Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	DERL2	Gene	0	103.88	93.99	61.27	126.57	91.49	84.83	125.29	62.79	80.80	91.15	96.47	27.38	67.47	72.02	135.59	77.44	60.81	67.77	49.63	114.55	53.35	68.89	47.87	76.13	79.37	43.78	85.08	38.06	46.53
2	158771	Transcript	0	368.48	288.49	180.96	355.93	296.95	256.05	424.27	206.18	230.14	268.95	292.60	76.58	198.77	198.43	377.87	230.89	169.43	218.52	127.69	383.13	157.38	246.45	147.05	226.08	241.30	147.41	263.42	106.62	141.45
3	IG8	Intergenic	0	14.36	6.55	9.57	42.10	23.91	9.32	16.55	7.35	4.81	10.33	2.15	3.39	5.33	8.21	22.09	15.20	14.96	19.13	10.83	19.92	6.23	8.15	6.94	5.02	5.60	14.92	7.86	10.07	3.98
4	IG8_AR1	ActiveIntergenicRegion	0	14.38	6.56	9.59	42.17	23.95	9.33	16.57	7.36	4.82	10.34	2.15	3.39	5.33	8.22	22.12	15.22	14.98	19.16	10.85	19.95	6.24	8.16	6.95	5.03	5.61	14.94	7.87	10.08	3.99
5	ER1a	ExonRegion	0	178.89	111.11	236.99	786.28	356.26	153.17	269.19	98.27	88.84	129.68	129.80	45.83	91.97	85.72	150.88	180.58	131.92	150.31	64.03	170.55	113.15	160.65	96.97	61.30	82.12	96.18	161.63	63.13	72.61
6	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	0.00	0.00	0.00	3.47	0.00	8.37	0.00	0.90	0.00	0.00	0.00	4.09	0.00	0.00	0.00	1.44	0.00	0.00	5.75	0.00
7	E1a_E2a	KnownJunction	0	15.69	30.64	49.28	54.57	46.42	13.47	32.33	8.96	32.43	33.47	9.21	10.54	35.19	16.31	26.71	21.04	23.41	9.25	8.09	28.61	10.95	13.66	11.23	18.24	12.39	15.19	64.76	10.24	28.06
8	I1	Intron	0	7.19	3.55	1.90	2.57	2.34	7.57	3.74	1.54	3.96	4.75	1.85	1.92	2.01	3.55	12.77	5.25	5.27	9.94	1.91	4.03	4.18	1.51	0.54	4.38	2.99	2.73	0.55	2.34	1.80
9	I1_AR1	ActiveIntronRegion	0	9.18	3.89	2.00	3.95	1.93	5.16	4.78	2.20	2.53	4.19	2.11	1.56	3.09	3.51	8.97	6.29	4.99	10.85	1.79	3.63	2.66	2.32	0.83	3.06	2.30	3.76	0.84	2.85	2.29
10	I1_SR1	SilentIntronRegion	0	3.49	2.94	1.73	0.00	3.12	12.15	1.82	0.32	6.67	5.85	1.38	2.61	0.00	3.65	19.99	3.31	5.84	8.28	2.15	4.81	7.08	0.00	0.00	6.88	4.31	0.80	0.00	1.41	0.91
11	E2_Aa	NovelBoundary	0	8.20	0.00	2.52	0.00	0.00	8.36	10.47	0.00	4.23	0.00	0.00	3.73	0.00	1.26	27.71	10.48	7.20	14.38	8.09	7.77	7.14	0.00	0.00	5.62	5.57	0.00	0.00	0.00	0.00
