Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	CHAC1	Gene	0	4.85	8.82	3.14	2.74	9.59	0.94	6.15	30.21	3.26	2.01	14.40	5.21	8.28	1.12	0.30	3.12	3.66	5.91	1.13	3.41	3.03	11.20	27.50	7.86	2.45	0.56	1.15	11.46	4.16
2	446533	Transcript	0	0.47	0.00	0.33	0.00	8.92	0.00	0.71	0.19	0.00	0.51	0.00	0.00	0.00	0.25	0.00	0.75	0.11	0.34	0.00	0.00	0.25	0.00	0.32	1.80	0.00	0.28	0.00	0.57	0.00
3	444189	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	397434	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
5	249798	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
6	487220	Transcript	0	0.19	0.57	0.20	0.32	0.43	0.00	0.35	1.68	0.10	0.13	1.14	0.32	0.45	0.04	0.00	0.33	0.17	0.12	0.00	0.12	0.43	0.31	1.42	2.62	2.36	0.00	0.00	0.71	0.06
7	ER1a	ExonRegion	0	0.47	0.00	0.33	0.00	8.92	0.00	0.71	0.19	0.00	0.51	0.00	0.00	0.00	0.25	0.00	0.75	0.11	0.34	0.00	0.00	0.25	0.00	0.32	1.80	0.00	0.28	0.00	0.57	0.00
8	E1_Ab	KnownBoundary	0	2.48	0.00	0.00	9.49	7.22	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	1.13	0.00	0.00	1.40	0.00	0.00	0.00	0.00	0.00	0.00	2.81	0.00	0.00	0.00	0.00	0.00
9	ER1b	ExonRegion	0	1.90	0.07	2.22	0.00	3.51	0.00	0.00	0.88	0.00	0.00	0.14	0.22	0.03	1.44	0.00	1.50	1.00	0.06	0.00	0.00	0.00	0.08	0.12	3.08	0.00	0.00	0.00	0.07	1.53
10	E1_Ac	KnownBoundary	0	0.00	0.00	2.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.14	0.00	0.00	0.00	2.75	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.37
11	ER1c	ExonRegion	0	4.53	7.66	2.42	4.12	0.89	0.00	4.93	16.08	1.33	0.68	8.93	4.31	3.53	0.62	0.00	4.22	1.02	4.25	0.00	1.84	2.17	6.95	20.17	3.30	0.66	0.00	0.00	7.09	4.92
12	E1a_E2b	KnownJunction	1	5.84	17.16	5.48	9.49	14.74	0.00	4.86	41.16	1.55	3.95	26.16	7.68	12.61	1.13	0.00	9.79	1.19	5.01	0.00	3.97	12.63	8.80	29.89	10.59	0.00	0.00	0.00	23.99	2.01
13	E2_Aa	NovelBoundary	0	3.01	9.31	0.00	0.00	0.00	0.00	2.92	0.00	0.00	0.00	5.50	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
14	E2_Ab	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.05	3.71	0.00	0.00	0.00	0.00
15	ER2a	ExonRegion	0	0.19	0.57	0.20	0.32	0.43	0.00	0.35	1.68	0.10	0.13	1.14	0.32	0.45	0.04	0.00	0.33	0.17	0.12	0.00	0.12	0.43	0.31	1.42	2.62	2.36	0.00	0.00	0.71	0.06
16	ER2b	ExonRegion	0	3.80	9.29	7.47	2.51	5.55	1.02	10.42	38.19	2.63	3.30	21.83	6.86	9.17	1.37	0.00	7.16	7.27	8.66	0.00	4.10	7.87	9.84	30.07	10.33	3.59	0.00	0.00	17.88	2.61
17	E2_Da	NovelBoundary	0	0.00	3.88	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.04	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00
18	E2a_E3a	KnownJunction	0	0.00	4.85	7.13	0.00	6.78	1.84	13.79	25.48	3.17	1.92	12.46	4.82	1.62	1.99	0.00	2.75	10.51	0.00	0.00	3.97	3.97	7.15	31.13	6.10	1.93	0.00	0.00	14.92	4.36
19	I2_AR1	ActiveIntronRegion	0	0.00	0.91	0.00	0.00	0.00	0.39	0.00	1.04	0.00	0.00	0.00	0.00	0.00	0.26	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.51	1.83	0.00	0.00	0.00	0.00	0.00
20	ER3a	ExonRegion	0	3.78	4.15	6.65	0.00	3.44	0.82	9.02	37.30	3.08	1.24	20.03	5.98	2.47	0.60	0.00	1.02	9.90	7.54	0.00	4.95	6.38	7.51	36.90	10.70	2.18	0.07	0.00	17.12	7.13
21	E3_Da	KnownBoundary	0	5.31	4.85	4.58	0.00	13.12	0.00	4.92	32.00	3.11	2.00	18.47	6.90	1.97	1.00	0.00	0.00	8.67	4.62	0.00	6.78	7.22	9.24	38.81	8.43	1.70	0.00	0.00	8.36	12.45
22	E3a_E3b	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.54	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
23	ER3b	ExonRegion	0	6.81	15.70	1.72	0.00	17.07	1.43	11.41	46.20	3.06	2.24	19.80	15.48	9.85	1.37	0.00	4.52	6.05	7.79	1.20	4.42	6.08	12.80	45.84	11.53	3.30	2.17	4.05	15.87	8.75
24	E3_Ab	KnownBoundary	0	2.18	4.85	1.05	0.00	16.80	1.69	24.72	43.45	8.50	2.04	22.33	13.13	11.15	1.29	0.00	9.33	9.88	0.00	0.00	3.47	7.82	9.04	53.04	5.74	3.75	3.35	7.11	4.09	8.25
25	ER3c	ExonRegion	0	8.07	11.56	5.57	4.90	14.72	0.70	10.09	44.24	6.51	2.81	24.07	9.28	14.72	2.28	0.00	4.07	7.39	8.81	2.87	5.63	4.85	17.45	48.01	8.56	3.38	0.81	1.66	15.73	7.66
26	E3_Db	KnownBoundary	0	5.07	9.70	6.28	0.00	20.34	0.00	15.10	49.17	3.11	0.00	17.91	4.82	10.13	2.17	0.00	3.82	9.14	13.87	0.00	3.89	0.00	11.18	61.41	2.69	5.42	0.00	0.00	10.96	3.37
27	ER3d	ExonRegion	0	7.38	12.67	5.76	5.71	15.68	2.29	10.16	58.40	5.07	4.49	22.85	6.57	14.69	1.74	0.71	4.33	6.15	11.49	2.93	5.31	4.22	16.76	46.01	15.84	5.13	0.82	1.22	21.12	3.69
28	E3_Dc	KnownBoundary	0	0.00	26.47	0.00	8.20	14.59	1.53	5.78	27.52	4.57	0.00	26.19	3.67	10.48	1.13	0.00	0.00	5.02	9.25	0.00	11.91	6.54	6.27	23.98	2.81	6.55	0.00	0.00	8.22	0.00
29	ER3e	ExonRegion	0	4.08	10.88	1.74	0.91	8.05	1.26	3.25	26.19	4.54	1.50	15.34	3.02	10.10	0.89	0.81	1.84	2.53	3.98	0.47	4.24	2.19	16.71	20.24	6.88	2.56	0.47	2.17	10.42	3.87
30	ER3f	ExonRegion	0	2.14	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.30	0.15	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00