Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	AEN	Gene	0	226.77	130.15	584.64	415.51	223.27	382.51	228.30	344.41	252.17	208.70	344.09	87.70	260.85	66.83	98.30	127.71	122.41	204.68	136.95	102.83	85.98	78.25	272.49	102.21	151.52	184.69	376.92	270.21	69.73
2	332810	Transcript	0	181.06	102.24	487.14	322.11	194.74	300.63	196.81	289.52	204.56	165.18	267.40	67.69	203.05	52.20	82.32	103.53	93.78	167.38	108.41	81.12	69.69	66.59	233.86	80.40	124.56	149.46	308.63	223.42	55.99
3	379231	Transcript	0	293.39	155.80	746.45	605.45	367.99	572.33	408.46	431.47	384.55	372.77	492.39	105.48	356.05	90.22	147.10	268.59	137.78	277.79	129.48	120.00	110.14	95.24	370.26	121.19	213.48	250.70	704.36	297.04	77.61
4	ER1a	ExonRegion	0	30.13	7.62	66.19	119.76	102.30	32.55	44.76	54.09	8.22	29.00	26.15	12.42	34.75	8.03	5.36	34.04	13.02	40.50	11.48	14.87	14.78	16.41	47.88	10.19	10.07	26.24	29.68	30.90	14.61
5	E1_Da	NovelBoundary	0	0.00	0.00	1.02	0.00	7.37	1.96	2.35	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.57	3.21	0.00	0.00	0.00	0.00	0.00	0.00	4.92	0.00	0.00	2.06	0.00	0.00	0.00
6	E1a_E2a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	ER1b	ExonRegion	0	206.73	54.93	469.09	1084.71	514.21	151.37	193.18	229.32	68.04	168.60	263.34	81.57	224.80	57.55	39.52	169.00	108.52	269.58	88.51	97.28	66.41	65.50	285.71	64.53	95.45	179.52	154.15	230.92	73.37
8	I1	Intron	0	8.07	1.76	11.29	3.69	2.43	11.53	1.68	1.08	1.81	2.87	1.95	0.57	0.73	0.65	1.18	1.61	1.27	7.05	1.76	1.90	1.06	0.38	3.73	0.65	1.37	1.82	3.94	3.91	0.34
9	I1_AR1	ActiveIntronRegion	0	19.33	3.27	57.89	15.52	13.51	40.02	8.97	4.21	4.89	7.19	5.57	1.71	3.66	2.16	4.54	7.89	1.26	27.34	5.00	7.68	2.06	2.17	19.80	2.85	4.81	10.21	20.33	17.84	1.69
10	I1_SR1	SilentIntronRegion	0	6.45	1.58	3.29	1.73	0.54	6.94	0.44	0.57	1.30	2.18	1.39	0.39	0.23	0.41	0.63	0.55	1.34	3.69	1.26	0.86	0.94	0.08	0.96	0.28	0.80	0.38	1.16	1.54	0.12
11	I1_AR2	ActiveIntronRegion	0	0.00	0.00	5.61	0.00	0.00	1.37	0.00	0.00	0.00	3.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.73	0.00	0.00	0.00	0.00	1.81	0.00	1.43	0.00	0.00	0.00	0.00
12	E2_Aa	NovelBoundary	0	5.66	0.00	1.54	0.00	0.00	3.49	0.00	0.00	0.00	0.00	1.58	0.00	1.62	0.00	0.00	0.00	1.40	4.62	0.00	3.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.58	0.00
13	ER2a	ExonRegion	0	212.68	75.09	503.65	385.25	181.07	242.90	158.71	238.43	85.75	147.26	208.03	69.89	183.20	59.52	45.63	94.31	119.25	199.86	87.71	96.34	48.36	68.73	215.06	68.88	93.99	136.04	133.47	201.88	44.01
14	E2_Da	NovelBoundary	0	30.14	8.73	17.64	0.00	0.00	20.87	4.86	0.00	0.00	7.67	1.20	0.00	1.59	6.91	0.00	17.75	6.82	13.87	8.09	2.98	0.00	0.00	0.00	2.51	1.40	0.00	1.84	6.87	0.00
15	E2a_E3a	KnownJunction	0	192.59	110.91	689.72	268.97	181.12	242.33	193.61	287.95	88.19	160.66	258.42	83.40	195.40	59.60	35.88	83.61	113.18	215.89	145.66	78.23	48.45	74.24	269.49	52.22	124.64	116.77	177.97	161.80	40.21
16	I2	Intron	0	22.65	6.24	14.94	7.41	2.44	25.43	5.44	6.14	7.08	8.81	7.34	2.32	1.43	4.53	2.64	7.57	11.15	18.68	5.11	1.65	2.95	0.48	1.27	4.37	5.00	4.56	4.70	6.25	0.60
