Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ST3GAL2	Gene	0	53.80	58.47	141.22	88.39	28.79	73.49	20.23	43.09	24.76	124.10	246.27	118.05	184.58	173.28	79.14	82.16	62.11	403.05	50.45	95.44	48.54	68.04	131.35	77.30	180.01	157.51	71.20	109.25	77.14
2	342907	Transcript	0	7.74	16.65	12.74	19.48	4.34	18.56	5.09	2.17	9.19	22.58	36.71	13.70	32.75	32.38	8.70	15.82	6.68	83.14	14.94	15.99	9.36	3.95	20.62	16.00	32.91	35.51	15.13	26.18	16.74
3	393640	Transcript	0	5.74	3.19	2.44	0.68	0.45	2.69	0.09	2.56	2.73	5.34	4.12	4.38	4.18	1.83	12.79	3.44	4.80	16.53	0.89	3.88	3.29	0.67	0.99	1.60	7.33	4.76	2.28	5.16	2.10
4	ER1a	ExonRegion	0	4.73	1.41	6.53	10.50	5.34	5.73	2.56	3.25	0.56	13.33	11.26	7.62	12.92	10.81	1.56	18.26	2.98	75.85	4.78	11.24	3.77	1.60	12.48	3.52	8.30	27.13	4.87	17.36	8.68
5	E1a_E2b	KnownJunction	0	7.90	9.60	16.22	36.67	0.00	19.18	2.92	0.00	8.89	30.64	29.26	13.55	35.12	51.49	9.97	21.65	4.41	111.86	8.09	24.48	5.54	2.48	24.53	4.85	10.84	43.69	6.86	33.20	27.37
6	I1	Intron	0	4.37	3.63	2.41	2.09	1.60	3.56	1.17	2.18	3.49	10.76	9.57	5.66	7.61	3.38	13.73	2.29	6.59	15.42	2.34	3.19	3.23	1.55	2.74	3.61	12.17	7.98	2.80	4.86	3.11
7	I1_SR1	SilentIntronRegion	0	2.78	2.80	2.05	1.73	0.88	2.35	0.77	1.71	2.51	8.34	6.27	3.50	4.62	1.99	8.54	1.24	5.21	11.19	2.04	1.90	2.82	0.90	1.61	1.73	7.19	6.02	2.04	3.62	2.24
8	I1_AR1	ActiveIntronRegion	0	4.75	1.71	0.89	0.95	3.52	0.55	0.27	1.20	3.13	6.91	4.49	6.53	5.48	2.00	7.72	1.03	5.63	8.94	1.69	3.93	0.92	1.43	2.32	0.90	12.77	7.31	0.49	4.47	1.15
9	I1_SR2	SilentIntronRegion	0	4.25	2.35	1.52	1.05	2.34	2.56	0.52	1.63	3.29	9.95	7.68	4.37	6.04	3.25	10.77	2.72	4.80	12.06	1.65	3.22	1.79	1.09	2.12	2.29	10.65	5.88	0.18	4.41	2.97
10	I1_AR2	ActiveIntronRegion	0	3.68	2.28	2.63	1.56	3.54	1.46	0.86	2.44	4.90	10.66	11.87	4.38	10.02	2.58	10.15	3.93	5.77	21.24	0.00	3.81	1.53	1.53	2.53	1.57	10.25	10.14	1.79	4.64	4.51
11	I1_SR3	SilentIntronRegion	0	3.03	4.18	2.05	2.92	3.07	3.63	1.55	1.42	3.96	9.51	7.58	4.23	8.37	2.80	17.65	1.56	7.24	12.93	1.76	2.95	2.52	1.62	1.42	2.74	11.91	6.92	2.02	2.87	4.28
12	I1_AR3	ActiveIntronRegion	0	8.13	5.51	4.12	3.85	1.13	3.73	1.70	3.23	3.47	12.01	14.01	7.39	11.26	5.86	20.32	3.97	8.43	18.53	2.35	2.90	3.86	1.88	2.55	5.00	17.12	9.87	3.33	5.95	5.15
