ix_AR1	ActiveIntronRegion	0	4.09	0.00	0.00	0.00	0.00	0.00	2.02	4.85	2.86	0.00	0.00	0.00	1.30	0.49	1.53	0.00	0.00	2.23	1.23	2.56	1.04	2.95	0.82	0.00	2.73	0.00	0.00	0.00	0.00
42	E5_Aa	NovelBoundary	0	9.97	0.00	21.00	0.00	0.00	8.82	4.81	0.00	8.13	26.24	0.00	0.00	0.00	4.25	0.00	0.00	9.16	0.00	0.00	0.00	6.66	11.47	2.51	0.00	5.42	9.57	0.00	0.00	27.10
43	ER5a	ExonRegion	0	97.34	9.92	28.89	38.61	7.74	10.79	15.32	9.16	29.14	30.46	6.41	6.64	0.61	5.83	13.71	0.00	7.57	10.48	2.02	3.16	23.53	74.64	1.15	0.00	4.98	28.97	0.00	4.55	60.21
44	E5a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
45	E5a_E9c	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
46	ER6a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.19
47	ER7a	ExonRegion	0	49.54	5.43	3.34	0.25	5.80	6.60	10.41	5.40	35.18	34.09	1.23	2.11	0.58	3.84	4.48	1.10	6.06	11.23	1.97	1.69	15.24	26.21	1.60	0.00	0.63	16.13	0.81	1.93	49.37
48	E7a_E9a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
49	ER8a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.22	0.00	0.00	0.00	0.00	0.00	0.00	0.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
50	E9_Ac	NovelBoundary	0	1002.81	1614.81	58.92	437.64	41.85	562.01	470.02	294.17	558.13	246.06	1185.54	303.43	2099.85	161.37	208.49	134.48	70.86	33.52	0.00	34.07	120.17	1125.34	333.17	134.64	82.48	85.70	97.56	78.23	145.03
51	ER9a	ExonRegion	0	55.46	6.98	8.84	7.31	4.98	3.78	7.56	2.76	17.41	40.97	7.14	4.95	0.00	6.24	5.60	0.00	25.17	15.35	4.53	4.22	12.66	17.58	1.81	0.00	1.43	16.70	1.83	5.91	76.34
52	ER9b	ExonRegion	0	56.80	7.80	8.14	7.31	4.98	5.84	6.30	4.37	16.85	40.79	6.84	4.95	0.00	6.69	9.10	0.00	24.17	15.69	4.53	5.62	11.23	17.80	1.81	0.00	1.43	20.43	1.83	7.13	71.47
53	ER9c	ExonRegion	0	66.74	20.69	20.10	4.04	9.67	7.26	9.75	7.20	24.20	51.78	3.87	2.90	0.76	8.12	20.31	3.78	18.26	12.06	2.84	5.08	17.54	17.76	0.27	1.64	4.78	14.73	1.23	3.53	47.56
54	E9_Da	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
55	ER9d	ExonRegion	1	53.83	19.32	16.58	8.56	3.19	9.39	20.55	12.03	35.63	42.61	3.55	2.13	0.27	6.65	14.51	1.20	11.48	12.97	0.39	3.20	27.51	17.63	0.88	0.00	3.45	3.88	0.78	0.20	35.45
56	ER9e	ExonRegion	0	4.29	0.00	3.37	0.00	0.00	0.00	2.02	0.00	2.25	2.89	0.00	0.00	0.00	0.91	0.00	0.00	0.00	0.00	0.00	0.00	1.43	0.00	0.00	0.00	1.43	0.00	0.00	0.00	6.71