12	ER2a	ExonRegion	0	216.56	116.61	40.99	130.85	143.26	116.53	141.90	111.27	117.08	90.67	92.38	29.18	81.09	107.99	127.71	77.42	52.53	96.31	46.70	277.53	92.87	206.11	23.12	113.55	106.49	51.86	100.43	34.65	50.27
13	E2_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	1.80	0.00	0.00	3.81	0.00	0.00	1.36	0.00	0.00	0.00	10.40	1.08	4.62	0.00	0.00	5.37	0.00	0.00	0.00	0.00	0.00	0.00	4.54	0.00
14	E2a_E3a	KnownJunction	0	689.60	292.31	52.27	94.69	126.00	312.89	285.22	335.82	285.61	159.38	124.74	44.19	160.97	232.09	317.52	234.24	116.69	162.98	89.02	839.48	236.45	611.12	28.17	301.71	242.73	124.15	78.42	55.54	107.29
15	E2a_E6a	NovelJunction	0	18.93	13.86	1.00	0.00	0.00	7.60	8.75	23.14	12.55	3.95	0.00	0.00	4.90	0.95	16.14	3.75	1.91	0.00	0.00	7.44	3.29	16.97	4.97	0.00	1.86	0.00	0.00	0.00	1.45
16	I2	Intron	0	1.57	1.81	0.14	0.00	0.63	2.14	0.87	0.40	1.14	1.31	0.93	0.32	0.08	1.40	2.74	2.01	1.29	3.37	1.93	0.50	1.66	0.00	0.00	1.02	0.80	0.48	0.47	0.70	0.43
17	I2_SR1	SilentIntronRegion	0	1.58	1.81	0.14	0.00	0.63	2.14	0.87	0.40	1.14	1.31	0.93	0.32	0.08	1.41	2.75	2.01	1.29	3.38	1.94	0.50	1.67	0.00	0.00	1.03	0.81	0.48	0.48	0.71	0.43
18	E3_Aa	NovelBoundary	0	0.00	4.36	0.00	0.00	0.00	0.00	2.52	0.00	1.19	1.56	2.85	0.00	0.00	0.00	8.37	3.29	1.37	0.00	16.18	0.00	2.05	0.00	0.00	5.20	0.00	0.00	0.00	0.00	0.00
19	ER3a	ExonRegion	0	506.93	398.76	58.76	157.12	152.00	503.39	816.41	249.62	316.98	492.97	484.68	98.43	266.46	268.17	499.59	477.79	251.03	411.51	195.34	614.63	309.62	288.85	231.58	272.35	367.94	223.11	325.77	127.87	206.82
20	E3_Da	NovelBoundary	0	0.00	3.88	1.20	0.00	7.22	3.15	2.40	0.00	0.00	6.07	1.17	0.00	0.00	4.99	26.71	0.00	3.44	0.00	0.00	0.00	5.62	0.00	0.00	5.92	0.00	3.86	0.00	3.73	0.00
21	E3a_E4a	KnownJunction	0	294.99	263.51	76.21	193.69	201.75	241.29	559.85	115.85	226.11	410.20	599.82	104.82	282.65	237.85	330.47	216.11	307.86	223.21	145.66	334.68	166.30	129.03	291.21	244.71	272.96	243.97	566.25	176.94	223.01
22	E3a_E5a	NovelJunction	1	13.45	4.27	8.00	0.00	6.63	22.48	34.61	9.65	4.14	5.39	31.54	7.62	14.23	7.13	16.34	9.26	22.67	0.00	0.00	20.76	5.37	0.00	7.09	5.74	17.96	2.02	29.32	0.00	14.00
23	I3	Intron	0	2.34	1.91	1.75	3.92	1.33	2.88	2.11	0.50	3.29	1.71	2.11	0.45	0.26	2.76	4.23	4.58	3.67	2.63	0.73	2.31	2.08	0.00	0.25	2.84	2.15	1.65	0.17	1.71	0.00
