Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TUBB3	Gene	0	39.62	7.98	16.69	4.72	121.55	6.41	2.12	16.70	4.20	3.42	0.93	10.70	20.82	25.28	12.46	14.75	23.08	50.92	20.29	640.21	9.95	129.56	253.67	21.96	28.78	136.68	15.31	552.05	95.07
2	304984	Transcript	0	2.13	1.45	2.12	0.38	1.64	1.21	0.42	0.42	2.18	0.71	0.14	0.98	2.22	4.77	9.50	7.96	16.75	7.79	6.68	3.05	1.90	2.97	4.87	8.25	7.73	5.19	3.60	8.04	3.53
3	315491	Transcript	0	12.80	0.00	6.50	1.02	73.51	1.93	1.90	9.89	0.00	1.61	0.78	3.22	7.71	6.11	0.00	1.70	4.02	16.12	3.17	193.98	2.92	45.21	116.78	7.42	8.51	43.79	3.00	193.04	59.46
4	IG3	Intergenic	0	3.04	2.97	1.60	1.10	2.41	2.25	0.37	0.11	1.82	2.49	0.33	1.06	1.62	5.02	11.42	5.38	14.17	9.85	5.22	4.60	3.25	2.78	3.12	4.84	7.27	9.73	3.16	6.63	3.45
5	IG3_AR1	ActiveIntergenicRegion	0	2.36	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.14	0.00	0.00	0.00	0.00	0.00	3.29	2.91	0.27	0.00	0.00	3.00	0.00	0.00	0.00	2.14	1.73	0.00	0.00	0.00
6	IG3_SR2	SilentIntergenicRegion	0	2.14	1.99	0.41	0.00	4.19	0.00	0.00	0.00	1.45	1.86	0.00	0.20	0.00	0.57	8.40	6.46	4.75	9.41	6.91	1.70	8.37	0.00	2.00	0.00	3.69	9.47	0.00	3.65	1.17
7	IG3_AR2	ActiveIntergenicRegion	0	3.10	3.05	1.66	1.15	2.41	2.35	0.39	0.12	1.86	2.56	0.34	1.11	1.69	5.22	11.72	5.44	14.66	10.06	5.28	4.76	3.18	2.90	3.21	5.06	7.49	9.93	3.30	6.84	3.57
8	ER1a	ExonRegion	0	7.02	1.71	6.19	1.54	3.15	2.95	0.97	1.68	4.35	2.33	0.58	3.51	2.80	10.59	17.04	14.64	38.30	18.32	6.18	7.38	3.68	6.29	11.36	12.44	19.66	12.66	7.47	19.72	10.63
9	E1_Da	NovelBoundary	0	2.95	0.00	6.23	0.00	0.00	3.53	0.00	2.54	2.59	2.04	0.00	1.33	0.00	11.54	15.75	0.00	22.35	18.49	0.00	3.56	4.09	9.67	6.60	24.05	8.41	6.35	2.24	11.10	10.99
10	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.50	1.20	9.97	0.00	9.14	0.00	16.18	0.00	0.00	0.00	0.00	5.56	0.00	0.00	0.00	5.30	0.00
11	I1	Intron	0	2.88	2.70	3.09	0.00	4.10	2.54	0.68	0.93	4.04	1.70	0.20	0.93	2.06	8.12	15.88	9.16	13.52	14.65	3.22	1.26	3.11	5.14	8.79	12.27	12.23	7.65	11.06	6.84	6.63
12	I1_AR1	ActiveIntronRegion	0	2.90	2.72	3.11	0.00	4.12	2.55	0.68	0.93	4.06	1.71	0.20	0.94	2.08	8.18	15.99	9.22	13.61	14.74	3.24	1.27	3.13	5.18	8.85	12.35	12.31	7.70	11.13	6.88	6.68
13	E2_Aa	NovelBoundary	0	0.00	7.66	4.86	0.00	19.01	5.64	0.00	0.00	8.22	0.00	0.00	1.14	0.00	8.93	35.08	10.79	27.10	23.89	0.00	0.00	3.53	2.19	14.82	7.96	10.23	6.57	9.74	0.00	5.18
14	ER2a	ExonRegion	0	1.49	4.11	2.30	0.00	3.40	1.90	0.69	0.00	4.36	0.50	0.00	0.43	4.60	7.29	10.97	10.77	19.56	12.83	4.37	4.80	3.93	5.60	8.11	15.01	11.25	8.12	6.94	7.14	3.48
15	E2_Da	NovelBoundary	0	7.85	9.60	8.77	0.00	0.00	7.94	2.29	0.00	1.83	6.11	0.00	2.80	0.00	8.31	59.40	7.50	25.82	14.64	16.18	12.07	3.05	0.00	2.41	18.78	9.66	12.45	14.66	8.54	15.52
16	E2a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
17	I2_AR1	ActiveIntronRegion	0	2.00	2.95	1.04	0.00	1.01	1.70	0.42	0.38	2.32	0.30	0.25	0.38	0.27	2.34	7.98	4.10	6.78	10.34	3.96	5.94	2.36	3.72	2.55	11.55	7.37	3.89	1.13	1.68	2.62
18	I2_AR2	ActiveIntronRegion	0	1.77	0.00	0.00	0.00	1.12	0.00	0.00	0.00	0.00	0.00	0.00	0.62	0.00	0.41	0.00	1.01	0.35	1.16	0.00	2.04	0.00	3.56	0.00	0.00	0.00	2.40	0.00	6.68	0.34
19	I2_SR2	SilentIntronRegion	0	0.52	0.00	0.02	0.00	0.00	0.17	0.00	0.00	0.00	0.00	0.14	0.54	0.00	0.33	0.00	0.13	0.91	0.94	0.00	1.34	0.00	2.04	0.44	0.00	0.35	1.53	0.00	1.10	0.00
20	ER3a	ExonRegion	0	15.86	0.00	4.50	2.03	109.73	3.86	0.87	4.94	0.00	1.61	0.36	3.98	6.92	4.18	0.00	3.40	2.79	18.36	6.34	213.22	2.70	60.72	159.79	6.11	7.09	60.85	5.99	243.77	55.04
