Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	VPS4A	Gene	0	295.25	264.03	269.71	304.82	235.43	320.86	164.09	142.33	288.65	335.34	247.50	444.69	370.45	384.39	184.97	261.64	364.07	385.30	243.54	278.35	269.52	400.77	375.38	404.80	330.59	526.74	307.79	482.62	187.26
2	254950	Transcript	0	337.13	249.17	262.02	286.98	246.84	344.80	185.93	150.98	239.33	341.19	260.62	432.94	346.40	407.83	159.70	276.18	344.13	410.01	225.36	292.36	264.43	414.97	387.19	400.86	351.07	503.53	304.50	454.86	168.09
3	IG35_AR1	ActiveIntergenicRegion	0	1.25	2.46	0.00	11.43	0.00	2.32	0.00	0.00	0.00	1.44	0.00	1.03	0.00	0.00	0.00	3.22	0.06	0.00	3.39	0.00	0.00	2.48	1.58	0.00	0.00	8.12	0.00	0.00	0.00
4	ER1a	ExonRegion	0	51.05	18.24	38.97	44.81	95.47	36.24	20.04	16.49	14.38	37.62	18.56	64.94	34.45	40.98	11.38	41.99	36.45	53.70	18.88	32.56	35.67	71.40	51.54	30.91	26.20	73.17	34.54	80.44	30.63
5	E1a_E2a	KnownJunction	0	173.00	97.34	35.68	39.04	39.79	141.50	59.22	55.19	64.22	103.58	79.50	155.39	82.03	136.20	53.02	120.03	98.84	150.78	56.65	90.97	105.45	282.47	87.27	134.17	112.18	183.24	39.16	177.93	51.63
6	I1	Intron	0	3.27	2.29	1.16	3.31	0.79	1.81	0.84	0.77	3.19	2.73	0.71	2.35	0.60	3.18	6.44	2.94	6.17	3.08	3.47	1.01	2.80	0.29	1.42	3.58	2.74	5.85	3.81	9.37	2.01
7	I1_SR1	SilentIntronRegion	0	3.28	2.29	1.16	3.32	0.79	1.82	0.84	0.77	3.19	2.74	0.72	2.36	0.60	3.19	6.46	2.95	6.19	3.09	3.48	1.01	2.81	0.29	1.42	3.59	2.75	5.86	3.82	9.40	2.02
8	E2_Aa	NovelBoundary	1	4.84	9.21	1.30	0.00	5.89	1.96	0.00	1.99	7.37	7.55	0.00	0.00	1.53	4.25	0.00	3.21	16.93	0.00	8.09	4.13	5.62	0.00	2.51	5.62	0.00	13.52	1.89	19.72	0.00
9	ER2a	ExonRegion	0	137.30	147.53	60.78	105.84	61.16	171.12	72.32	66.74	73.17	159.30	103.25	268.82	167.71	207.99	93.56	225.87	217.10	236.32	134.56	168.87	115.64	174.32	201.09	136.25	138.61	253.87	91.64	223.49	116.35
10	E2_Da	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	0.00	2.92	0.00	2.62	0.00	1.61	1.48	1.62	4.74	0.00	6.50	2.32	0.00	8.09	0.00	0.00	2.09	0.00	6.10	0.00	5.66	6.01	19.05	0.00
11	E2a_E3a	KnownJunction	0	200.20	172.77	107.13	152.49	136.47	167.70	109.97	73.95	96.50	229.89	198.60	347.98	167.12	315.73	63.18	200.58	293.09	254.29	145.44	259.26	96.63	251.30	234.63	260.50	246.22	292.67	177.72	306.52	136.44
12	I2	Intron	0	0.00	0.00	0.00	3.48	0.00	0.67	0.00	0.89	0.00	0.70	0.00	0.00	0.63	1.32	2.67	2.41	1.45	2.81	0.00	1.34	0.69	0.00	0.00	0.00	0.00	1.53	0.00	7.92	0.00