17	I2_AR1	ActiveIntronRegion	0	13.71	8.55	10.18	10.91	1.49	36.21	6.44	7.29	7.60	16.05	9.96	4.22	2.47	4.00	0.70	7.34	13.64	18.82	3.40	2.52	3.04	0.27	0.83	4.58	6.09	2.39	1.95	3.47	0.00
18	I2_AR2	ActiveIntronRegion	0	23.35	5.52	16.17	7.17	3.36	19.96	5.06	5.29	6.11	4.52	10.54	1.91	2.33	3.34	2.10	10.33	8.22	16.73	4.56	1.24	2.84	0.77	0.26	2.82	5.61	7.94	3.92	6.94	0.00
19	I2_SR2	SilentIntronRegion	0	27.23	5.91	17.13	6.41	2.55	24.63	5.46	6.34	7.65	8.13	5.17	1.83	0.66	5.50	3.82	6.80	11.97	20.05	6.32	1.56	3.10	0.46	1.96	5.20	4.53	4.18	6.44	7.41	1.16
20	E3_Aa	NovelBoundary	0	29.96	0.00	28.65	0.00	0.00	14.00	5.55	9.21	1.25	3.91	5.66	0.00	0.00	9.55	14.75	2.91	10.80	4.62	8.09	0.00	1.80	0.00	2.27	5.80	5.11	5.45	4.22	1.93	0.00
21	ER3a	ExonRegion	0	251.97	96.81	675.97	356.36	162.23	301.16	194.43	305.31	113.36	178.69	245.17	73.85	208.34	66.98	63.39	93.89	118.14	231.21	111.46	112.16	62.22	63.77	277.71	74.31	122.89	164.42	184.46	266.97	41.81
22	E3_Da	NovelBoundary	0	40.99	4.65	33.68	21.35	12.08	25.05	21.63	15.93	21.50	25.57	16.23	4.49	0.00	8.69	9.97	20.81	20.62	23.12	16.18	14.97	3.85	0.00	2.31	13.76	14.32	15.11	42.44	15.28	0.00
23	E3a_E4a	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
24	I3	Intron	0	35.13	14.92	29.66	16.59	7.06	35.39	11.85	14.20	27.45	18.51	15.37	4.39	2.63	9.34	5.95	16.78	23.46	27.15	11.09	5.81	7.29	4.34	4.01	11.82	16.68	11.52	14.48	10.37	1.23
25	I3_SR1	SilentIntronRegion	0	36.78	15.06	35.07	19.94	8.41	36.30	12.12	14.17	31.46	20.48	15.94	4.24	2.54	9.17	5.73	18.23	28.02	26.25	9.70	6.29	6.39	5.28	3.46	11.33	16.85	13.28	15.09	10.95	1.30
26	I3_AR1	ActiveIntronRegion	0	31.59	14.95	15.62	7.83	3.56	33.89	11.45	14.65	17.20	13.63	14.26	4.94	2.93	10.06	6.72	13.27	11.58	30.39	15.23	4.68	9.97	1.89	5.63	13.52	16.68	7.00	13.23	9.07	1.05
27	E4_Aa	NovelBoundary	0	31.68	21.52	27.88	30.63	0.00	22.75	5.03	21.70	26.34	17.58	14.96	1.36	6.40	9.77	0.00	25.47	15.58	23.12	0.00	2.98	1.76	1.90	2.12	10.77	16.10	5.66	4.87	15.73	1.82
28	ER4a	ExonRegion	0	173.01	93.26	598.21	408.85	168.00	203.01	156.29	246.73	83.66	109.19	125.75	49.72	121.48	49.78	65.23	66.83	89.52	196.45	83.96	90.06	44.26	63.45	211.86	38.39	87.84	113.88	148.49	151.86	30.79
29	E4_Da	KnownBoundary	0	224.44	111.01	715.68	507.95	218.55	265.50	170.16	306.61	123.03	150.91	176.52	57.17	142.98	62.77	102.05	95.01	100.30	183.53	96.88	76.41	33.33	102.63	290.23	38.16	131.39	142.99	271.60	204.17	51.63
30	ER4b	ExonRegion	0	193.40	78.51	641.10	310.72	185.23	223.65	191.84	262.17	117.23	130.58	169.32	51.81	145.99	51.45	78.37	82.50	95.38	208.02	83.74	86.72	48.13	70.69	261.61	56.35	100.18	136.84	164.79	226.66	37.45
31	E4b_E4c	KnownJunction	0	293.39	155.80	746.45	605.45	367.99	572.33	408.46	431.47	384.55	372.77	492.39	105.48	356.05	90.22	147.10	268.59	137.78	277.79	129.48	120.00	110.14	95.24	370.26	121.19	213.48	250.70	704.36	297.04	77.61
32	ER4c	ExonRegion	0	309.09	163.42	695.61	433.05	248.02	493.34	325.23	507.68	312.01	265.16	445.50	103.26	299.37	79.95	107.92	140.78	139.46	229.11	172.38	124.61	104.51	104.52	375.74	133.08	235.22	217.06	534.14	331.49	74.15