13	I1_SR4	SilentIntronRegion	0	2.63	3.30	0.92	1.48	0.00	3.37	0.42	3.00	3.33	9.04	7.40	7.79	7.08	3.64	7.85	4.68	4.94	16.93	2.25	3.69	2.04	0.57	2.09	1.78	9.29	4.63	0.87	5.87	2.44
14	I1_AR5	ActiveIntronRegion	0	7.66	2.62	2.25	1.75	1.19	5.45	0.99	2.58	3.46	12.26	10.57	9.68	7.89	4.23	11.34	3.09	10.13	18.59	0.49	3.28	3.00	1.87	3.71	3.14	13.37	6.66	2.46	6.86	2.36
15	I1_AR6	ActiveIntronRegion	0	4.36	1.81	3.37	0.00	2.75	6.83	1.11	2.16	9.07	12.40	8.58	9.17	4.66	2.06	11.97	4.28	11.68	19.39	4.06	0.00	1.43	1.62	0.69	1.26	7.34	15.93	0.00	6.35	4.44
16	I1_SR5	SilentIntronRegion	0	11.41	3.14	2.56	0.00	4.25	4.52	1.21	2.03	4.46	9.32	7.62	7.41	8.34	3.36	10.20	1.24	7.75	17.90	0.37	1.54	3.34	0.00	2.42	4.23	5.51	7.32	3.09	5.13	1.28
17	I1_AR7	ActiveIntronRegion	0	7.62	4.33	4.17	3.03	1.55	4.26	2.22	3.45	4.23	19.07	15.27	11.41	9.75	5.15	17.13	2.61	9.63	20.58	3.83	5.52	4.00	2.19	2.95	7.70	20.99	11.32	5.50	8.76	2.81
18	I1_SR6	SilentIntronRegion	0	6.82	1.55	3.77	0.72	0.73	3.93	1.82	3.86	4.37	10.57	9.09	6.99	10.63	4.22	15.57	2.11	8.39	16.74	1.92	5.27	2.88	2.29	2.44	2.56	16.30	13.65	3.12	8.57	2.26
19	I1_AR8	ActiveIntronRegion	0	3.37	3.28	6.73	0.00	0.00	6.87	0.00	1.84	4.01	12.79	12.92	4.95	17.63	0.91	11.20	0.00	4.01	17.15	0.00	0.00	1.43	1.80	0.00	2.15	9.60	11.90	0.00	0.00	1.34
20	I1_AR9	ActiveIntronRegion	0	3.98	2.35	6.57	0.00	0.00	2.85	0.00	0.00	3.93	9.49	12.75	4.24	15.03	1.49	11.20	0.00	4.87	16.96	0.00	2.81	3.46	1.80	0.52	0.00	13.48	7.41	0.00	1.51	1.63
21	I1_AR10	ActiveIntronRegion	0	5.89	1.72	2.65	1.91	0.00	2.61	2.00	2.94	2.51	10.20	12.15	8.25	8.48	4.41	7.94	0.90	5.93	19.02	0.00	2.37	3.17	1.46	2.67	3.98	11.91	5.88	0.98	5.86	1.25
22	I1_SR7	SilentIntronRegion	0	3.80	4.29	1.70	1.37	0.83	3.50	1.40	1.64	3.05	11.79	9.18	4.99	7.70	2.70	14.83	1.68	6.81	14.00	2.91	3.17	2.80	1.01	2.15	5.40	12.12	5.28	2.92	4.35	2.96
23	I1_AR11	ActiveIntronRegion	0	7.46	5.62	1.55	1.43	3.75	8.27	1.86	3.68	8.14	19.34	21.54	8.03	9.18	4.02	30.56	5.66	8.96	14.19	2.03	4.76	7.83	1.30	3.03	6.03	18.50	8.92	6.24	4.77	3.08
24	I1_SR8	SilentIntronRegion	0	3.20	5.96	1.08	5.94	1.76	3.97	1.10	1.94	6.79	10.90	9.28	5.36	6.43	2.32	27.61	2.11	4.49	10.56	1.62	2.94	4.15	3.46	3.58	5.00	13.70	9.79	3.70	7.25	5.48
