Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	C17orf49	Gene	0	595.23	445.22	1077.19	616.32	1132.86	500.33	933.06	487.40	1010.05	501.51	482.61	224.76	523.84	341.23	732.55	427.11	266.93	616.51	269.08	429.87	263.42	1179.06	564.01	480.68	680.32	682.44	430.57	235.15	523.82
2	455303	Transcript	0	43.89	38.30	32.41	0.00	38.17	6.48	23.69	30.36	44.89	22.01	5.88	6.02	31.14	11.45	101.85	37.71	9.70	41.61	16.18	88.24	15.00	100.44	15.56	30.45	10.68	48.15	8.20	4.00	27.93
3	439424	Transcript	0	457.27	261.56	162.16	126.75	161.21	357.63	496.19	309.50	1268.49	292.28	220.81	132.68	331.03	217.81	485.77	265.56	146.88	424.70	133.50	265.02	204.20	767.77	296.12	311.21	535.25	398.94	263.17	94.66	311.22
4	293804	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	IG25	Intergenic	0	2.95	2.55	1.15	8.23	16.83	1.26	1.85	1.27	0.52	1.99	0.55	1.27	1.94	1.25	13.75	8.23	1.37	7.15	0.73	1.27	0.99	4.97	2.91	3.95	1.97	4.69	0.42	0.75	0.62
6	IG25_AR1	ActiveIntergenicRegion	0	2.98	2.57	1.16	8.31	16.98	1.27	1.87	1.28	0.52	2.01	0.55	1.28	1.95	1.26	13.87	8.31	1.38	7.22	0.74	1.28	1.00	5.01	2.93	3.99	1.99	4.74	0.42	0.76	0.62
7	ER1a	ExonRegion	0	72.48	87.48	169.68	480.24	561.84	80.89	192.17	64.72	73.49	70.55	67.21	35.87	65.72	39.42	190.51	155.75	28.18	248.57	65.50	82.45	37.12	204.59	163.38	42.87	63.19	187.19	101.64	72.43	123.89
8	E1a_E2a	KnownJunction	0	144.46	157.93	636.75	331.52	618.08	157.84	295.63	105.90	219.56	176.48	129.77	85.90	156.42	92.28	119.79	97.69	146.33	176.46	48.55	134.14	95.14	262.14	260.19	67.59	125.17	603.72	239.29	259.39	466.78
9	E2_Aa	NovelBoundary	0	23.36	9.02	13.20	9.49	46.72	5.41	14.70	4.23	5.48	8.39	4.14	1.51	12.93	1.99	16.34	20.81	4.97	0.00	0.00	0.00	5.86	10.40	33.59	2.69	9.24	9.23	5.91	0.00	4.52
10	ER2a	ExonRegion	0	292.96	196.47	368.54	369.71	566.69	224.45	366.02	241.57	331.78	181.34	143.03	100.25	267.20	120.19	307.15	242.71	116.77	285.90	93.09	207.34	119.11	621.03	243.96	205.94	190.90	340.65	137.52	114.38	232.49
11	E2_Da	NovelBoundary	0	16.22	12.80	2.17	10.57	0.00	5.64	2.17	0.00	0.00	8.51	0.00	4.31	1.78	2.26	26.51	7.19	7.63	9.25	8.09	6.95	5.46	6.42	9.21	3.05	3.33	5.49	2.53	4.58	1.45
12	E2a_E3a	KnownJunction	0	491.23	298.51	337.97	256.24	256.28	301.38	484.21	505.52	594.95	211.39	207.36	139.94	308.76	203.33	407.01	294.60	181.83	31.34	0.00	348.25	150.73	1203.81	182.86	445.51	425.91	257.83	106.60	102.49	243.57
13	E2a_E4a	KnownJunction	0	43.89	38.30	32.41	0.00	38.17	6.48	23.69	30.36	44.89	22.01	5.88	6.02	31.14	11.45	101.85	37.71	9.70	41.61	16.18	88.24	15.00	100.44	15.56	30.45	10.68	48.15	8.20	4.00	27.93
