Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	RUNDC2A	Gene	0	62.73	22.85	30.84	5.38	14.08	27.64	9.83	7.81	17.86	50.74	72.39	23.47	7.44	61.43	75.72	88.80	117.86	176.00	41.89	43.35	22.49	27.28	82.83	27.77	77.05	107.29	27.34	132.28	26.48
2	268271	Transcript	0	55.44	24.81	40.26	6.45	23.20	26.74	9.00	7.73	9.88	48.60	87.36	27.68	7.84	60.32	34.04	92.07	115.28	136.53	27.86	30.79	20.77	32.51	85.19	16.16	60.33	103.10	28.83	100.71	27.59
3	IG41_AR1	ActiveIntergenicRegion	0	3.95	5.88	3.60	25.02	0.00	0.00	8.91	4.94	5.16	3.88	0.60	10.42	0.00	3.21	13.49	0.00	0.00	0.00	6.43	5.03	2.87	3.63	0.95	7.22	1.92	17.95	11.06	12.03	13.37
4	ER1a	ExonRegion	0	19.38	9.76	15.68	4.24	16.97	10.26	2.57	4.72	0.60	15.11	20.61	7.92	3.33	10.27	12.18	54.72	30.46	46.67	8.33	7.01	3.87	6.79	27.67	0.59	13.01	35.78	7.59	18.19	12.08
5	E1a_E2a	KnownJunction	0	22.18	26.47	42.28	8.84	28.15	12.89	7.44	4.18	1.40	16.62	39.45	14.31	10.00	20.94	23.92	24.56	72.95	13.87	8.09	8.27	3.61	6.95	34.23	2.57	34.66	81.15	14.96	48.66	30.97
6	I1_AR1	ActiveIntronRegion	0	5.50	0.00	0.66	0.00	0.49	1.98	1.00	0.18	1.83	2.94	1.18	0.55	1.47	1.03	9.24	2.48	4.26	2.90	2.54	1.64	1.42	1.25	0.72	0.43	0.50	3.99	0.00	0.60	0.37
7	I1_SR1	SilentIntronRegion	0	3.47	0.00	0.00	0.00	0.12	0.42	0.00	0.00	1.96	1.30	0.51	0.46	0.66	0.57	3.04	0.59	1.45	1.04	2.57	0.00	0.77	2.09	0.00	0.00	1.36	0.43	0.00	1.03	0.22
8	I1_AR2	ActiveIntronRegion	0	3.86	1.58	0.41	0.00	1.32	1.18	1.30	0.23	3.59	3.20	2.49	1.65	1.75	0.83	5.34	3.93	5.82	2.37	1.08	0.00	1.11	0.26	0.22	1.06	0.70	0.97	2.03	1.31	1.39
9	I1_SR2	SilentIntronRegion	0	4.07	0.00	0.00	0.00	2.37	2.63	0.98	0.00	3.74	1.26	1.00	1.59	1.38	0.00	5.04	1.14	3.31	1.47	1.98	0.00	0.73	0.00	2.15	1.37	0.00	0.00	0.00	2.30	0.75
10	I1_AR3	ActiveIntronRegion	0	4.04	0.87	0.45	0.00	0.66	1.11	0.54	0.00	2.79	1.87	0.64	1.48	0.37	0.73	8.33	1.14	2.73	4.62	2.15	3.34	0.58	0.00	1.25	0.58	0.96	1.27	0.99	2.31	1.28
11	I1_AR4	ActiveIntronRegion	0	2.68	0.00	0.25	0.00	0.00	1.25	0.00	0.62	0.51	0.99	0.54	1.22	1.16	0.41	11.10	0.96	2.29	1.01	0.00	0.00	0.00	0.41	0.82	0.00	0.65	1.12	1.67	0.36	0.61
12	I1_SR4	SilentIntronRegion	0	0.63	0.00	0.34	0.00	0.00	0.00	0.00	1.61	0.08	0.83	0.03	0.82	0.79	1.03	2.71	0.51	2.26	1.75	0.00	0.25	0.66	0.61	0.91	0.02	0.82	1.70	0.00	0.46	0.00
13	I1_AR5	ActiveIntronRegion	0	2.12	0.80	0.00	0.00	3.63	0.68	0.00	1.82	4.27	1.43	3.52	0.00	0.48	0.23	9.27	0.58	4.30	0.61	0.79	1.26	0.78	1.52	1.84	2.12	1.42	1.95	0.00	3.44	0.99
14	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	2.51	0.00	0.00	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	1	29.90	10.33	35.94	12.97	24.59	8.78	7.06	3.71	4.55	21.24	55.32	10.75	5.30	23.69	18.52	40.04	68.20	34.60	7.59	5.39	12.88	15.79	39.29	6.42	41.22	100.43	8.42	35.23	28.96
16	E2a_E3a	KnownJunction	0	16.46	4.36	22.22	0.00	5.89	4.53	4.75	4.88	7.25	18.18	22.62	8.01	3.95	23.82	25.51	6.88	43.44	52.40	0.00	8.27	3.89	13.52	26.94	0.00	11.71	21.71	10.04	10.24	11.39
17	ER3a	ExonRegion	1	29.89	13.33	10.92	0.00	10.72	9.49	2.28	6.60	9.52	22.75	28.79	7.19	3.95	32.71	21.45	34.67	39.03	27.24	16.74	12.41	11.57	26.70	20.27	0.65	20.87	22.86	4.60	11.38	6.51
18	E3_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.52	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
19	E3a_E4a	KnownJunction	0	46.83	21.04	3.89	0.00	21.07	12.35	2.23	9.56	11.97	26.24	40.59	11.05	6.31	50.76	19.93	79.94	43.62	56.00	8.09	11.58	18.93	39.09	14.33	2.81	27.13	20.21	2.04	24.31	8.15
20	E3a_E5a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.78	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.75	4.84	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.52	0.00	6.25	0.00
