Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	LACTB	Gene	0	124.43	289.01	65.91	90.39	83.73	287.04	76.62	45.55	147.69	119.13	161.49	87.81	150.63	109.35	94.36	105.17	69.08	128.50	110.44	38.61	153.15	172.75	62.64	138.41	124.79	72.47	223.66	58.06	84.03
2	261893	Transcript	0	100.80	217.40	60.95	103.81	60.18	251.14	80.51	34.37	144.33	121.54	143.38	74.22	146.12	81.95	91.77	80.20	56.27	111.61	68.36	30.39	133.26	132.08	50.98	145.16	99.18	57.91	204.77	48.07	85.63
3	413507	Transcript	0	20.92	41.47	1.71	12.17	21.06	43.08	16.80	6.30	22.13	17.60	22.79	9.53	12.38	17.79	2.58	22.40	10.98	29.83	24.58	7.75	26.86	9.01	3.95	22.42	11.43	4.63	6.56	6.39	13.80
4	ER1a	ExonRegion	0	2.14	0.10	0.00	6.24	0.00	3.56	1.30	0.60	0.69	0.89	0.00	1.96	4.13	3.89	0.00	4.69	0.62	12.92	0.00	1.41	2.01	4.77	1.65	1.58	1.43	1.94	0.00	0.72	0.87
5	E1_Ab	KnownBoundary	0	21.82	0.00	3.81	10.78	0.00	10.82	5.21	2.04	1.55	3.56	0.00	4.13	11.97	10.55	0.00	14.46	3.22	36.86	0.00	3.89	10.59	15.51	10.83	12.86	5.30	13.60	2.39	6.20	7.40
6	ER1b	ExonRegion	0	57.71	43.43	20.30	14.50	10.78	31.27	11.77	15.95	10.33	14.80	14.64	20.31	25.00	31.28	16.39	27.72	16.32	63.21	13.68	11.76	20.92	76.89	22.06	18.06	30.18	25.31	14.03	18.47	13.12
7	E1a_E2a	KnownJunction	1	142.63	105.97	85.96	48.32	57.33	90.09	22.43	64.30	34.96	61.16	76.27	67.65	101.17	111.00	25.91	75.43	39.17	130.36	32.37	28.86	62.73	199.23	48.81	53.06	84.60	57.59	91.49	65.20	28.82
8	E2_Aa	NovelBoundary	0	2.83	0.00	1.54	0.00	14.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	10.05	0.00	0.00	0.00	0.00	0.00	0.00
9	ER2a	ExonRegion	0	153.88	128.36	88.49	47.81	51.60	128.73	42.24	55.04	52.03	68.27	98.28	75.47	107.12	125.61	40.71	97.57	69.54	133.85	69.64	22.53	64.08	238.28	71.84	93.91	119.36	66.50	104.26	58.46	56.01
10	E2a_E3a	KnownJunction	0	178.90	187.89	104.44	58.45	67.50	168.43	58.19	58.03	79.30	77.33	165.04	95.24	117.09	144.04	35.28	80.48	93.03	211.78	105.20	30.27	100.20	307.07	87.62	143.80	167.34	118.92	132.54	78.81	73.36
11	E2a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	1.96	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
12	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	2.99	0.00	0.00	0.00	3.91	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	8.18	0.00	0.00	0.00	0.00	2.19	0.00	0.00	0.00
13	ER3a	ExonRegion	0	206.57	338.79	107.28	93.46	91.81	272.11	70.94	66.14	132.45	122.61	194.55	128.59	176.62	180.86	56.12	143.22	107.24	184.90	153.38	42.87	152.60	299.83	104.03	187.57	201.70	99.20	200.25	87.55	89.34
14	E3_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	3.72	0.00	0.00	1.55	2.04	3.16	0.00	0.00	2.37	0.00	0.00	1.31	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
15	E3a_E4a	KnownJunction	0	185.80	476.12	60.67	58.88	113.77	556.06	114.14	48.32	234.45	168.21	230.90	158.10	234.37	178.21	35.08	175.03	115.90	289.87	323.70	36.22	285.95	236.43	91.31	226.22	179.73	93.25	288.30	88.92	142.42