25	I1_AR12	ActiveIntronRegion	0	0.00	1.03	1.12	0.00	9.96	2.75	1.26	0.00	2.74	3.88	2.38	1.24	2.68	0.51	3.15	0.00	5.45	10.92	9.05	2.81	0.00	0.00	0.00	4.30	4.02	15.52	0.00	4.69	0.67
26	I1_SR9	SilentIntronRegion	0	0.00	0.00	1.19	0.00	8.72	2.58	0.00	0.00	2.11	1.44	2.23	1.16	1.22	0.00	0.00	0.00	3.13	8.02	9.62	2.64	0.00	0.00	0.00	1.88	1.43	7.47	0.00	1.53	0.00
27	I1_AR13	ActiveIntronRegion	0	3.04	1.67	1.18	0.00	0.66	1.89	0.00	1.41	0.95	6.01	2.55	3.77	8.25	1.42	12.31	0.43	8.07	7.50	2.45	2.11	1.59	0.55	2.01	6.00	5.50	2.66	1.68	1.47	3.96
28	I1_SR10	SilentIntronRegion	0	2.90	3.71	1.81	1.54	1.26	4.22	0.65	2.24	3.02	10.12	7.19	4.23	7.16	2.29	14.05	2.28	5.10	12.08	3.11	3.71	3.39	1.29	3.41	3.57	11.33	6.05	2.30	4.23	4.28
29	I1_AR14	ActiveIntronRegion	0	16.16	11.72	14.23	9.05	7.47	13.46	2.94	4.91	4.20	23.59	52.11	26.02	32.24	27.96	13.43	17.23	15.31	107.24	10.14	9.40	11.41	10.68	26.57	13.76	50.83	46.91	14.79	12.04	6.30
30	I1_SR11	SilentIntronRegion	0	1.99	4.69	1.48	0.00	11.74	1.33	3.46	3.32	2.59	1.88	2.98	4.64	4.78	3.73	12.10	0.00	3.38	19.10	0.00	4.37	2.29	0.03	0.81	5.80	7.56	6.09	2.35	9.87	0.81
31	E2_Aa	NovelBoundary	0	0.00	8.14	0.00	0.00	0.00	3.30	0.00	0.00	0.00	3.79	23.00	2.86	4.55	3.32	7.97	0.00	3.11	18.49	0.00	0.00	5.13	0.00	0.00	0.00	13.64	8.75	0.00	10.78	0.00
32	ER2a	ExonRegion	0	5.74	3.19	2.44	0.68	0.45	2.69	0.09	2.56	2.73	5.34	4.12	4.38	4.18	1.83	12.79	3.44	4.80	16.53	0.89	3.88	3.29	0.67	0.99	1.60	7.33	4.76	2.28	5.16	2.10
33	E2_Ab	KnownBoundary	0	0.00	0.00	2.52	0.00	0.00	0.00	0.00	4.13	8.53	7.11	1.27	3.01	7.45	0.00	8.97	2.75	3.60	0.00	0.00	3.14	0.00	0.00	2.41	0.00	10.15	3.65	0.00	4.49	1.65
34	ER2b	ExonRegion	0	105.88	89.42	240.91	146.50	44.26	134.69	34.25	83.20	19.81	218.00	466.11	238.65	310.50	358.77	106.20	162.58	120.34	761.11	87.75	183.72	82.65	116.47	256.17	125.68	295.14	281.85	115.31	192.70	115.70
35	E2_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	2.04	0.00	1.42	8.34	2.19	28.10	0.00	3.76	9.25	0.00	0.00	0.00	0.00	5.02	0.00	0.00	0.00	0.00	1.98	0.00
36	E2a_E3a	KnownJunction	0	133.43	135.15	411.39	227.12	42.00	165.44	82.50	134.12	30.82	367.62	773.91	474.09	631.35	482.55	150.29	203.72	223.25	1090.50	113.29	245.53	113.31	144.88	414.44	185.91	369.49	552.13	203.56	414.67	289.96