22	ER4a	ExonRegion	0	53.35	23.10	15.13	0.00	10.32	27.71	9.05	9.72	10.15	56.17	74.74	26.83	6.20	56.98	32.71	103.72	100.35	87.60	31.32	16.37	26.45	22.64	82.82	6.80	44.61	109.32	7.99	59.35	42.90
23	E4a_E5a	KnownJunction	0	43.24	11.92	31.17	0.00	14.00	16.23	5.26	7.07	11.66	41.14	105.82	27.71	4.84	58.40	35.08	52.78	102.21	69.35	24.28	22.08	21.22	19.79	76.04	5.44	38.91	107.24	21.02	65.02	28.72
24	E4a_E6a	NovelJunction	0	2.42	0.00	0.00	0.00	7.37	1.53	0.00	0.00	0.00	1.72	0.00	0.00	0.00	1.37	0.00	0.00	1.22	0.00	0.00	0.00	0.00	2.38	0.00	0.00	0.00	0.00	0.00	1.84	0.00
25	E4a_E7a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.06	0.00	3.60	0.00	0.00	0.00	0.00	0.00	2.43	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	I4_SR2	SilentIntronRegion	0	0.92	0.43	0.19	0.32	0.23	0.40	0.29	0.41	2.95	1.34	1.01	1.10	1.00	2.29	6.27	1.15	5.59	1.67	1.68	0.70	1.42	0.32	0.57	2.51	3.11	6.66	0.85	9.40	1.17
27	I4_AR2	ActiveIntronRegion	0	0.00	0.00	0.00	5.65	0.00	0.00	0.00	0.00	0.37	1.01	0.00	0.00	0.00	0.31	3.54	1.60	3.83	1.14	0.00	0.00	0.81	0.00	0.48	0.00	0.00	1.15	0.00	3.84	0.85
28	E5_Aa	NovelBoundary	0	3.01	0.00	3.04	0.00	0.00	0.00	0.00	0.00	3.11	2.04	6.71	3.34	3.18	11.34	0.00	7.65	3.96	0.00	0.00	0.00	2.05	0.00	0.00	0.00	3.79	4.12	0.00	29.34	0.00
29	ER5a	ExonRegion	1	50.99	27.02	70.66	8.00	22.32	27.19	10.67	6.84	7.53	47.98	77.00	22.71	9.01	59.77	34.22	85.22	95.43	81.02	37.68	20.05	24.09	23.76	86.23	13.76	46.56	75.44	13.80	50.58	23.25
30	E5_Da	NovelBoundary	0	0.00	0.00	1.47	0.00	0.00	0.00	0.00	0.00	1.19	1.96	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
31	E5a_E6a	KnownJunction	0	75.27	38.49	70.11	21.57	70.15	36.18	13.45	6.82	10.20	51.13	92.21	30.51	6.05	86.94	24.72	86.14	90.26	102.49	40.46	26.55	25.99	40.89	115.64	30.57	91.64	97.16	41.50	77.69	30.01
32	E6_Aa	NovelBoundary	0	2.71	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.68	0.00	0.00	0.00	0.00	1.95	0.00	0.00	3.71	13.49	0.00	0.00	0.00	0.00	0.00	2.69	3.52	1.97	0.00	6.60	0.00
33	ER6a	ExonRegion	0	91.51	36.18	67.09	11.33	49.25	54.08	14.20	13.56	13.88	85.02	174.64	57.23	13.78	105.24	47.01	165.57	192.57	286.14	53.99	73.51	28.33	56.04	168.52	33.18	118.37	199.88	73.00	224.95	34.92
34	E6_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.40	0.00	0.00	0.00	2.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
35	E6a_E7a	KnownJunction	0	95.56	39.17	57.20	21.57	21.37	67.99	19.11	9.51	14.34	102.02	215.46	74.91	13.31	114.70	53.02	200.66	270.97	379.90	48.55	58.30	43.48	83.57	190.74	29.07	108.73	227.19	74.40	304.59	36.15
36	E7_Aa	NovelBoundary	0	0.00	0.00	0.00	8.63	0.00	0.00	2.92	0.00	0.00	3.83	0.00	0.00	0.00	0.00	9.97	0.00	1.19	19.26	0.00	0.00	0.00	2.24	0.00	0.00	1.74	4.03	0.00	2.29	0.00
37	ER7a	ExonRegion	0	117.10	44.97	67.97	2.58	21.51	59.44	16.53	11.56	13.45	103.53	185.13	51.70	15.19	121.67	67.34	212.48	270.98	492.53	75.76	84.86	43.68	69.48	212.39	37.70	154.52	234.67	60.83	296.40	54.56
38	E7_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.00	0.00	0.00	2.50	4.62	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.16	1.68
39	E7a_E8a	KnownJunction	0	80.99	46.73	73.40	0.00	21.81	30.73	11.21	10.05	9.23	78.13	126.16	45.78	10.25	84.31	0.00	165.24	207.54	164.90	16.18	62.69	23.87	41.67	120.12	40.20	78.08	122.09	66.94	154.07	43.74
40	E8_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	0.00	0.00	0.00	0.00	1.93	0.00	0.00	2.29	0.00
41	ER8a	ExonRegion	0	58.89	19.34	20.22	5.63	9.88	23.19	9.17	7.21	22.49	43.80	51.86	18.61	6.11	54.57	95.06	68.48	101.25	153.18	40.90	44.47	19.70	20.90	62.56	32.59	74.93	91.34	25.28	130.03	21.50