13	I2_SR1	SilentIntronRegion	0	0.00	0.00	0.00	3.55	0.00	0.68	0.00	0.91	0.00	0.71	0.00	0.00	0.64	1.35	2.72	2.46	1.48	2.86	0.00	1.34	0.71	0.00	0.00	0.00	0.00	1.56	0.00	8.07	0.00
14	E3_Aa	NovelBoundary	1	0.00	7.17	0.00	0.00	0.00	0.00	0.00	2.54	1.40	0.00	0.00	1.54	0.00	1.13	0.00	7.65	5.81	0.00	0.00	0.00	0.00	0.00	4.73	2.21	5.15	7.55	11.03	21.25	0.00
15	ER3a	ExonRegion	0	314.15	256.73	202.18	226.05	193.03	301.05	156.92	140.84	152.20	353.63	242.91	423.32	302.88	463.08	128.78	293.65	339.44	389.77	251.03	319.68	213.84	378.25	344.22	369.26	367.80	432.58	227.91	417.76	149.06
16	E3_Da	NovelBoundary	1	2.83	0.00	2.84	0.00	0.00	1.46	0.00	2.19	4.26	3.40	0.00	1.33	1.59	5.27	19.33	6.73	6.91	13.87	0.00	3.06	0.00	0.00	2.51	3.05	0.00	14.38	9.29	23.14	1.25
17	E3a_E4a	KnownJunction	0	453.42	300.26	173.18	214.83	290.32	390.51	147.56	167.61	251.32	388.15	252.48	487.88	386.46	564.82	184.57	396.57	387.50	443.21	242.10	442.03	285.83	492.30	439.55	461.42	480.19	509.99	342.86	512.17	146.32
18	I3	Intron	0	2.09	1.05	0.91	1.04	0.35	0.65	1.46	0.67	3.53	1.93	0.69	2.43	1.71	2.55	5.05	3.23	4.59	2.16	2.31	1.37	1.55	0.65	1.64	3.42	1.19	6.82	4.24	11.26	0.70
19	I3_SR1	SilentIntronRegion	0	1.45	0.00	0.42	0.26	0.00	0.59	2.88	1.31	4.65	1.97	1.19	1.99	1.84	4.57	7.75	3.49	5.94	2.02	0.00	0.71	2.28	0.00	2.44	4.53	2.55	10.30	5.23	18.81	0.85
20	I3_SR2	SilentIntronRegion	0	2.90	0.95	0.35	2.29	1.75	1.25	2.25	1.43	4.94	3.03	0.48	5.26	2.81	2.94	6.71	6.45	8.40	3.46	1.14	0.00	3.89	0.70	1.63	6.39	3.90	13.34	4.64	15.49	0.59
21	I3_AR1	ActiveIntronRegion	0	2.34	1.08	1.17	0.59	0.04	1.05	1.07	0.57	3.30	1.89	0.98	2.78	1.87	2.08	3.60	3.88	5.35	1.79	0.80	2.28	1.22	0.81	1.17	2.99	0.72	7.17	5.51	11.06	0.97
22	I3_SR3	SilentIntronRegion	0	1.64	0.63	0.63	1.69	0.00	0.27	0.79	0.72	3.81	1.99	0.47	2.20	2.16	2.91	5.77	2.94	3.39	1.51	7.26	0.00	1.16	0.94	1.61	1.60	1.15	5.39	2.66	8.65	0.92
23	I3_AR2	ActiveIntronRegion	0	2.03	1.74	1.13	0.97	0.66	0.19	1.64	0.25	2.73	1.56	0.32	1.34	0.79	2.02	4.84	1.34	2.63	2.61	2.16	1.86	1.17	0.49	1.96	3.78	0.39	3.83	3.22	9.04	0.18
24	E4_Aa	NovelBoundary	0	3.01	0.00	0.92	8.41	0.00	1.46	8.24	0.00	6.79	4.99	0.00	0.00	0.00	2.15	0.00	0.00	3.56	0.00	8.09	3.31	0.00	2.48	2.51	0.00	0.00	10.08	0.00	10.56	0.00
25	ER4a	ExonRegion	0	433.88	262.90	191.40	268.45	259.52	413.71	191.53	153.49	231.43	402.86	295.99	483.48	373.57	560.22	132.70	363.85	394.92	485.18	274.25	390.96	290.52	486.45	441.59	454.55	430.18	596.43	323.56	532.63	172.23
