Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	SERPINA9	Gene	0	13.48	0.00	0.88	4.37	0.27	1.75	41.44	0.46	0.03	0.44	4.81	5.33	0.18	1061.72	1404.69	272.92	49.34	924.46	1687.53	516.63	1453.99	2860.28	2818.08	264.59	531.78	3161.73	725.66	15963.52	8682.71
2	298845	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
3	337425	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
4	448305	Transcript	0	3.01	0.00	2.19	0.00	0.00	0.00	10.24	0.00	0.00	0.00	0.00	3.07	0.00	260.07	286.22	41.16	17.35	222.57	218.50	76.66	215.87	542.03	549.92	122.08	124.68	1315.96	176.97	3582.39	1952.98
5	380365	Transcript	1	0.71	0.00	0.00	0.00	0.00	0.00	4.03	0.00	0.00	0.00	0.40	1.65	0.00	141.80	100.81	48.08	7.68	93.70	126.72	80.57	417.46	775.18	390.58	5.74	65.27	846.58	252.75	5564.41	4302.10
6	424550	Transcript	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0	0
7	ER1a	ExonRegion	0	0.00	0.00	0.00	0.00	0.00	0.02	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.54	1.61	3.07	0.00	3.92	3.62	0.53	2.01	5.70	10.42	0.03	1.13	33.04	1.01	107.11	24.85
8	E1_Ab	KnownBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.18	8.17	20.65	0.00	9.25	16.18	3.23	13.08	27.86	35.80	0.00	1.82	192.51	0.00	554.95	76.92
9	ER1b	ExonRegion	1	14.13	0.00	2.42	9.30	4.22	1.18	35.91	0.00	0.00	0.00	0.42	6.24	0.00	761.84	1036.97	394.64	44.03	1089.24	1259.06	428.48	1585.42	3995.19	3525.29	124.89	512.82	7509.17	1155.40	27352.99	15483.68
10	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	11.79	0.00	0.00	0.00	0.00	1.80	0.00	0.00	0.00	60.69	16.34	6.81	3.60	58.56	32.15	29.03	36.26	45.02	28.32	0.00	4.58	119.34	16.30	1124.01	249.88
11	E1a_E2a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.63
12	E1a_E2b	KnownJunction	1	0.00	0.00	0.00	0.00	0.00	0.00	7.15	0.00	0.00	0.00	1.27	4.88	0.00	376.73	339.04	96.01	19.29	302.45	299.42	223.87	866.66	1123.98	664.62	22.55	157.98	1981.90	620.77	11091.34	11888.82
13	E1a_E2d	KnownJunction	0	3.01	0.00	2.19	0.00	0.00	0.00	10.24	0.00	0.00	0.00	0.00	3.07	0.00	260.07	286.22	41.16	17.35	222.57	218.50	76.66	215.87	542.03	549.92	122.08	124.68	1315.96	176.97	3582.39	1952.98
14	E1a_E2e	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.97	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.74	7.55	0.00	11.55	29.84
15	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.93	0.00	0.00	0.00	0.00	8.09	0.00	1.56	0.00	0.00	0.00	0.00	4.29	0.00	4.18	29.71
16	I1	Intron	1	0.92	0.00	0.00	0.00	0.00	0.35	0.60	0.02	0.00	0.00	0.01	0.23	0.00	57.73	42.70	20.95	3.71	72.87	40.20	5.89	30.13	16.36	9.91	3.09	12.46	39.91	8.28	231.18	34.06
17	I1_SR1	SilentIntronRegion	1	0.65	0.00	0.00	0.00	0.00	0.17	0.45	0.00	0.00	0.00	0.02	0.26	0.00	47.68	24.22	16.47	3.26	70.09	24.64	5.64	23.15	14.50	8.88	2.29	8.61	37.86	4.79	204.71	26.78
18	I1_AR1	ActiveIntronRegion	1	0.00	0.00	0.00	0.00	0.00	0.23	0.00	0.00	0.00	0.00	0.00	0.00	0.00	46.71	49.01	23.54	4.34	85.97	21.72	6.18	33.71	9.95	11.99	0.47	23.11	62.79	9.25	257.08	36.01