24	I3_AR1	ActiveIntronRegion	0	0.00	5.94	1.37	8.81	3.00	1.67	0.00	0.00	0.00	1.84	0.00	0.00	0.00	1.48	0.00	1.86	0.11	2.56	1.96	0.47	0.88	0.00	0.00	1.32	2.29	0.00	0.00	0.00	0.00
25	I3_AR2	ActiveIntronRegion	0	2.07	0.74	1.45	0.00	4.66	3.06	2.73	0.00	0.72	1.44	0.00	0.68	0.00	2.98	0.00	6.04	1.84	0.00	0.00	5.62	0.28	0.00	0.00	2.57	0.88	0.00	0.00	0.00	0.00
26	I3_SR1	SilentIntronRegion	0	3.22	5.87	0.72	0.00	4.98	2.45	4.03	0.00	2.25	1.44	0.00	1.24	0.00	2.72	0.80	2.17	2.00	0.00	0.00	4.42	2.75	0.00	0.00	4.30	1.33	2.69	0.00	0.00	0.00
27	I3_AR3	ActiveIntronRegion	0	2.76	1.81	1.34	4.80	0.93	3.85	3.60	0.00	1.49	1.01	4.03	0.71	0.00	4.78	10.41	4.21	4.75	3.07	0.53	1.94	1.85	0.00	0.60	0.98	4.06	1.30	0.00	1.84	0.00
28	I3_AR4	ActiveIntronRegion	0	3.27	0.00	1.73	1.80	0.00	1.33	3.14	0.00	2.78	1.21	1.15	1.74	0.00	1.81	7.16	9.83	3.83	6.22	2.67	1.75	1.45	0.00	0.00	2.01	2.02	0.75	0.00	4.25	0.00
29	I3_AR5	ActiveIntronRegion	0	4.23	0.00	1.86	14.98	0.00	0.57	0.84	0.00	10.03	1.94	0.78	0.36	0.00	3.34	2.87	3.64	5.45	0.47	0.00	0.00	1.77	0.00	0.00	3.25	0.00	4.71	0.00	5.37	0.00
30	I3_SR2	SilentIntronRegion	0	2.22	1.70	2.06	2.52	1.29	2.88	1.54	0.97	4.47	2.12	1.78	0.22	0.51	1.94	1.69	4.67	3.63	2.40	0.56	2.77	2.55	0.00	0.16	4.09	1.38	2.01	0.32	1.48	0.00
31	E4_Aa	NovelBoundary	0	3.01	0.00	1.22	0.00	0.00	1.96	2.40	0.00	6.76	2.00	0.00	0.00	4.49	3.28	0.00	3.06	5.54	5.39	0.00	3.14	0.00	0.00	0.00	2.99	1.70	0.00	23.85	0.00	0.00
32	ER4a	ExonRegion	0	427.87	268.98	340.57	426.23	440.28	373.12	536.96	315.82	250.63	341.13	396.26	96.41	224.52	255.75	344.08	216.40	231.09	218.16	131.92	461.70	207.31	259.35	188.69	319.03	325.74	185.55	443.95	153.10	163.02
33	E4_Da	NovelBoundary	0	33.50	46.92	15.17	52.20	20.34	8.52	13.90	9.46	12.49	30.48	1.17	4.94	6.53	19.14	8.77	46.21	16.39	13.87	0.00	40.27	24.23	8.36	0.00	25.12	6.63	9.14	11.58	1.71	6.54
34	E4a_E5a	KnownJunction	0	318.88	287.75	563.48	985.71	789.03	332.61	587.14	199.66	222.15	334.54	367.91	80.93	194.28	215.83	437.71	237.76	140.95	172.48	104.98	420.11	154.26	185.28	157.75	243.27	222.58	111.62	259.92	106.98	111.02
35	I4	Intron	0	17.17	12.84	4.31	15.38	11.88	15.73	12.69	5.66	20.53	14.04	8.17	2.34	2.08	16.75	26.08	37.43	23.28	14.42	4.57	16.99	7.96	4.38	3.23	16.16	11.35	4.50	3.01	4.55	4.54