26	E4_Da	NovelBoundary	0	2.60	0.00	1.54	0.00	0.00	1.76	0.00	0.00	2.92	5.23	0.00	1.17	6.18	2.06	8.37	3.60	5.54	4.62	0.00	0.00	3.49	0.00	2.22	2.69	0.00	8.24	0.00	10.29	1.68
27	E4a_E5a	KnownJunction	0	456.90	234.43	211.38	328.50	371.52	518.31	279.67	146.56	253.79	557.44	326.75	501.71	367.45	532.38	221.84	390.07	426.21	647.93	193.77	316.82	303.76	481.55	470.63	508.61	446.14	686.58	357.52	592.87	224.00
28	E5_Aa	NovelBoundary	0	8.79	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	2.92	8.37	6.96	0.00	9.25	0.00	4.13	0.00	0.00	4.53	0.00	0.00	1.59	0.00	1.93	0.00
29	ER5a	ExonRegion	0	411.90	295.01	274.73	254.18	200.96	459.13	218.81	173.78	250.72	447.83	333.45	477.23	428.80	560.10	156.49	351.50	418.16	511.88	301.95	355.85	344.08	487.48	497.45	406.32	452.38	592.41	332.12	498.32	180.51
30	E5_Da	NovelBoundary	0	0.00	0.00	1.35	0.00	0.00	3.84	0.00	0.00	0.00	1.52	0.00	3.83	0.00	1.13	18.34	3.75	4.75	0.00	0.00	0.00	3.93	0.00	0.00	5.38	1.86	2.19	8.80	10.60	0.00
31	E5a_E6a	KnownJunction	0	452.60	260.80	273.47	264.01	217.08	480.25	252.49	166.37	251.60	484.10	336.09	510.41	407.10	512.86	151.88	289.85	356.48	516.29	331.57	359.00	391.28	436.19	534.31	388.74	406.51	598.48	375.46	523.27	132.78
32	I5	Intron	0	2.04	0.87	0.00	0.00	0.00	0.37	0.27	0.50	0.99	1.76	0.00	1.84	0.00	2.39	2.74	1.68	2.23	1.31	4.33	0.27	1.16	0.73	1.96	2.04	0.39	1.71	3.48	10.39	0.18
33	I5_SR1	SilentIntronRegion	0	2.06	0.88	0.00	0.00	0.00	0.38	0.28	0.50	1.00	1.78	0.00	1.86	0.00	2.42	2.77	1.70	2.25	1.32	4.38	0.27	1.17	0.74	1.98	2.06	0.39	1.72	3.51	10.50	0.18
34	E6_Aa	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	1.57	0.00	1.94	3.01	0.00	0.00	2.68	0.00	4.52	19.93	6.81	3.15	0.00	0.00	0.00	1.60	0.00	7.39	8.19	3.45	5.79	2.29	23.99	0.00
35	ER6a	ExonRegion	0	389.18	258.84	362.09	396.00	276.30	457.07	203.58	189.64	240.54	401.63	335.73	451.85	398.39	474.00	152.75	306.61	389.87	441.26	242.09	318.59	360.80	454.00	489.51	428.75	395.83	601.61	411.64	521.08	178.98
36	E6_Da	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	3.72	0.00	2.14	4.75	0.00	2.75	6.39	0.00	6.16	16.74	6.96	7.45	0.00	0.00	0.00	0.00	0.00	10.49	5.26	0.00	2.19	0.00	33.16	3.37
37	E6a_E7a	KnownJunction	0	301.65	275.82	323.92	427.07	262.62	449.36	196.08	200.51	271.79	395.10	311.41	426.08	335.23	407.73	126.57	337.28	304.28	381.69	226.36	289.86	329.59	427.69	458.17	420.86	312.97	545.70	348.03	448.69	160.48