37	I2	Intron	0	2.14	0.22	0.29	1.23	0.00	1.04	0.28	1.46	0.64	2.38	1.60	0.81	2.38	1.04	5.37	0.26	1.49	1.69	1.10	0.77	1.47	0.68	0.44	0.44	2.36	1.73	0.25	2.02	1.20
38	I2_SR1	SilentIntronRegion	0	2.14	0.22	0.29	1.24	0.00	1.04	0.28	1.46	0.64	2.39	1.60	0.81	2.39	1.04	5.38	0.26	1.49	1.69	1.10	0.77	1.47	0.68	0.44	0.44	2.36	1.73	0.25	2.02	1.20
39	E3_Aa	NovelBoundary	0	2.77	0.00	2.39	0.00	0.00	0.00	0.00	0.00	0.00	2.00	1.42	0.00	0.00	0.00	0.00	0.00	2.16	0.00	0.00	3.47	7.66	0.00	0.00	2.63	4.81	0.00	0.00	0.00	0.00
40	ER3a	ExonRegion	0	132.96	123.52	345.48	147.27	47.86	195.71	52.77	106.18	35.04	309.49	577.31	322.95	469.85	428.87	173.24	183.36	149.35	1004.85	111.98	246.63	116.13	173.42	302.85	184.59	405.02	410.52	168.65	278.24	186.46
41	E3_Da	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.96	4.40	1.23	0.00	0.00	0.00	0.00	1.22	0.00	0.00	0.00	7.94	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00
42	E3a_E4a	KnownJunction	0	143.51	183.62	448.84	196.28	69.12	192.03	60.88	120.78	56.55	373.13	834.46	395.96	605.81	414.33	204.70	146.19	209.83	997.65	161.85	221.39	108.94	187.47	321.60	174.24	482.58	532.52	217.53	332.76	232.55
43	E3a_E5a	NovelJunction	0	0.00	0.00	5.11	0.00	0.00	0.00	0.00	0.00	2.74	2.04	3.20	2.56	0.00	0.00	0.00	2.83	2.03	9.25	0.00	8.10	3.77	2.04	2.51	0.00	3.79	2.15	2.39	1.93	1.25
44	I3_AR1	ActiveIntronRegion	0	3.33	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.58	1.31	2.18	0.00	3.01	0.99	1.35	0.00	8.14	2.02	0.08	0.00	0.00	0.00	0.74	0.00	2.51	3.58	0.00	5.16	2.14
45	E4_Aa	NovelBoundary	0	0.00	0.00	1.47	0.00	0.00	1.53	0.00	0.00	1.46	5.43	0.00	0.00	1.66	0.00	25.71	0.00	1.08	0.00	0.00	0.00	2.01	0.00	0.00	0.00	0.00	0.00	0.00	2.02	0.00
46	ER4a	ExonRegion	0	125.62	150.52	390.52	258.10	91.00	193.71	53.01	131.45	45.46	341.60	679.32	357.98	519.01	443.67	158.28	179.57	173.67	1029.73	113.95	257.82	128.64	190.28	356.68	209.93	481.30	467.67	187.35	345.50	220.85
47	E4_Da	NovelBoundary	0	0.00	0.00	3.84	0.00	0.00	0.00	0.00	2.29	1.89	1.64	4.24	3.76	6.40	9.68	34.68	2.98	3.94	19.14	0.00	0.00	3.41	0.00	2.27	0.00	7.43	9.96	2.09	2.16	2.58
48	E4a_E5a	KnownJunction	0	121.51	186.05	304.66	275.01	96.38	208.87	54.35	165.07	46.71	249.54	589.98	323.49	428.53	414.48	128.56	173.65	150.83	1041.70	105.20	240.99	137.62	142.25	311.90	225.50	489.70	421.37	143.53	282.66	151.93