21	E3a_E4a	KnownJunction	0	9.73	0.00	8.50	0.00	37.28	0.00	2.92	14.83	0.00	1.60	1.20	2.47	8.50	8.04	0.00	0.00	5.24	13.87	0.00	174.74	3.13	29.71	73.78	8.73	9.93	26.74	0.00	142.30	63.88
22	I3_AR1	ActiveIntronRegion	0	1.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.78	0.00	1.60	0.00
23	ER4a	ExonRegion	0	55.61	2.17	5.35	4.96	38.34	6.10	2.55	17.30	0.00	2.85	0.60	5.58	12.25	18.98	4.78	6.29	7.89	38.91	9.76	702.75	7.63	140.51	143.68	18.65	18.57	51.43	1.60	195.84	52.17
24	E4_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	3.97	0.00	0.00	0.00	0.00	1.63	0.00	0.00	0.00	1.95
25	E4a_E5a	KnownJunction	0	55.03	7.37	4.39	10.78	45.83	16.80	2.46	13.79	0.00	5.43	1.23	7.83	31.21	34.50	0.00	29.99	7.00	115.59	24.28	1261.91	13.44	176.14	319.68	31.52	46.86	106.17	7.26	387.62	82.27
26	I4_AR1	ActiveIntronRegion	0	0.41	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.27	0.00	0.47	0.25	0.40	0.00	0.00	0.28	0.01	0.00	2.16	0.27	0.00	0.34	0.00	0.00	0.00	0.35	0.62	2.36
27	I4_SR1	SilentIntronRegion	0	0.00	0.00	0.00	0.00	3.32	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.42	0.00	0.00	0.00	1.27	0.00	1.65	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.22	2.97
28	I4_AR2	ActiveIntronRegion	0	0.00	0.58	0.00	0.00	1.22	0.00	0.00	0.00	0.56	0.00	0.00	0.31	0.00	0.23	0.00	0.00	0.00	0.00	1.60	1.87	0.00	0.90	0.45	0.54	0.00	0.79	0.00	2.85	0.00
29	E5_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
30	ER5a	ExonRegion	0	66.91	10.95	12.20	6.46	117.27	12.27	4.23	32.51	0.56	9.35	2.06	12.27	27.63	36.14	4.64	21.34	11.88	75.90	29.07	1181.14	15.90	181.90	480.56	38.41	37.74	195.11	23.12	767.47	152.35
31	E5_Da	NovelBoundary	0	8.20	3.49	2.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.15	0.00	0.00	0.00	0.00	0.00	3.31	0.00	7.44	0.00	0.00	0.00	0.00	0.00	6.69	1.65
32	E5a_E6a	KnownJunction	0	68.72	19.10	30.79	19.41	303.29	9.90	8.01	26.67	4.39	8.67	5.66	12.44	29.97	29.91	0.00	24.48	12.90	50.86	16.18	1335.10	22.26	211.58	426.45	37.32	41.64	198.95	41.60	864.98	142.88
33	I5	Intron	0	0.88	2.08	0.27	0.00	2.80	0.00	0.00	0.75	0.09	0.00	0.10	0.30	0.00	0.48	0.38	0.41	0.37	0.79	0.78	10.41	0.12	0.30	0.44	0.18	1.05	0.26	0.30	6.41	0.82
34	I5_SR1	SilentIntronRegion	0	0.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.61	0.00	0.00	0.00	2.07	0.00	0.33	0.00	8.15	0.00
35	I5_AR2	ActiveIntronRegion	0	1.09	1.93	0.22	0.00	6.06	0.00	0.00	1.00	0.00	0.00	0.26	0.41	0.00	0.93	0.00	0.55	0.80	1.28	0.71	12.44	0.31	0.80	0.80	0.00	1.89	0.52	0.00	10.21	1.48
36	I5_SR2	SilentIntronRegion	0	0.37	3.55	0.95	0.00	2.69	0.00	0.00	0.53	0.45	0.00	0.00	0.56	0.00	0.40	1.87	1.00	0.35	0.26	1.29	16.40	0.00	0.00	0.00	0.00	1.16	0.19	0.00	4.88	1.33
37	I5_AR3	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.12	0.00	0.00	1.84	0.00	0.00	0.00	0.57	0.00	0.82	0.00	0.00	0.00	1.60	0.00	11.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.16	0.03
38	E6_Aa	NovelBoundary	0	2.60	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.08	0.00	0.00	0.00	0.00	0.00	10.25	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.84	1.62
39	ER6a	ExonRegion	0	66.00	14.01	28.39	7.63	225.01	9.17	3.02	29.15	5.26	4.29	1.29	17.97	37.03	39.81	12.32	16.88	17.68	80.87	33.76	1155.35	15.60	232.43	451.08	30.34	39.95	248.67	23.34	1031.78	167.59
40	IG4_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00