38	I6	Intron	0	4.94	1.57	1.14	0.00	0.42	0.47	0.52	0.63	1.49	0.74	0.81	1.53	0.83	4.29	4.02	5.15	5.99	4.20	6.55	0.47	0.97	0.46	1.39	1.47	0.85	4.43	1.10	10.86	0.86
39	I6_SR1	SilentIntronRegion	0	4.97	1.58	1.15	0.00	0.42	0.47	0.52	0.63	1.49	0.74	0.82	1.54	0.84	4.32	4.04	5.18	6.02	4.22	6.58	0.47	0.98	0.46	1.40	1.48	0.86	4.45	1.10	10.92	0.86
40	E7_Aa	NovelBoundary	0	0.00	0.00	1.07	0.00	0.00	0.00	2.63	0.00	1.37	1.72	6.07	1.33	0.00	0.00	0.00	7.50	3.13	0.00	16.18	0.00	2.05	0.00	0.00	2.69	1.93	0.00	0.00	10.33	1.68
41	ER7a	ExonRegion	0	406.27	271.41	353.74	358.81	270.04	480.91	231.76	180.03	286.03	410.76	356.49	490.35	404.54	441.45	153.02	307.39	364.35	444.58	273.43	325.68	410.25	461.28	483.05	499.25	418.03	582.29	471.91	532.39	186.12
42	E7_Da	NovelBoundary	0	0.00	0.00	1.54	9.71	0.00	0.00	0.00	0.00	0.00	1.76	4.84	0.00	3.53	5.05	0.00	3.06	3.60	0.00	0.00	3.72	1.68	0.00	2.17	0.00	0.00	3.82	2.48	9.62	0.00
43	E7a_E8a	KnownJunction	0	421.80	255.95	349.38	257.54	260.70	491.99	228.97	239.08	314.48	391.23	425.33	450.11	337.07	403.23	161.65	284.58	346.08	384.65	307.51	347.75	376.60	525.89	420.15	560.53	507.55	576.89	440.97	482.70	165.36
44	I7	Intron	0	1.92	2.89	0.21	0.00	0.00	1.23	0.00	0.00	0.86	0.74	0.15	0.16	0.75	1.39	3.77	2.86	1.34	3.70	3.27	2.12	2.01	0.23	0.93	0.28	0.55	4.23	1.64	4.39	0.34
45	I7_SR1	SilentIntronRegion	0	1.93	2.90	0.22	0.00	0.00	1.24	0.00	0.00	0.87	0.74	0.15	0.16	0.75	1.40	3.79	2.88	1.34	3.72	3.29	2.12	2.02	0.23	0.93	0.28	0.55	4.24	1.65	4.41	0.35
46	E8_Aa	NovelBoundary	0	0.00	0.00	1.49	0.00	0.00	1.88	0.00	0.00	0.00	2.04	1.33	0.00	0.00	0.00	8.37	0.00	0.86	0.00	0.00	3.56	0.00	0.00	0.00	0.00	0.00	3.60	0.00	7.28	1.58
47	ER8a	ExonRegion	0	383.58	305.94	368.37	333.53	285.10	425.95	246.63	160.24	346.39	372.70	306.50	491.53	409.44	431.18	159.14	316.03	381.80	465.76	263.05	339.37	333.93	477.40	444.19	537.58	437.81	647.11	381.18	518.89	188.98
48	E8_Da	NovelBoundary	1	8.49	4.65	2.02	18.77	0.00	13.39	0.00	0.00	5.36	5.03	0.00	4.64	5.67	8.93	25.51	10.40	29.26	27.74	24.28	11.58	3.45	2.48	0.00	22.73	3.67	2.19	2.34	27.27	3.30
49	E8a_E9a	KnownJunction	0	396.44	331.96	362.81	370.13	298.72	446.33	266.45	150.14	305.83	347.81	313.37	511.20	443.75	403.91	157.06	303.01	398.82	527.98	169.94	278.12	294.33	428.80	464.18	482.11	415.90	635.94	486.39	476.72	233.27
