Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ALDH1A3	Gene	0	10.95	26.00	2.98	16.95	5.46	6.04	1.41	4.91	2.46	5.27	5.26	9.56	4.20	28.04	13.57	23.25	28.00	61.78	28.48	6.44	123.12	1.15	23.78	18.03	36.38	18.14	50.04	8.56	12.39
2	329841	Transcript	0	15.51	16.47	4.60	9.24	4.03	4.56	0.91	5.57	0.63	7.99	3.40	10.57	4.68	35.97	7.98	27.17	31.03	67.52	21.89	3.83	105.74	1.70	31.11	12.41	36.90	27.58	43.26	9.00	15.95
3	415812	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
4	425801	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
5	346623	Transcript	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
6	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.05	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.13	0.33	0.00	0.06	0.00	0.43	0.00	0.15	0.00	0.21	0.00	0.00
7	E1_Ab	KnownBoundary	0	0.00	0.00	0.00	0.00	0.00	1.73	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.50	8.09	0.00	2.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
8	ER1b	ExonRegion	0	5.31	3.30	1.69	14.55	2.47	2.08	0.00	0.64	0.57	2.92	2.10	2.31	0.33	12.66	2.63	18.37	19.12	48.23	6.52	4.12	50.16	0.00	13.10	1.81	12.76	11.51	10.17	7.10	9.79
9	E1a_E2a	KnownJunction	0	5.78	0.00	0.00	20.71	0.00	0.00	0.00	2.49	0.00	1.60	0.00	3.31	0.00	30.66	0.00	9.10	10.96	80.65	16.18	8.27	52.87	2.48	7.19	7.00	10.30	7.21	8.95	6.69	1.98
10	ER2a	ExonRegion	0	16.56	10.86	1.74	10.31	0.00	6.56	0.98	5.86	1.48	7.66	4.62	7.76	0.12	33.15	9.01	46.95	35.66	110.93	22.03	6.77	141.93	0.60	37.68	15.71	62.37	27.36	25.55	18.37	21.17
11	E2a_E3a	KnownJunction	0	2.83	0.00	1.05	0.00	0.00	3.88	0.00	0.00	1.40	1.60	1.36	8.28	1.31	38.84	8.37	17.82	30.30	33.52	8.09	3.89	65.74	2.29	57.57	15.73	26.07	23.09	42.79	23.41	24.79
12	ER3a	ExonRegion	0	10.17	9.39	3.41	10.37	4.42	5.34	1.04	4.30	0.44	4.44	2.37	8.31	2.53	31.31	7.23	23.57	21.86	71.56	10.78	3.03	71.56	0.72	29.66	12.69	23.52	18.81	17.72	10.69	8.01
13	E3a_E4a	KnownJunction	0	2.71	0.00	4.21	0.00	7.07	3.76	2.92	2.49	1.37	7.83	1.61	5.84	5.95	37.80	0.00	27.77	36.01	103.13	40.46	3.47	112.79	2.04	23.84	10.59	51.86	30.34	19.73	19.68	20.44
14	E3a_E7a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E4_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	1.76	0.00	0.00	0.00	3.99	1.46	0.00	0.00	1.37	0.00	0.00	5.92	0.00	0.00	0.00	2.05	0.00	2.51	0.00	1.63	0.00	5.07	0.00	0.00
16	ER4a	ExonRegion	0	19.77	12.56	3.91	28.61	4.67	5.28	2.49	7.53	2.43	12.18	5.98	10.13	3.20	61.55	13.30	41.82	49.56	103.98	24.84	16.65	144.97	1.67	50.52	19.47	64.87	32.14	27.43	19.66	13.00
