Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	FAM64A	Gene	0	6.78	11.56	12.33	0.48	73.49	5.55	6.17	0.74	12.84	8.26	2.44	1.16	1.99	7.84	3.84	2.56	3.47	4.19	4.52	1.99	5.33	12.08	4.99	21.07	5.15	5.66	4.37	2.19	6.51
2	250056	Transcript	0	0.00	9.60	3.69	0.00	27.12	2.99	5.61	0.00	3.20	1.92	3.23	0.00	1.82	2.95	0.00	0.00	2.18	0.00	0.00	0.00	0.00	6.66	0.00	5.32	1.93	1.89	0.00	0.00	5.02
3	308855	Transcript	0	8.28	7.29	8.23	0.00	49.00	4.32	5.11	0.00	12.01	6.04	7.45	1.06	0.50	6.82	4.57	2.79	5.21	6.40	10.89	6.76	6.26	13.83	5.71	21.52	5.97	14.78	1.59	1.14	2.18
4	ER1a	ExonRegion	0	1.83	9.24	3.55	0.00	119.04	5.61	6.76	0.00	6.51	4.12	0.00	0.05	0.49	2.53	11.78	3.43	2.92	6.42	1.89	0.00	0.74	2.74	0.23	6.95	0.60	6.94	1.53	0.34	5.45
5	E1a_E2a	KnownJunction	1	5.78	13.38	6.78	0.00	299.02	8.94	20.20	0.00	9.59	11.74	0.00	1.69	3.34	5.83	0.00	3.75	6.51	0.00	8.09	0.00	2.05	9.43	0.00	20.88	1.93	19.61	4.97	0.00	18.29
6	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.85	0.00	0.00	0.00	0.00	0.00
7	ER2a	ExonRegion	0	5.82	6.24	9.91	0.00	76.43	5.31	4.39	0.00	10.17	3.88	0.37	1.57	2.19	5.07	5.26	2.08	2.12	3.87	2.20	0.73	1.65	7.22	3.64	14.78	2.61	5.24	3.18	1.72	8.64
8	E2a_E3a	KnownJunction	0	2.83	7.95	29.87	0.00	247.88	1.61	8.70	2.24	4.54	1.96	1.17	3.13	1.37	2.97	0.00	9.87	1.33	0.00	0.00	0.00	0.00	15.51	6.60	8.97	1.52	8.24	0.00	6.78	1.85
9	ER3a	ExonRegion	0	7.53	5.92	13.75	0.00	117.32	2.08	3.02	0.01	5.51	6.04	1.31	0.26	0.54	7.26	5.56	2.23	1.89	2.07	4.22	2.66	2.22	13.57	5.03	13.52	5.17	6.66	1.50	1.02	6.12
10	E3a_E4a	KnownJunction	0	8.02	14.25	18.96	0.00	88.86	5.22	8.07	0.00	15.17	14.62	1.61	1.54	1.24	10.35	0.00	0.00	5.09	0.00	8.09	4.13	4.01	27.81	7.24	28.89	1.55	15.79	11.08	2.25	6.01
11	I3_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	15.06	0.00	0.00	0.00	0.00	0.00
12	I3_SR2	SilentIntronRegion	0	0.00	0.00	0.32	0.00	0.00	0.00	0.00	0.00	0.43	0.00	0.00	0.00	0.00	0.17	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.34	0.00	0.00	0.00	0.00	0.26
13	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.86	0.00	0.00	0.00	0.00	2.71
14	ER4a	ExonRegion	0	5.02	13.58	17.87	0.00	67.15	7.12	5.98	3.87	12.92	10.00	3.95	0.52	1.26	7.45	1.17	0.98	2.23	1.08	6.32	3.78	3.24	20.64	3.69	24.51	8.43	7.56	8.99	1.51	10.64