49	I4	Intron	0	3.61	2.62	2.38	6.79	2.83	2.24	1.17	1.65	3.86	5.02	5.76	2.31	3.88	5.33	11.03	0.65	4.48	13.72	4.37	2.84	1.80	1.04	1.24	3.06	9.03	6.11	1.64	5.92	2.96
50	I4_SR1	SilentIntronRegion	0	3.62	2.62	2.38	6.81	2.83	2.25	1.17	1.65	3.87	5.03	5.77	2.31	3.89	5.34	11.05	0.65	4.49	13.75	4.38	2.85	1.81	1.05	1.24	3.06	9.05	6.13	1.64	5.93	2.96
51	E5_Aa	NovelBoundary	0	5.13	4.85	3.64	30.84	0.00	4.91	0.00	3.88	1.22	7.27	4.40	1.36	2.61	10.39	36.28	7.34	5.74	10.02	8.09	0.00	7.14	2.33	0.00	2.99	13.83	21.54	6.41	8.27	1.55
52	ER5a	ExonRegion	0	155.31	185.88	389.43	301.41	107.43	226.07	58.85	149.57	53.61	348.80	910.54	392.98	552.98	496.51	164.61	182.32	162.15	938.18	136.17	276.97	165.96	201.79	377.61	258.93	694.41	529.71	252.23	358.61	234.41
53	E5_Da	NovelBoundary	0	0.00	3.97	0.00	0.00	0.00	1.69	0.00	0.00	3.65	1.68	4.59	1.60	3.92	5.27	26.31	0.00	1.24	4.62	8.09	0.00	0.00	4.76	0.00	10.95	10.38	4.25	0.00	8.67	3.30
54	E5a_E6a	KnownJunction	0	172.47	136.51	370.31	405.07	138.38	283.61	74.21	145.61	68.91	417.03	1040.65	370.57	518.39	460.59	209.48	207.92	134.83	1268.89	225.91	294.74	213.07	243.77	441.77	282.99	793.88	610.07	338.14	436.64	253.41
55	E5a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
56	I5	Intron	0	0.00	0.00	0.64	0.00	1.88	2.12	0.39	1.42	1.40	1.11	3.89	1.54	1.75	4.09	6.72	0.95	1.44	3.77	0.00	0.53	0.27	1.39	0.35	1.24	6.60	3.63	0.00	2.20	0.52
57	I5_SR1	SilentIntronRegion	0	0.00	0.00	0.65	0.00	1.89	2.13	0.39	1.43	1.41	1.12	3.92	1.56	1.76	4.12	6.77	0.96	1.45	3.80	0.00	0.53	0.28	1.40	0.35	1.25	6.64	3.66	0.00	2.21	0.52
58	E6_Aa	NovelBoundary	0	0.00	0.00	1.27	0.00	0.00	5.26	0.00	0.00	1.34	3.32	0.00	1.36	0.00	4.30	8.37	0.00	1.40	9.89	0.00	0.00	0.00	0.00	0.00	0.00	3.37	0.00	0.00	1.75	0.00
59	ER6a	ExonRegion	0	118.48	138.57	349.95	164.29	89.17	190.35	46.33	125.04	69.55	326.14	754.83	343.44	468.99	457.08	185.71	203.05	177.35	935.92	103.30	246.52	124.04	193.93	332.30	209.59	533.22	454.11	208.14	344.86	212.58
60	E6_Da	NovelBoundary	0	0.00	0.00	0.97	10.78	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	2.90	1.33	0.00	3.82	0.95	9.25	0.00	0.00	0.00	1.85	0.00	2.45	5.38	1.89	0.00	0.00	1.88