17	E4_Da	KnownBoundary	0	19.29	22.49	3.34	47.02	0.00	7.67	2.86	6.87	2.92	22.21	3.07	8.70	1.31	44.91	23.52	47.20	41.26	117.77	8.09	11.25	134.65	0.00	54.47	13.58	75.47	39.31	43.83	19.50	9.44
18	E4a_E10a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
19	E4_Db	NovelBoundary	0	26.07	27.34	1.02	9.06	0.00	5.26	0.00	14.43	0.00	21.05	1.58	12.02	2.74	50.43	0.00	17.82	24.81	126.38	48.55	8.19	168.42	4.23	55.36	8.13	61.00	19.61	80.01	12.04	14.29
20	E4b_E6b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
21	ER4b	ExonRegion	0	30.72	27.78	3.04	27.73	0.83	8.94	2.02	12.89	2.25	30.08	3.37	13.50	2.38	68.29	13.07	42.28	50.63	118.26	35.45	11.71	201.00	2.33	75.65	13.80	89.27	37.26	81.81	21.33	17.22
22	E4_Dc	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	3.61	2.63	0.00	0.00	2.04	0.00	0.00	0.00	1.37	0.00	7.11	4.64	4.62	0.00	0.00	0.00	0.00	5.02	2.75	7.50	0.00	0.00	4.49	0.00
23	E4c_E5a	KnownJunction	0	26.37	28.21	5.63	17.69	14.74	7.25	2.69	4.68	0.00	11.26	5.88	26.57	1.46	48.61	16.54	35.88	47.72	69.61	16.18	3.14	145.28	2.38	46.20	19.86	36.94	52.78	75.59	12.22	29.38
24	ER4c	ExonRegion	0	26.96	31.46	3.97	14.06	9.96	7.67	1.86	12.25	0.82	22.05	3.71	20.31	2.25	60.11	10.77	35.04	47.93	105.81	35.51	5.73	186.42	2.84	62.04	18.70	61.57	45.34	87.28	15.61	26.38
25	I4	Intron	0	1.79	0.54	0.56	0.00	0.82	0.92	0.34	0.00	0.19	4.10	0.60	0.72	0.00	0.61	4.92	2.07	1.75	2.90	0.53	0.00	1.91	1.51	1.51	2.52	3.11	0.53	3.98	3.00	2.46
26	I4_SR1	SilentIntronRegion	0	1.71	0.00	0.57	0.00	0.00	1.62	0.08	0.00	0.38	3.67	0.00	0.53	0.00	0.91	3.27	1.70	2.88	3.94	1.09	0.00	2.44	1.42	0.62	2.66	3.44	0.00	1.88	2.12	0.74
27	I4_AR2	ActiveIntronRegion	0	2.00	1.12	0.58	0.00	1.71	0.26	0.62	0.00	0.00	4.83	1.25	0.97	0.00	0.30	6.75	2.60	0.71	2.02	0.00	0.00	1.49	1.70	2.53	2.53	2.97	1.10	6.40	4.10	4.39
28	E5_Aa	NovelBoundary	0	5.43	0.00	0.00	0.00	0.00	1.88	0.00	0.00	0.00	10.19	0.00	1.54	0.00	0.00	0.00	0.00	5.18	0.00	0.00	0.00	2.05	0.00	0.00	2.57	1.74	3.26	0.00	1.98	1.68
29	ER5a	ExonRegion	0	17.60	19.07	8.74	5.43	3.54	8.25	1.14	9.26	1.16	10.71	6.81	15.30	8.42	54.92	17.61	36.12	46.29	91.78	24.97	5.67	129.46	3.14	41.30	17.21	51.89	32.67	54.92	13.49	26.32
30	E5_Da	NovelBoundary	0	0.00	0.00	1.32	0.00	0.00	5.18	0.00	0.00	1.28	7.35	0.00	1.48	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	8.91	1.59	5.92	0.00	2.29	2.74
31	E5a_E6a	KnownJunction	0	16.57	13.09	8.27	0.00	0.00	7.06	0.00	4.38	1.37	7.23	2.88	3.19	15.64	50.03	8.17	46.82	40.09	113.28	32.37	7.77	147.00	2.09	29.40	17.29	55.92	24.55	52.08	10.33	19.25
32	I5	Intron	0	1.12	1.60	1.75	0.00	1.03	2.16	0.42	0.00	1.35	8.03	2.37	2.14	0.14	2.85	1.45	1.16	3.76	2.86	1.34	0.00	0.75	2.08	1.33	3.16	4.80	3.96	3.84	2.22	3.37