15	E4a_E5a	KnownJunction	0	8.38	7.85	11.39	0.00	31.83	5.52	5.32	0.00	13.46	5.55	14.90	1.27	0.00	8.29	9.97	7.42	5.00	9.25	15.96	14.14	9.47	14.29	6.94	21.47	12.58	20.17	0.00	2.25	3.47
16	E4a_E6a	KnownJunction	0	0.00	9.60	3.69	0.00	27.12	2.99	5.61	0.00	3.20	1.92	3.23	0.00	1.82	2.95	0.00	0.00	2.18	0.00	0.00	0.00	0.00	6.66	0.00	5.32	1.93	1.89	0.00	0.00	5.02
17	I4_AR1	ActiveIntronRegion	0	0.35	0.00	0.00	0.00	4.07	0.36	0.33	0.00	0.72	0.47	0.72	0.00	0.00	0.96	0.00	0.83	0.58	0.31	1.04	0.57	0.47	0.59	0.30	2.46	0.47	0.00	0.30	0.00	0.22
18	I4_AR2	ActiveIntronRegion	0	0.52	1.55	1.61	0.00	17.41	1.12	0.97	0.00	0.55	0.69	0.08	0.30	0.78	1.20	0.00	1.72	0.21	0.00	0.00	0.94	0.00	0.00	0.00	0.00	1.03	0.00	0.00	0.00	0.00
19	E5_Aa	NovelBoundary	0	2.65	7.56	0.00	0.00	14.15	0.00	0.00	0.00	4.66	0.00	1.33	0.00	0.00	0.95	0.00	0.00	1.40	0.00	0.00	0.00	5.70	0.00	2.12	5.80	0.00	1.63	0.00	0.00	2.97
20	ER5a	ExonRegion	0	8.67	4.82	8.45	0.00	62.10	3.64	7.08	0.00	12.93	7.22	6.24	0.30	0.00	7.32	3.73	0.96	3.74	5.34	16.70	3.00	5.26	15.38	5.51	24.24	5.34	16.69	0.00	1.16	3.07
21	E5_Da	NovelBoundary	0	2.77	0.00	0.00	0.00	14.74	1.84	0.00	0.00	2.86	1.56	2.97	0.00	3.22	1.06	0.00	0.00	1.40	0.00	0.00	0.00	3.81	0.00	0.00	4.96	12.65	0.00	0.00	0.00	0.00
22	E5a_E6a	KnownJunction	0	7.79	9.21	4.86	0.00	53.05	3.80	2.92	0.00	9.62	5.35	1.20	1.63	1.50	4.85	0.00	0.00	6.89	4.62	0.00	3.14	4.05	11.81	4.68	18.84	0.00	7.47	4.77	0.00	0.00
23	I5	Intron	0	0.38	0.57	2.07	0.00	13.79	0.97	0.00	0.00	1.19	1.02	0.63	0.65	0.46	1.59	0.00	1.75	0.53	0.34	0.56	0.00	3.52	2.55	0.32	2.28	5.05	0.00	0.00	0.00	0.24
24	I5_AR1	ActiveIntronRegion	0	0.38	0.57	2.08	0.00	13.89	0.98	0.00	0.00	1.20	1.03	0.63	0.66	0.46	1.61	0.00	1.76	0.53	0.34	0.57	0.00	3.55	2.56	0.32	2.29	5.08	0.00	0.00	0.00	0.24
25	ER6a	ExonRegion	0	7.38	16.76	12.95	1.04	52.09	7.04	8.27	1.07	17.60	11.36	3.61	1.56	2.83	9.85	2.27	3.19	4.96	5.44	4.88	2.12	8.96	12.98	6.08	27.51	6.18	4.37	5.98	3.20	5.39
26	IG15	Intergenic	0	0.00	0.00	0.43	0.00	0.00	0.00	0.00	0.00	0.29	0.37	0.00	0.00	0.00	0.23	0.00	0.00	0.00	0.00	0.00	0.70	0.00	0.00	0.00	2.19	0.00	0.00	0.00	0.00	0.00
27	IG15_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.43	0.00	0.00	0.00	0.00	0.00	0.29	0.37	0.00	0.00	0.00	0.23	0.00	0.00	0.00	0.00	0.00	0.71	0.00	0.00	0.00	2.22	0.00	0.00	0.00	0.00	0.00