14	I2	Intron	0	12.30	6.34	9.77	4.49	43.81	10.32	7.36	3.46	6.79	5.27	1.74	2.70	3.18	7.79	13.90	15.25	8.25	14.43	7.33	4.32	5.36	6.58	4.34	14.59	8.20	7.21	2.29	2.38	5.17
15	I2_AR1	ActiveIntronRegion	0	12.35	6.37	9.81	4.50	43.98	10.37	7.39	3.47	6.82	5.29	1.74	2.71	3.19	7.82	13.96	15.31	8.29	14.49	7.36	4.34	5.38	6.61	4.36	14.65	8.23	7.23	2.30	2.39	5.19
16	E3_Aa	NovelBoundary	0	11.38	0.00	11.04	0.00	32.42	12.78	5.84	2.49	7.80	3.52	6.14	3.52	1.40	3.88	17.74	16.83	9.14	5.39	0.00	0.00	4.01	2.38	7.09	30.45	14.70	11.80	0.00	0.00	10.96
17	ER3a	ExonRegion	0	630.39	483.24	462.77	338.75	524.97	662.04	1136.96	533.19	810.09	588.01	521.73	271.08	562.56	342.05	773.32	576.19	305.41	747.69	298.08	445.60	323.65	1221.66	639.38	508.87	727.80	815.92	373.60	237.23	669.72
18	E3_Da	NovelBoundary	0	7.67	3.97	12.76	0.00	11.79	10.36	12.47	2.54	9.71	9.31	1.46	4.01	5.60	7.75	25.31	25.09	16.93	19.26	0.00	12.40	6.90	9.14	18.12	35.65	9.96	5.92	9.99	2.11	8.88
19	E3a_E4a	KnownJunction	0	662.52	524.21	685.51	530.60	922.55	493.68	911.32	619.73	665.39	613.24	668.72	280.15	592.37	379.08	771.37	440.40	409.76	645.75	396.31	479.16	261.48	1211.84	818.58	616.16	786.50	758.25	838.45	301.67	772.09
20	Ix	Intron	0	13.89	11.40	17.41	6.09	5.19	17.68	8.35	4.11	15.90	10.74	8.86	2.88	1.72	11.33	34.49	22.95	19.35	16.75	5.43	4.36	8.79	3.45	4.03	28.57	13.52	5.18	9.34	3.29	4.55
21	Ix_AR1	ActiveIntronRegion	0	13.95	11.45	17.48	6.12	5.21	17.75	8.39	4.13	15.97	10.78	8.89	2.89	1.73	11.38	34.63	23.04	19.43	16.82	5.45	4.37	8.82	3.46	4.05	28.69	13.58	5.20	9.38	3.30	4.57
22	E4_Aa	NovelBoundary	0	13.27	8.73	19.66	0.00	0.00	8.71	2.23	2.44	14.10	3.91	2.94	3.01	1.34	3.04	19.73	6.96	13.64	4.62	0.00	0.00	7.18	2.48	4.38	23.99	14.70	0.00	0.00	1.84	4.69
23	ER4a	ExonRegion	0	835.62	697.31	2347.47	1122.93	2361.33	751.97	1253.00	783.40	1193.58	826.78	791.23	314.98	757.40	539.45	996.70	618.61	422.49	870.66	452.94	608.39	364.14	1573.34	763.92	762.27	1044.55	989.53	670.12	339.30	763.79
24	E4_Da	NovelBoundary	0	0.00	0.00	1.87	0.00	0.00	7.25	0.00	2.54	6.03	3.64	1.46	1.33	0.00	2.22	0.00	9.87	4.12	9.25	8.09	0.00	2.01	0.00	3.94	19.56	4.43	0.00	0.00	0.00	0.00
25	E4a_E5a	KnownJunction	0	779.37	687.38	1540.91	880.02	1862.33	620.25	1086.17	606.30	1174.31	701.52	617.32	312.71	630.93	491.83	1053.60	559.89	368.59	879.62	566.25	651.42	299.95	1632.86	657.78	730.83	859.31	721.69	675.49	297.13	612.17
26	E4a_E6a	NovelJunction	1	61.23	16.77	38.54	47.02	60.86	46.58	78.73	90.13	177.60	29.88	33.91	21.48	79.26	28.76	145.70	59.21	15.67	111.73	64.74	68.72	54.63	144.49	66.78	78.42	63.50	38.79	19.18	0.00	26.34
27	E4a_E6b	NovelJunction	0	38.28	14.54	11.01	17.47	14.74	25.90	18.25	22.79	47.17	11.02	4.24	6.39	13.31	10.95	16.74	35.88	4.93	19.14	16.18	28.45	10.31	33.89	25.31	16.39	24.55	11.97	6.46	0.00	8.91