33	E4_Ac	KnownBoundary	0	282.48	155.80	736.24	595.31	343.08	544.09	392.67	418.03	358.94	350.44	468.82	98.85	346.53	85.86	147.10	268.59	132.49	277.79	129.48	109.08	104.09	90.91	360.90	112.69	208.94	236.93	662.22	289.00	72.99
34	ER4d	ExonRegion	0	380.23	236.25	861.55	865.66	440.53	741.99	410.34	578.60	426.71	405.00	658.48	121.52	379.52	89.30	160.07	241.96	159.64	274.47	191.80	133.20	145.05	103.29	423.45	192.15	266.71	240.59	780.83	320.41	101.79
35	E4_Dc	KnownBoundary	0	442.33	340.88	893.72	1207.01	570.33	879.88	366.58	652.08	462.82	449.95	779.00	128.82	420.15	83.20	188.76	280.14	144.24	338.03	250.87	153.24	162.09	82.55	417.83	221.56	332.14	243.67	827.61	335.46	124.06
36	ER4e	ExonRegion	0	191.61	159.42	545.68	424.91	243.42	452.96	225.40	334.13	380.76	235.98	428.64	103.27	332.07	69.38	137.64	156.82	127.24	191.88	166.04	98.30	111.34	74.73	250.21	121.98	152.76	217.70	505.89	304.62	97.74
37	IG19	Intergenic	0	7.77	1.82	2.72	26.73	2.14	4.15	6.05	3.45	4.47	5.38	7.73	0.38	1.61	3.67	38.99	7.97	26.80	9.39	21.76	13.44	2.20	2.10	11.15	6.54	4.35	4.94	5.19	109.03	2.76
38	IG19_SR1	SilentIntergenicRegion	0	0.83	1.65	0.43	2.76	0.00	3.89	3.63	0.24	2.67	2.41	2.61	0.48	1.08	0.12	2.48	2.23	1.15	1.03	2.05	0.71	0.73	0.93	0.46	1.38	1.29	2.83	2.12	1.88	0.00
39	IG19_SR2	SilentIntergenicRegion	0	2.61	1.39	0.87	19.59	0.03	1.51	3.48	2.41	1.44	1.13	4.58	0.47	0.33	2.78	28.45	2.23	4.71	5.76	12.28	1.74	0.37	0.00	2.80	3.55	3.79	2.05	1.10	64.42	0.55
40	IG19_AR2	ActiveIntergenicRegion	0	6.29	2.66	4.71	52.35	5.89	4.58	5.39	10.04	8.80	5.41	2.13	0.50	8.38	4.59	38.27	10.20	26.19	15.51	28.09	91.64	5.06	1.43	14.55	11.80	4.07	6.75	3.98	75.59	1.81
41	IG19_SR3	SilentIntergenicRegion	0	2.73	1.37	1.42	10.05	0.00	3.21	8.26	1.90	1.01	5.94	6.35	0.00	0.57	0.96	40.42	14.99	11.02	4.46	13.95	2.04	1.96	0.05	3.90	2.76	2.20	1.53	0.21	62.53	0.60
42	IG19_AR3	ActiveIntergenicRegion	0	12.07	2.36	3.14	22.72	4.39	4.13	5.73	3.94	5.45	7.92	9.28	0.49	4.42	4.70	57.05	9.92	45.51	8.69	32.37	21.88	3.52	5.28	15.13	10.32	5.71	9.43	3.95	133.21	6.13
43	IG19_AR4	ActiveIntergenicRegion	0	11.98	7.54	2.31	15.49	6.15	3.80	3.68	5.74	7.86	7.39	4.90	1.24	6.57	11.90	53.70	14.14	66.76	11.24	32.75	8.27	3.19	18.03	13.30	18.35	3.87	18.21	1.83	90.90	3.95
44	IG19_AR5	ActiveIntergenicRegion	0	4.29	3.28	3.37	7.31	4.98	6.57	2.02	2.05	6.74	6.74	3.57	1.24	2.74	9.37	31.11	12.93	45.19	11.52	24.64	5.62	2.85	12.02	5.22	8.37	2.86	12.22	1.22	74.98	2.68
45	IG19_SR4	SilentIntergenicRegion	0	3.73	1.87	2.28	7.20	2.38	3.43	5.30	3.09	4.74	4.44	8.62	1.24	0.04	5.08	41.01	11.10	27.85	8.10	19.70	7.91	1.12	1.78	9.65	2.52	1.41	3.55	1.83	87.50	2.17
46	IG19_AR6	ActiveIntergenicRegion	0	5.81	3.56	4.88	25.34	2.85	6.87	4.58	3.21	4.65	8.27	12.45	0.30	0.33	4.38	41.96	6.81	43.27	14.40	25.10	11.78	3.78	0.92	12.11	7.07	5.72	5.57	7.61	133.57	3.66
47	IG19_SR5	SilentIntergenicRegion	0	13.22	0.48	2.97	46.28	1.73	3.65	9.12	4.49	5.36	5.04	9.24	0.23	0.28	4.82	49.87	10.27	28.62	12.53	27.58	8.59	1.46	2.11	17.52	7.53	5.38	3.91	8.98	171.58	3.00