16	E4_Aa	NovelBoundary	0	2.36	0.00	0.00	8.41	0.00	5.79	0.00	0.00	1.89	0.00	0.00	1.87	0.00	1.22	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	0.00	0.00	0.00	0.00
17	ER4a	ExonRegion	0	161.99	589.34	97.95	170.34	160.84	653.54	117.76	34.59	200.38	200.87	290.31	143.53	228.28	160.63	88.50	173.61	103.39	214.59	213.88	60.43	360.00	169.97	83.61	217.34	184.71	76.93	438.98	74.32	126.57
18	E4_Da	NovelBoundary	0	5.96	9.70	0.00	0.00	6.78	18.84	7.38	2.44	3.75	3.64	0.00	1.87	4.62	4.68	0.00	13.08	6.26	23.89	16.18	0.00	18.41	4.67	3.94	13.88	6.82	3.56	0.00	0.00	0.00
19	E4a_E5a	KnownJunction	0	160.74	434.53	71.78	153.36	163.88	553.64	117.23	31.55	218.01	248.62	273.77	132.98	195.37	137.59	84.51	160.80	71.92	168.50	145.44	43.17	315.67	171.76	60.72	226.70	189.43	72.35	341.17	75.66	118.52
20	I4	Intron	0	6.80	7.15	1.21	1.95	2.43	7.40	2.28	1.42	4.46	2.48	1.24	1.59	1.73	3.89	5.88	7.61	2.30	7.65	8.39	1.05	12.66	2.12	2.29	4.09	5.24	0.78	3.40	0.89	1.66
21	I4_SR1	SilentIntronRegion	0	7.65	6.32	1.60	0.96	2.28	8.21	2.76	1.96	2.63	2.39	1.03	1.85	2.20	4.07	4.60	7.72	2.69	9.20	10.32	1.00	10.86	2.52	2.89	4.35	7.00	0.77	3.43	0.87	1.69
22	I4_AR1	ActiveIntronRegion	0	5.04	9.00	0.38	4.09	2.77	5.73	1.28	0.26	8.40	2.71	1.70	1.05	0.73	3.52	8.67	7.44	1.49	4.39	4.34	1.18	16.62	1.28	1.03	3.57	1.51	0.83	3.37	0.93	1.62
23	E5_Aa	NovelBoundary	0	13.51	9.70	1.45	9.06	5.60	1.53	0.00	2.54	5.09	10.71	1.42	1.54	1.97	2.46	8.57	10.48	1.40	4.62	24.28	0.00	8.30	0.00	2.51	8.61	3.67	0.00	0.00	4.00	5.55
24	ER5a	ExonRegion	0	156.95	402.38	79.98	162.64	126.91	504.28	91.05	52.33	173.26	177.83	249.56	129.46	211.35	145.40	91.13	163.06	82.87	180.04	146.74	43.85	292.22	169.34	71.77	215.00	169.01	75.31	372.73	82.60	117.29
25	E5_Da	KnownBoundary	0	25.07	42.66	7.52	19.41	19.01	21.91	5.49	8.86	15.74	24.13	46.95	12.71	16.24	16.73	7.57	22.34	10.74	38.40	24.28	3.64	29.00	6.32	2.51	23.03	12.69	1.89	10.73	8.00	20.57
26	E5a_E6a	KnownJunction	0	159.20	322.65	105.44	202.10	83.85	453.24	130.56	33.79	196.81	208.08	233.08	119.21	231.64	116.59	99.66	119.03	83.49	195.47	80.92	39.20	253.74	160.87	74.17	261.09	146.20	65.70	334.66	70.77	141.03
27	ER5b	ExonRegion	0	20.92	41.47	1.71	12.17	21.06	43.08	16.80	6.30	22.13	17.60	22.79	9.53	12.38	17.79	2.58	22.40	10.98	29.83	24.58	7.75	26.86	9.01	3.95	22.42	11.43	4.63	6.56	6.39	13.80
28	E5_Db	NovelBoundary	0	9.02	29.96	0.00	41.20	12.38	27.82	10.36	3.88	9.53	13.18	17.81	10.90	5.80	12.94	8.37	17.52	11.97	42.38	24.28	15.55	24.47	1.99	0.00	16.21	5.11	4.25	0.00	1.93	13.50
29	I5	Intron	0	1.82	5.72	0.66	1.48	1.01	5.34	0.95	0.34	4.05	1.57	0.97	1.04	0.99	1.55	4.68	2.99	2.96	2.34	2.80	0.57	2.35	0.53	0.29	2.59	1.18	0.59	0.76	1.03	1.03
30	I5_AR1	ActiveIntronRegion	0	12.86	39.32	0.84	3.58	7.33	24.74	12.09	2.76	19.63	6.50	4.76	1.86	0.97	7.46	5.05	12.41	7.46	22.31	27.11	1.38	17.12	3.61	0.89	9.68	12.15	2.36	2.75	5.71	7.00
31	I5_SR1	SilentIntronRegion	0	0.73	5.14	0.40	0.73	0.50	4.70	0.55	0.31	1.90	1.68	1.08	1.00	0.63	1.41	0.97	2.73	1.77	2.52	2.28	0.56	2.24	0.12	0.18	1.58	0.78	0.27	0.81	0.39	0.57