28	Ix	Intron	0	1.46	11.32	4.19	0.00	4.45	3.44	2.29	2.93	3.83	3.94	1.08	1.82	0.30	2.37	10.25	6.06	5.10	7.02	4.36	0.63	2.60	1.64	1.24	6.86	2.28	1.07	1.67	0.37	1.07
29	Ix_AR1	ActiveIntronRegion	0	1.48	11.42	4.23	0.00	4.49	3.47	2.32	2.96	3.87	3.98	1.09	1.84	0.30	2.39	10.34	6.11	5.14	7.08	4.40	0.63	2.62	1.66	1.25	6.92	2.29	1.08	1.68	0.37	1.08
30	E5_Aa	NovelBoundary	0	2.18	4.85	2.14	10.57	0.00	3.45	2.92	0.00	8.89	5.83	3.13	0.00	1.97	6.51	0.00	7.04	6.66	9.25	24.28	0.00	2.05	2.48	0.00	29.01	1.55	1.63	0.00	3.77	0.00
31	ER5a	ExonRegion	0	946.70	769.11	876.28	557.85	1021.26	757.13	1754.43	697.47	1913.76	850.08	873.21	407.68	944.36	611.21	1384.58	649.60	457.56	1013.38	464.22	632.29	385.19	1670.71	1041.30	718.77	1169.29	1071.46	759.14	432.33	901.41
32	E5_Da	NovelBoundary	0	2.95	0.00	5.13	0.00	0.00	3.84	2.92	4.43	9.41	7.31	3.10	3.04	0.00	3.50	34.28	10.94	6.05	9.25	0.00	6.78	0.00	1.90	5.02	21.95	3.41	1.97	0.00	1.75	3.37
33	E5a_E6a	KnownJunction	0	364.53	207.76	128.19	121.87	126.15	290.48	367.89	199.61	1156.62	222.46	161.72	105.30	265.07	162.05	412.59	218.33	120.47	380.54	104.98	156.22	164.77	550.15	228.42	254.57	420.15	309.41	215.34	72.61	259.78
34	E5a_E6b	KnownJunction	0	838.83	484.75	315.32	321.17	314.49	898.76	1154.42	706.97	2427.89	574.18	426.75	249.81	670.61	451.31	1033.67	609.24	325.48	856.12	291.10	741.89	604.38	1561.49	608.43	652.77	1227.03	695.55	373.08	178.56	578.96
35	Ix	Intron	0	0.00	0.00	0.00	0.00	0.00	2.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.82	0.00	0.00	0.00	0.00	1.71	2.03	0.00	0.00	0.00	3.08	0.00
36	Ix_AR1	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	2.64	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.89	0.00	0.00	0.00	0.00	1.77	2.11	0.00	0.00	0.00	3.13	0.00
37	E6_Aa	NovelBoundary	0	12.98	4.85	7.40	8.63	5.89	3.22	7.32	0.00	6.94	10.75	4.21	5.81	4.11	3.32	36.08	10.33	8.96	0.00	0.00	7.11	3.33	2.14	11.33	40.20	9.09	13.17	0.00	4.00	8.22
38	E6_Ab	NovelBoundary	0	5.84	0.00	3.84	0.00	0.00	0.00	4.98	6.27	5.85	5.11	0.00	0.00	2.80	7.31	0.00	3.52	11.32	4.62	0.00	0.00	2.05	2.04	6.89	21.89	10.34	0.00	0.00	0.00	1.88
39	ER6a	ExonRegion	0	550.02	315.35	196.14	131.63	196.27	424.77	624.48	419.40	1380.36	362.10	279.91	160.05	396.98	273.57	558.94	312.80	173.30	468.87	162.02	373.82	243.63	985.38	363.82	367.85	650.35	488.46	310.99	116.71	362.65
40	ER6b	ExonRegion	0	625.79	379.19	1179.16	540.94	1012.45	451.87	855.03	461.30	1281.78	414.04	409.93	203.82	483.40	313.22	678.13	337.43	231.77	517.83	207.61	460.46	278.63	1351.61	507.81	479.62	672.69	613.58	411.62	202.58	438.97