36	I4_AR1	ActiveIntronRegion	0	20.62	13.54	4.32	18.93	17.06	16.52	12.98	8.69	20.62	17.16	7.99	2.48	2.04	18.09	23.06	36.26	21.35	17.28	5.07	21.67	6.76	7.77	3.56	17.80	14.14	6.76	5.34	6.23	5.94
37	I4_AR2	ActiveIntronRegion	0	8.96	11.90	6.13	21.94	6.86	12.08	12.36	1.93	13.48	12.66	10.01	0.97	3.22	16.01	26.35	37.88	22.05	15.61	9.13	14.01	4.30	0.65	2.49	11.88	11.27	0.05	0.00	1.92	1.98
38	I4_AR3	ActiveIntronRegion	0	16.85	12.60	8.36	25.84	9.49	15.91	15.49	2.72	29.95	16.53	5.15	2.95	0.87	18.41	34.91	42.68	27.57	9.50	1.24	17.17	8.27	0.69	6.89	21.01	8.01	0.82	0.98	4.62	1.56
39	I4_SR1	SilentIntronRegion	0	15.08	12.32	2.58	3.29	5.69	16.92	12.12	2.78	20.91	9.01	9.62	2.44	2.49	15.45	30.08	40.29	27.76	11.77	3.50	10.77	11.95	0.97	1.48	14.09	8.18	3.44	0.50	2.61	4.15
40	E5_Aa	NovelBoundary	0	12.92	3.78	7.10	0.00	22.11	14.20	18.02	0.00	15.99	10.75	14.36	1.60	6.11	13.07	15.95	42.99	15.13	23.89	0.00	2.98	7.58	2.48	6.94	19.02	8.87	5.62	0.00	6.47	0.00
41	I4_AR4	ActiveIntronRegion	0	2.14	16.79	0.00	7.31	0.00	3.82	6.05	0.00	7.12	1.12	5.82	2.06	0.00	2.52	17.42	15.75	9.79	4.25	4.53	0.00	5.39	0.00	3.62	2.15	3.97	1.22	1.83	0.36	2.68
42	I4_SR2	SilentIntronRegion	0	0.21	3.94	0.00	7.31	0.00	0.00	2.82	0.00	2.02	0.00	2.38	0.37	0.00	0.54	7.28	10.63	2.50	0.00	4.07	0.00	0.86	0.00	2.53	1.72	2.86	0.00	0.37	0.00	1.07
43	ER5a	ExonRegion	0	510.54	352.02	268.37	710.67	545.86	389.67	572.93	318.80	291.56	396.13	380.87	101.72	255.81	273.76	501.40	308.30	208.57	272.69	176.97	483.05	194.71	317.35	197.42	352.99	386.26	188.13	287.49	148.16	186.97
44	E5_Da	NovelBoundary	0	8.73	3.68	0.00	8.84	0.00	7.98	0.00	9.26	15.26	18.49	3.16	1.42	0.00	7.98	0.00	10.40	16.61	9.25	0.00	3.14	0.00	0.00	0.00	5.74	4.89	0.00	0.00	2.25	0.00
45	E5a_E6a	KnownJunction	0	480.50	390.81	205.37	429.23	382.87	285.92	617.58	290.78	317.92	376.77	376.89	110.42	264.05	261.94	783.33	303.93	192.27	322.49	210.18	472.05	140.83	258.79	224.78	299.20	369.30	205.69	342.61	149.35	200.23
46	I5	Intron	0	3.16	5.92	1.76	3.02	1.03	15.35	6.81	2.33	14.40	6.39	2.01	1.56	0.82	5.14	8.15	7.17	12.90	7.10	2.69	3.48	3.01	0.00	0.00	4.99	2.71	2.65	0.00	0.69	2.53