32	I5_AR2	ActiveIntronRegion	0	0.45	5.07	0.52	0.75	0.00	6.67	0.21	0.19	4.17	1.18	0.29	1.58	1.05	1.94	1.06	3.38	0.94	2.06	2.68	0.00	2.34	0.76	0.00	1.88	0.60	0.00	0.19	0.00	0.98
33	I5_SR2	SilentIntronRegion	0	2.56	2.20	0.57	2.45	0.83	2.58	0.34	0.31	2.10	0.74	0.41	1.27	0.55	1.16	3.30	1.69	3.56	1.31	1.63	0.47	1.95	0.61	0.62	3.67	0.24	1.07	1.25	3.34	0.23
34	I5_AR3	ActiveIntronRegion	0	2.22	6.48	0.49	0.70	2.39	5.80	0.79	0.00	3.97	1.54	0.93	0.48	1.38	1.79	4.24	4.80	3.23	0.94	5.15	0.54	1.66	0.00	0.00	2.35	1.04	0.46	0.36	0.71	0.35
35	I5_AR4	ActiveIntronRegion	0	4.82	13.49	0.00	0.00	0.00	2.36	0.00	0.00	5.50	2.42	0.00	0.13	0.19	2.72	2.00	6.24	2.22	0.97	2.91	0.00	2.24	0.00	0.00	3.23	3.98	0.00	0.00	3.09	1.34
36	I5_SR3	SilentIntronRegion	0	2.12	3.41	1.04	0.00	0.00	5.62	0.50	0.89	2.53	2.84	0.89	1.08	1.13	2.63	1.99	2.28	2.66	2.12	2.38	0.68	2.73	0.44	0.45	3.47	1.79	0.25	0.00	1.59	1.83
37	I5_AR5	ActiveIntronRegion	0	3.85	5.50	1.26	3.60	0.00	5.06	1.52	0.33	6.47	0.64	0.20	0.48	1.40	0.79	9.39	1.27	3.20	2.44	1.60	0.92	2.31	0.46	0.30	2.19	0.59	1.02	1.17	1.17	0.79
38	I5_SR4	SilentIntronRegion	0	0.80	2.86	0.92	0.83	1.35	4.66	1.11	0.25	5.56	1.24	1.05	1.09	0.28	0.84	8.33	3.30	3.25	0.44	0.60	0.38	1.24	0.00	0.50	4.22	1.37	0.65	0.59	0.38	0.78
39	I5_AR6	ActiveIntronRegion	0	0.76	5.54	0.59	6.55	1.73	6.20	0.71	0.00	8.48	2.76	0.76	2.25	0.46	1.17	12.27	4.98	4.56	1.83	4.89	0.00	2.29	0.96	0.32	4.44	0.52	0.28	2.92	1.82	1.65
40	I5_AR7	ActiveIntronRegion	0	0.00	0.00	0.00	0.00	0.00	1.37	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.86	0.00	0.00	0.00	0.00	0.00	2.15	0.00	0.00	0.00	0.00	0.00
41	I5_SR5	SilentIntronRegion	0	1.84	6.68	0.64	0.68	2.33	3.75	0.96	0.35	3.27	0.83	2.05	1.00	2.16	1.21	9.94	1.70	5.70	1.99	0.31	1.05	1.36	1.73	0.52	1.96	1.78	1.50	0.00	1.25	1.91
42	E6_Aa	NovelBoundary	0	5.60	9.70	0.00	0.00	0.00	1.69	2.40	0.00	6.91	0.00	0.00	0.00	1.37	1.09	0.00	2.98	4.46	0.00	0.00	0.00	1.72	1.90	1.87	2.51	7.35	1.93	0.00	0.00	0.00
43	ER6a	ExonRegion	0	141.06	329.45	77.42	103.09	96.70	296.61	109.65	68.73	235.50	155.65	197.04	101.49	202.60	125.36	175.65	116.87	84.71	126.45	124.17	50.57	144.03	230.59	77.13	172.80	149.92	106.08	279.63	72.71	114.97
44	IG19	Intergenic	0	2.20	3.04	1.36	1.52	1.04	6.60	2.54	2.25	3.96	1.82	1.48	0.64	1.26	2.03	2.93	3.66	3.73	2.08	2.66	4.35	1.26	0.73	0.83	5.41	1.75	1.78	1.27	1.42	0.33
45	IG19_AR1	ActiveIntergenicRegion	0	4.39	5.89	1.85	3.67	1.25	11.02	5.33	3.61	6.12	1.85	2.84	1.27	2.35	5.27	6.50	8.80	7.14	2.80	5.18	8.00	1.71	1.69	1.54	10.19	2.34	3.10	3.12	2.22	0.80
46	IG19_SR2	SilentIntergenicRegion	0	1.85	2.86	1.56	0.83	1.13	6.70	2.62	2.44	3.12	2.18	0.48	0.39	1.68	1.31	2.07	2.02	2.27	3.22	2.67	3.92	1.07	0.31	1.16	6.20	1.81	1.44	1.27	0.67	0.43
47	IG19_AR2	ActiveIntergenicRegion	0	2.19	2.32	2.88	0.73	1.50	9.35	2.78	3.01	7.13	2.93	2.80	0.75	1.32	1.93	4.98	3.70	5.90	1.97	3.10	6.75	1.90	0.74	0.53	5.07	3.08	2.75	0.00	2.48	0.00