33	I5_AR1	ActiveIntronRegion	0	1.13	1.60	1.76	0.00	1.03	2.17	0.42	0.00	1.35	8.07	2.38	2.14	0.14	2.86	1.45	1.16	3.78	2.88	1.35	0.00	0.75	2.09	1.33	3.17	4.82	3.97	3.86	2.23	3.39
34	E6_Aa	NovelBoundary	0	0.00	0.00	3.09	0.00	7.37	0.00	2.46	0.00	0.00	1.48	1.55	1.54	0.00	1.97	0.00	0.00	2.34	4.62	0.00	0.00	1.56	6.47	6.85	3.05	3.41	7.64	0.00	1.89	0.00
35	ER6a	ExonRegion	0	21.04	20.80	5.55	24.57	0.00	1.65	0.65	8.40	1.07	4.70	4.51	7.89	5.01	37.92	2.75	34.28	34.98	87.09	28.50	4.51	128.85	1.45	38.42	13.79	50.40	37.75	23.57	11.35	10.34
36	E6_Da	NovelBoundary	0	0.00	0.00	4.19	0.00	0.00	1.96	0.00	0.00	0.00	5.59	0.00	0.00	0.00	7.22	0.00	0.00	4.01	0.00	0.00	4.13	0.00	2.29	0.00	5.80	3.60	1.72	19.28	0.00	4.09
37	E6a_E7a	KnownJunction	0	20.82	26.95	7.57	40.12	6.48	0.00	0.00	8.61	0.00	5.87	12.02	14.76	3.09	59.07	16.74	27.39	42.57	97.86	48.55	15.22	183.10	1.85	44.13	16.21	69.52	17.85	31.51	14.87	8.52
38	ER6b	ExonRegion	0	23.58	26.50	5.91	44.85	4.32	1.28	1.88	7.86	0.37	7.22	10.95	14.76	2.08	52.85	8.96	20.92	38.13	95.70	33.49	11.43	166.51	1.80	46.17	11.76	63.56	24.20	33.82	11.84	9.57
39	E7_Aa	NovelBoundary	0	0.00	0.00	5.41	8.84	0.00	0.00	2.75	0.00	1.19	7.75	0.00	2.71	0.00	3.26	0.00	3.21	7.97	0.00	16.18	0.00	0.00	2.14	0.00	8.73	7.20	3.26	0.00	6.07	11.16
40	ER7a	ExonRegion	0	16.30	14.26	5.41	25.59	8.70	6.11	0.90	9.51	0.50	6.32	6.79	15.10	5.01	40.83	11.69	35.41	37.20	102.97	27.79	9.37	156.36	0.11	55.12	16.45	53.06	44.27	65.37	14.47	12.70
41	E7_Da	NovelBoundary	0	5.31	0.00	1.30	0.00	0.00	0.00	4.98	0.00	2.71	1.56	2.44	1.54	3.60	3.99	0.00	10.02	5.11	0.00	0.00	0.00	3.57	5.59	0.00	2.51	3.49	0.00	0.00	1.98	1.55
42	E7a_E8a	KnownJunction	0	32.91	18.03	1.54	10.78	14.30	3.88	0.00	25.63	0.00	2.04	6.39	9.37	8.44	62.13	7.37	40.31	39.30	123.04	40.46	18.36	221.37	0.00	58.41	19.50	102.25	53.34	62.32	23.45	10.89
43	ER8a	ExonRegion	0	23.97	29.34	7.88	12.78	9.09	6.01	1.00	11.98	1.70	3.73	6.04	16.18	4.46	51.57	6.91	26.27	36.26	130.44	35.20	8.30	212.52	2.71	41.89	23.02	69.23	34.88	46.36	13.50	19.34
44	E8a_E9a	KnownJunction	0	27.72	25.21	9.54	10.78	0.00	3.34	0.00	22.39	1.55	8.83	14.39	8.37	11.91	42.70	0.00	16.45	40.13	159.38	16.18	4.13	166.42	7.10	38.51	24.94	37.77	57.68	37.72	6.47	6.37
45	ER9a	ExonRegion	0	18.42	27.98	8.10	41.54	2.85	5.89	1.78	13.33	0.72	5.95	6.26	13.73	6.87	47.00	6.66	26.74	41.19	118.33	32.73	6.72	166.90	3.70	41.25	23.45	66.92	37.97	64.06	11.54	17.45
46	E9a_E10a	KnownJunction	0	16.52	44.79	8.62	30.63	0.00	6.68	2.35	13.79	1.55	6.99	2.66	12.56	12.29	58.23	7.57	39.63	36.85	117.13	48.55	8.27	166.30	2.48	27.53	23.21	74.71	25.15	93.88	3.91	13.04