50	I8	Intron	0	19.06	5.85	3.03	7.81	0.89	8.73	2.93	2.00	4.99	8.12	1.94	7.83	3.06	9.85	13.47	10.10	24.38	13.00	18.55	10.15	3.37	2.94	2.30	5.86	6.74	5.99	2.33	13.61	2.55
51	I8_AR1	ActiveIntronRegion	0	19.20	5.89	3.06	7.86	0.87	8.79	2.95	2.02	5.03	8.18	1.96	7.88	3.08	9.92	13.57	10.17	24.54	13.09	18.69	10.23	3.39	2.97	2.31	5.90	6.79	6.03	2.34	13.70	2.57
52	E9_Aa	NovelBoundary	0	24.60	7.85	4.31	0.00	0.00	14.50	2.75	0.00	5.82	5.11	2.85	17.05	0.00	8.93	0.00	7.04	18.50	19.26	24.28	3.39	8.06	3.99	0.00	13.10	1.93	8.50	9.00	11.19	1.72
53	ER9a	ExonRegion	0	344.78	254.22	323.04	388.17	279.37	331.75	218.22	141.60	275.52	321.19	241.83	532.07	399.42	398.94	177.77	244.83	410.80	438.45	239.89	286.02	268.68	448.68	439.59	403.23	334.57	603.58	338.27	560.36	202.19
54	E9_Da	NovelBoundary	0	2.36	0.00	5.21	0.00	6.04	13.81	7.27	4.83	11.45	8.87	2.59	18.89	2.87	18.41	0.00	20.96	32.35	28.51	8.09	4.13	3.81	2.09	4.24	3.05	8.15	8.37	0.00	4.13	10.89
55	E9a_E10a	KnownJunction	0	342.94	252.56	262.15	306.28	276.32	231.74	278.41	175.67	282.48	316.69	229.41	425.68	374.78	391.62	282.04	242.04	339.48	562.65	291.33	279.28	218.12	499.74	380.11	409.44	281.68	489.99	299.78	367.49	176.69
56	I9	Intron	0	21.93	24.27	18.08	17.77	10.48	18.60	11.81	13.98	37.67	31.22	20.23	40.80	27.71	43.40	39.22	39.67	51.99	41.10	22.41	11.02	22.95	7.44	19.55	45.98	30.43	33.07	27.37	38.21	29.88
57	I9_AR1	ActiveIntronRegion	0	15.43	6.77	4.87	13.18	2.99	6.74	4.63	3.67	9.78	6.63	2.00	8.12	2.18	16.29	9.59	19.55	26.98	21.48	3.42	5.13	4.36	1.93	1.11	11.86	6.79	10.83	1.12	7.74	8.71
58	I9_AR2	ActiveIntronRegion	0	32.13	48.65	36.45	25.18	20.90	35.32	21.97	28.31	76.41	65.21	45.17	85.90	62.58	81.65	80.33	68.73	88.34	69.61	48.51	19.48	48.59	15.08	44.70	93.34	63.15	64.23	63.12	80.28	59.40
59	E10_Aa	NovelBoundary	0	43.12	31.12	35.55	38.61	14.15	36.87	26.49	28.76	82.83	67.55	52.23	90.18	53.94	101.06	154.67	75.20	172.83	127.15	56.65	11.58	48.81	15.61	48.81	72.20	46.33	82.31	71.47	137.58	95.61
60	ER10a	ExonRegion	0	360.26	321.36	370.97	419.21	389.94	294.07	180.20	192.11	311.52	373.92	271.53	552.89	504.62	472.42	271.85	270.97	438.70	467.77	302.27	333.07	272.40	507.20	421.18	513.39	406.13	601.38	330.01	550.28	224.45
61	E10_Da	NovelBoundary	1	28.02	28.31	48.16	10.78	32.72	49.95	10.58	7.22	90.14	84.40	47.45	82.02	71.14	75.38	71.36	71.07	63.32	61.39	56.20	11.25	56.11	12.98	81.66	91.40	80.32	68.92	82.99	86.90	53.45