47	I5_SR1	SilentIntronRegion	0	4.91	6.96	1.53	6.32	0.00	16.61	10.68	2.56	13.62	7.74	2.46	1.68	0.40	7.03	11.86	11.30	12.33	7.47	3.09	2.15	2.85	0.00	0.00	4.87	2.52	3.64	0.00	0.76	3.72
48	I5_AR1	ActiveIntronRegion	0	1.76	5.13	2.02	0.29	1.95	14.75	3.69	2.20	15.52	5.43	1.68	1.51	1.20	3.68	5.21	3.84	13.77	6.95	2.44	4.72	3.23	0.00	0.00	5.24	2.96	1.88	0.00	0.65	1.59
49	E6_Aa	NovelBoundary	0	11.15	20.17	1.07	0.00	0.00	3.99	8.01	0.00	9.90	12.78	1.61	0.00	0.00	7.25	16.94	12.70	8.87	18.49	0.00	4.13	1.80	0.00	0.00	2.27	5.34	5.79	0.00	2.29	1.49
50	ER6a	ExonRegion	0	566.35	477.25	226.73	326.26	288.55	288.17	518.20	309.81	372.92	378.93	403.28	133.24	333.58	291.14	712.69	343.18	244.72	337.85	203.31	412.80	190.32	353.91	232.59	364.89	379.89	237.96	382.47	159.03	242.77
51	E6_Da	NovelBoundary	0	0.00	3.97	1.12	0.00	0.00	4.72	2.17	0.00	5.60	13.94	3.23	0.00	1.24	2.02	9.97	0.00	4.25	19.14	0.00	4.13	0.00	0.00	2.51	2.45	3.71	0.00	0.00	2.11	0.00
52	E6a_E7a	KnownJunction	0	536.24	702.99	202.23	279.11	349.42	275.52	519.17	296.46	418.45	302.31	382.56	123.46	352.93	288.08	593.37	343.40	265.05	429.21	250.87	404.15	199.83	387.97	202.47	305.00	327.02	212.00	362.64	178.15	220.63
53	I6	Intron	0	3.97	4.31	0.86	1.43	1.67	4.86	1.44	0.47	3.18	3.70	2.98	1.16	1.28	4.54	5.66	4.31	9.27	7.55	2.46	3.50	2.11	0.82	0.36	4.05	1.79	2.33	0.63	1.90	1.68
54	I6_SR1	SilentIntronRegion	0	2.27	2.28	0.79	0.42	1.15	2.83	1.31	0.33	2.54	2.12	3.29	1.63	1.04	3.70	4.60	3.24	6.06	4.61	3.01	2.51	1.43	0.96	0.21	2.15	2.02	2.13	0.00	2.40	0.86
55	I6_SR2	SilentIntronRegion	0	5.84	6.40	0.97	2.49	2.26	6.69	1.59	0.59	3.82	5.33	2.78	0.75	1.55	5.39	6.98	5.44	12.64	10.48	1.85	4.42	2.89	0.73	0.52	6.00	1.62	2.43	1.27	1.45	2.40
56	I6_AR2	ActiveIntronRegion	0	0.00	2.82	0.00	0.00	0.00	8.38	0.86	1.10	3.08	2.27	0.96	0.00	0.49	4.06	0.00	3.01	5.25	6.89	3.88	4.89	0.00	0.00	0.00	2.25	0.71	4.45	0.00	1.36	3.36
57	E7_Aa	NovelBoundary	0	15.34	3.49	1.40	0.00	0.00	6.29	0.00	0.00	9.47	5.47	6.77	0.00	0.00	4.21	0.00	23.26	6.12	0.00	0.00	7.28	0.00	0.00	0.00	5.92	3.64	4.16	0.00	6.34	0.00
58	ER7a	ExonRegion	0	47.18	57.69	31.16	52.63	38.61	42.84	58.64	29.24	51.15	50.21	55.42	16.41	40.58	44.98	86.84	41.42	36.56	34.29	32.84	61.40	29.30	31.73	25.65	42.75	41.45	20.92	48.15	22.93	26.09