47	E10_Aa	NovelBoundary	0	0.00	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.34	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.11	0.00
48	ER10a	ExonRegion	0	23.31	28.73	7.14	24.64	7.67	11.95	3.93	10.46	0.35	7.62	8.75	14.33	7.79	58.82	10.59	32.91	46.32	125.38	43.12	10.41	262.77	2.01	58.34	28.06	87.74	45.28	78.30	15.08	17.99
49	E10_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.06	0.00	0.00	0.00	0.00	0.00	0.00	3.69	0.00	0.00	0.00	0.00	0.00	0.00	2.29	0.00
50	E10a_E11a	KnownJunction	0	37.69	54.10	6.50	27.18	14.74	12.66	9.67	11.05	4.93	14.86	14.20	11.60	9.04	66.47	8.57	44.75	50.58	200.35	56.65	8.19	379.24	0.00	69.39	35.29	82.44	48.92	112.81	23.72	13.90
51	Ix_AR1	ActiveIntronRegion	0	1.65	0.83	0.00	0.00	0.00	1.06	0.00	0.00	3.01	0.00	0.00	0.94	0.00	1.28	4.00	3.64	0.77	0.49	0.00	0.00	0.73	0.00	0.00	2.21	1.47	1.61	0.00	4.60	0.34
52	E11_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.31	0.00	16.07	1.20	0.00	0.00	0.00	3.14	3.78	0.00	0.00	0.00	0.00	0.00	0.00	2.33	0.00	10.90	1.84	6.43	0.00
53	ER11a	ExonRegion	0	25.31	38.75	10.33	38.18	4.26	16.89	5.65	10.73	3.16	12.87	18.10	22.57	9.21	72.09	23.96	59.10	65.34	137.56	73.04	16.35	322.01	1.24	56.82	37.92	99.22	55.59	121.48	22.02	28.78
54	E11_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.34	0.00	6.20	0.00	3.06	2.10	8.37	2.75	5.38	0.00	0.00	0.00	0.00	2.43	0.00	0.00	0.00	2.10	0.00	2.25	2.94
55	E11a_E12a	KnownJunction	0	22.41	63.60	12.13	51.33	20.34	11.20	5.72	13.93	1.55	8.59	16.10	22.20	14.97	85.50	16.54	52.55	63.30	135.88	48.55	22.00	345.59	0.00	90.18	33.62	101.65	66.90	146.26	33.61	29.58
56	Ix	Intron	0	1.38	0.41	0.64	0.00	0.00	2.30	0.00	0.00	0.43	0.19	1.22	0.00	0.00	1.39	7.08	3.97	1.53	0.00	2.87	1.42	1.28	0.46	0.23	1.38	0.92	4.04	0.24	3.56	0.86
57	Ix_SR1	SilentIntronRegion	0	1.68	0.63	0.98	0.00	0.00	1.61	0.00	0.00	0.44	0.28	0.93	0.00	0.00	2.12	5.75	3.74	2.04	0.00	2.50	2.15	1.11	0.70	0.35	2.10	0.28	2.46	0.00	4.78	1.04
58	E12_Aa	NovelBoundary	0	2.65	0.00	0.00	16.39	0.00	5.10	0.00	0.00	3.01	0.00	0.00	0.00	0.00	4.25	8.97	7.04	5.96	4.62	0.00	0.00	0.00	4.96	2.12	9.09	0.00	0.00	0.00	7.86	3.47
59	ER12a	ExonRegion	0	28.95	39.86	8.24	32.18	9.83	19.08	5.13	11.98	3.16	11.18	16.30	22.45	10.83	83.34	25.02	57.46	58.37	130.35	56.42	21.96	346.82	4.62	60.97	55.30	104.82	56.91	140.86	21.04	30.98
60	E12_Da	NovelBoundary	0	7.96	4.65	0.00	0.00	0.00	1.61	0.00	0.00	3.78	0.00	3.07	0.00	5.06	5.72	0.00	7.34	11.07	18.49	0.00	0.00	13.72	0.00	0.00	2.87	10.84	6.09	0.00	12.67	1.25