62	E10a_E11a	KnownJunction	0	386.53	347.57	572.25	538.37	479.84	243.63	195.27	235.19	346.49	311.70	243.52	558.48	531.23	475.37	265.49	250.61	476.57	421.76	194.22	326.66	222.93	522.88	457.87	551.38	425.68	488.49	254.15	681.48	247.21
63	I10	Intron	0	12.41	27.35	23.15	13.83	9.01	25.95	4.73	9.27	34.63	35.49	25.16	46.34	37.83	41.12	33.70	27.35	27.92	46.30	39.39	12.30	37.10	9.08	34.28	46.02	40.17	50.10	37.34	57.71	22.18
64	I10_AR1	ActiveIntronRegion	1	14.33	39.90	29.40	19.52	15.72	34.38	4.49	9.12	46.23	53.25	35.36	50.21	48.61	45.29	38.96	33.45	34.73	59.23	49.02	17.08	47.33	13.84	36.25	52.73	51.31	58.75	56.69	72.65	33.96
65	I10_AR2	ActiveIntronRegion	0	13.86	28.90	31.24	5.15	9.36	28.31	6.27	10.58	34.12	30.08	25.36	59.61	41.73	47.46	32.76	26.33	39.67	39.28	37.48	13.30	35.86	9.50	42.00	42.75	39.02	47.41	32.90	65.96	16.18
66	I10_SR2	SilentIntronRegion	1	6.73	5.10	0.00	16.88	0.00	14.02	0.00	10.11	14.95	28.21	13.04	19.41	23.42	19.19	25.85	24.76	0.00	36.78	35.09	2.16	24.56	2.83	24.12	40.47	25.77	44.39	28.74	54.97	20.01
67	I10_AR6	ActiveIntronRegion	0	4.29	0.00	2.81	0.00	0.00	4.81	0.00	0.00	0.00	2.89	2.38	7.42	3.90	4.08	0.00	0.00	0.00	4.09	0.00	0.00	2.85	0.00	0.00	4.30	0.00	0.00	2.75	5.71	0.00
68	I10_AR7	ActiveIntronRegion	0	5.07	1.79	4.69	0.00	0.00	5.75	2.02	0.00	2.86	10.24	3.57	11.47	9.21	10.39	4.07	3.68	2.19	6.70	4.53	2.30	5.71	0.00	5.59	9.00	6.63	14.29	6.16	12.15	2.32
69	I10_AR8	ActiveIntronRegion	0	10.56	17.78	12.12	20.50	2.33	15.61	5.52	7.90	30.36	20.69	15.95	34.63	22.87	38.97	34.96	23.04	12.54	47.57	32.87	8.90	32.55	4.30	26.04	49.03	35.35	48.53	19.22	21.80	15.99
70	E11_Aa	NovelBoundary	1	13.63	31.41	12.11	37.96	5.45	19.53	5.21	0.00	29.30	48.37	21.95	50.21	52.32	26.28	29.30	56.00	27.15	41.61	24.28	14.72	14.68	2.48	32.36	7.84	25.65	62.14	47.66	100.92	44.34
71	ER11a	ExonRegion	0	262.00	310.91	284.87	333.26	239.36	308.45	150.36	145.43	405.61	357.97	250.34	480.28	418.37	370.14	248.88	262.44	407.81	384.30	272.25	279.14	282.77	419.19	370.67	460.79	329.88	581.63	329.69	546.49	226.17
72	IG36	Intergenic	0	18.34	34.19	24.77	11.13	16.52	40.61	8.11	11.87	42.21	55.94	48.14	83.69	44.24	56.47	25.33	36.38	56.99	50.68	63.34	21.25	59.97	13.21	46.36	47.95	47.80	59.26	60.16	58.02	46.98
73	IG36_AR1	ActiveIntergenicRegion	0	18.37	34.24	24.80	11.15	16.55	40.68	8.12	11.89	42.28	56.02	48.21	83.82	44.31	56.56	25.37	36.44	57.08	50.76	63.43	21.28	60.06	13.23	46.43	48.02	47.87	59.35	60.25	58.11	47.05