61	E6a_E7a	KnownJunction	1	100.04	147.56	268.36	128.55	103.01	175.92	30.50	125.96	52.23	280.38	645.60	295.87	413.31	389.18	184.97	182.53	130.91	890.41	64.74	231.31	128.87	179.88	346.03	158.93	465.95	405.75	184.92	334.51	196.99
62	I6	Intron	0	8.04	0.54	2.09	1.79	2.03	2.29	2.35	6.44	3.69	1.80	1.79	1.85	6.80	1.32	16.69	1.48	1.37	6.50	0.00	3.15	0.71	2.25	3.77	2.69	9.89	8.91	2.14	3.53	1.62
63	I6_SR1	SilentIntronRegion	0	12.48	1.50	1.17	0.00	2.27	2.89	3.29	12.86	5.61	2.69	3.60	3.45	7.84	2.00	11.76	2.15	2.78	8.75	0.00	3.85	0.33	3.36	5.47	2.50	15.64	17.20	3.41	2.28	2.33
64	I6_SR2	SilentIntronRegion	0	5.61	0.00	2.62	2.81	1.92	1.98	1.85	2.89	2.64	1.32	0.78	0.97	6.26	0.95	19.59	1.12	0.59	5.28	0.00	2.78	0.93	1.65	2.84	2.81	6.73	4.32	1.44	4.26	1.23
65	E7_Aa	NovelBoundary	0	3.01	0.00	1.30	0.00	0.00	0.00	0.00	0.00	0.00	6.07	0.00	0.00	3.60	0.93	25.91	0.00	2.52	4.62	0.00	0.00	0.00	0.00	0.00	0.00	1.86	0.00	0.00	1.93	2.74
66	ER7a	ExonRegion	0	33.65	51.82	110.04	77.58	24.37	49.02	15.79	24.65	34.27	89.44	154.90	60.24	141.12	99.55	80.52	55.49	37.34	275.36	41.47	59.59	36.10	50.81	85.40	61.55	139.17	102.94	56.11	69.69	66.43
67	E7_Da	KnownBoundary	1	29.79	95.98	26.34	20.28	14.74	62.39	15.51	9.70	27.96	50.89	108.47	37.50	76.87	58.14	43.85	22.72	24.31	76.93	40.24	18.11	33.93	13.95	32.60	67.53	125.89	48.54	77.98	36.26	29.61
68	ER7b	ExonRegion	0	10.59	38.95	15.47	11.28	7.69	30.77	9.79	3.26	18.12	23.76	69.62	19.93	50.20	34.83	14.56	7.56	12.66	61.72	31.94	12.25	18.79	7.78	24.85	39.64	79.59	35.72	33.67	27.97	14.17
69	IG8	Intergenic	0	14.53	38.35	23.71	13.20	7.85	36.32	10.54	9.63	29.12	44.47	100.28	27.22	67.67	32.70	59.89	20.31	37.34	67.74	39.96	20.83	27.76	10.22	26.05	36.78	90.23	52.46	50.80	47.02	38.16
70	IG8_SR3	SilentIntergenicRegion	0	15.71	44.82	26.09	14.04	11.69	52.56	14.48	11.75	28.35	57.19	152.13	38.03	89.43	42.28	63.60	18.37	45.15	97.01	47.28	23.01	37.35	8.24	32.80	41.19	104.72	74.45	77.46	60.90	45.56
71	IG8_AR1	ActiveIntergenicRegion	0	18.30	44.71	29.08	17.09	6.07	32.68	10.01	10.73	37.63	46.34	85.60	25.36	70.76	34.33	73.27	27.50	41.24	63.23	45.04	25.52	26.43	14.90	28.12	41.92	104.75	49.34	40.88	48.77	43.51
72	IG8_SR1	SilentIntergenicRegion	0	2.35	8.34	6.42	0.00	2.68	11.31	3.32	3.01	16.29	11.80	18.93	11.84	7.08	7.20	32.28	10.12	16.35	8.80	12.12	2.60	14.83	5.93	6.90	24.77	23.41	9.43	15.07	14.28	9.18