61	E12a_E13a	KnownJunction	0	13.86	44.11	5.90	29.77	0.00	21.41	4.52	12.24	2.56	17.70	22.18	19.88	7.45	76.02	7.57	49.19	51.23	160.28	64.74	10.92	393.20	0.00	33.54	58.02	106.19	44.54	142.88	28.67	13.63
62	Ix	Intron	0	2.60	3.46	1.99	5.79	0.49	2.53	0.12	0.63	1.09	1.52	1.08	1.74	1.15	4.49	4.48	5.43	4.52	7.92	5.03	0.61	7.32	0.62	1.39	2.82	3.35	6.70	2.70	10.34	2.73
63	Ix_SR1	SilentIntronRegion	0	3.93	1.53	1.38	1.26	1.62	1.97	0.13	0.46	0.44	0.72	0.99	1.79	0.97	4.31	5.35	3.38	4.71	6.59	3.03	0.00	8.35	0.15	1.73	1.43	2.16	6.13	1.50	8.86	1.74
64	Ix_AR1	ActiveIntronRegion	0	2.14	3.28	0.70	7.31	0.00	2.75	2.02	0.00	1.12	0.00	2.38	1.24	2.60	6.80	5.60	7.59	2.38	19.10	9.05	0.00	13.91	0.00	3.39	0.00	2.86	0.00	14.65	21.80	5.37
65	Ix_AR2	ActiveIntronRegion	0	2.14	6.20	0.25	14.42	0.00	3.74	0.11	1.64	2.09	0.00	1.06	0.96	1.98	9.27	6.53	6.82	1.11	18.42	5.03	0.00	11.45	0.00	1.76	0.06	4.57	7.90	7.12	11.18	4.73
66	Ix_AR3	ActiveIntronRegion	0	3.11	4.51	3.16	6.55	0.00	2.41	0.19	1.68	2.10	1.07	2.43	1.70	1.55	4.89	2.33	7.71	5.67	13.34	7.55	0.75	8.37	1.00	2.26	4.55	6.71	10.62	2.21	16.72	4.41
67	Ix_SR2	SilentIntronRegion	0	1.49	2.17	2.44	7.00	0.00	3.34	0.00	0.43	0.80	2.44	0.11	2.13	0.80	5.37	5.99	4.94	3.97	7.12	3.73	1.16	7.35	1.36	0.92	3.09	2.62	6.72	2.24	9.63	2.71
68	Ix_AR4	ActiveIntronRegion	0	0.07	2.70	0.71	0.00	0.00	4.88	0.00	0.00	1.29	0.47	0.61	2.63	0.69	4.01	3.79	2.08	1.66	5.50	7.66	4.26	4.00	0.00	3.06	4.44	2.42	2.38	11.58	8.89	0.00
69	Ix_AR5	ActiveIntronRegion	0	3.22	3.90	2.24	0.00	0.00	3.01	0.00	0.00	1.12	3.70	2.83	2.94	2.03	3.91	0.00	9.17	2.19	7.85	0.57	2.81	7.49	0.00	2.37	2.29	6.16	7.17	9.27	11.31	1.34
70	Ix_AR6	ActiveIntronRegion	0	1.34	5.92	1.69	8.85	0.66	2.04	0.00	0.25	0.96	2.19	0.74	1.00	2.08	4.55	3.64	6.84	4.33	5.37	5.50	0.46	4.48	0.45	0.76	3.22	2.82	5.10	3.87	9.20	3.52
71	Ix_SR3	SilentIntronRegion	0	3.06	4.47	1.24	8.01	0.00	2.36	0.33	0.00	1.07	1.76	0.96	1.83	0.21	2.06	5.03	4.86	4.52	4.38	5.84	0.00	6.78	0.05	0.29	1.74	1.60	3.73	2.36	4.52	1.14
72	E13_Aa	NovelBoundary	0	8.85	13.96	11.54	47.67	0.00	26.51	4.98	7.22	4.02	0.00	10.85	6.60	12.10	7.87	8.37	27.16	15.53	13.87	24.28	11.50	6.46	4.23	4.97	20.94	3.37	3.35	16.90	50.82	2.77
73	ER13a	ExonRegion	0	7.34	35.79	1.34	15.34	7.41	6.13	1.23	3.08	4.01	4.56	4.97	9.25	4.52	19.22	19.20	19.14	24.66	41.98	32.07	5.93	109.64	0.96	13.46	20.00	24.88	8.23	56.84	5.83	11.29
74	ER13b	ExonRegion	0	0.00	2.63	0.00	2.93	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.74	0.00	0.18	0.00	2.02	0.20	4.91	15.39	0.00	3.14	0.00	0.00	0.00	1.43	0.00	9.16	0.00	0.00