19	I1_AR2	ActiveIntronRegion	1	0.79	0.00	0.00	0.00	0.00	0.70	0.53	0.00	0.00	0.00	0.00	0.13	0.00	61.02	51.55	27.25	4.51	73.59	39.19	4.88	37.61	11.90	8.20	3.16	15.94	36.11	8.50	214.06	39.68
20	I1_SR2	SilentIntronRegion	1	1.05	0.00	0.00	0.00	0.00	0.00	0.51	0.00	0.00	0.00	0.00	0.93	0.00	81.50	83.21	27.40	3.67	75.73	91.43	4.80	50.38	25.47	17.43	6.49	23.12	55.25	16.46	352.50	42.90
21	I1_AR3	ActiveIntronRegion	1	3.07	0.00	0.00	0.00	0.00	0.89	1.84	0.24	0.00	0.00	0.00	0.00	0.00	112.84	116.58	34.24	4.86	93.66	127.19	9.94	50.84	39.40	18.59	7.28	23.62	58.27	28.12	423.74	67.56
22	I1_SR3	SilentIntronRegion	1	1.02	0.00	0.00	0.00	0.00	0.00	0.96	0.00	0.00	0.00	0.00	0.00	0.00	25.24	46.85	7.95	2.85	43.46	12.18	7.85	11.56	3.44	2.59	1.03	4.77	13.48	0.00	59.76	14.69
23	E2_Aa	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	20.23	7.97	6.81	3.56	0.00	0.00	0.00	15.36	2.48	0.00	5.02	0.00	9.27	0.00	40.03	7.36
24	E2_Ab	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.13	10.17	0.00	0.00	0.00	0.00	0.00	1.97	0.00	0.00	0.00	3.79	8.63	0.00	9.03	1.95
25	E2_Ac	NovelBoundary	1	3.01	0.00	0.00	0.00	0.00	1.96	2.40	2.04	0.00	0.00	0.00	4.31	0.00	247.47	165.24	59.67	7.52	136.39	265.93	91.13	381.73	487.63	268.02	15.67	47.55	478.45	151.33	4028.87	2707.93
26	ER2a	ExonRegion	1	0.71	0.00	0.00	0.00	0.00	0.00	4.03	0.00	0.00	0.00	0.40	1.65	0.00	141.80	100.81	48.08	7.68	93.70	126.72	80.57	417.46	775.18	390.58	5.74	65.27	846.58	252.75	5564.41	4302.10
27	ER2b	ExonRegion	1	0.25	0.00	0.00	0.00	0.00	0.00	3.56	0.00	0.00	0.00	0.56	4.15	0.00	329.26	229.95	77.26	16.15	240.97	356.21	156.90	654.79	908.58	516.74	15.56	103.58	1315.73	420.50	7741.53	8418.33
28	ER2c	ExonRegion	1	7.10	0.00	0.51	0.00	0.00	1.07	13.77	0.54	0.00	0.43	0.00	3.55	0.00	565.32	588.74	237.08	26.86	639.26	825.14	305.57	984.25	2331.87	1571.93	19.06	242.79	3352.09	249.67	13578.67	9462.68
29	E2_Ad	KnownBoundary	1	2.48	0.00	0.00	0.00	0.00	1.92	7.61	0.00	0.00	0.00	0.00	5.27	0.00	499.12	570.65	149.48	30.52	671.43	784.52	213.03	606.31	804.52	2368.71	11.84	148.70	2045.25	1076.20	15425.25	8339.11
30	ER2d	ExonRegion	1	4.95	0.00	2.24	1.22	0.00	0.59	17.23	0.00	0.00	0.00	0.00	5.92	0.00	690.16	628.47	155.76	42.43	660.39	885.98	272.10	569.20	1489.28	2105.68	120.87	222.67	2306.14	946.64	14228.38	7171.05
31	E2_Da	KnownBoundary	1	2.60	0.00	2.54	8.20	0.00	0.00	10.41	0.00	0.00	0.00	0.00	3.07	0.00	616.97	708.18	151.62	31.74	508.97	906.13	234.45	386.90	1522.69	1409.38	124.42	185.79	1134.01	780.25	9935.92	4207.83
32	E2a_E2e	KnownJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.62	0.00	0.00	1.64	2.33	0.00	0.00	0.00	0.00	0.00	4.13	4.85
33	ER2e	ExonRegion	0	16.15	0.00	0.83	6.20	0.00	1.16	29.25	0.00	0.00	1.22	0.26	5.14	0.33	1049.14	1075.08	248.96	40.27	958.34	1369.36	506.44	958.10	3019.80	2668.76	250.53	506.02	2593.59	523.72	11600.41	6652.64
34	E2_Ae	KnownBoundary	0	15.40	0.00	2.17	9.06	0.00	0.00	60.70	0.00	0.00	0.00	3.23	4.37	0.00	1098.59	1056.99	293.98	48.91	880.13	1358.64	532.50	1193.77	2821.02	2721.98	313.55	510.01	2457.48	536.09	13260.81	7109.23
35	ER2f	ExonRegion	0	15.83	0.00	1.37	5.80	0.00	1.89	42.89	0.00	0.00	0.43	2.47	5.66	0.89	1306.25	1323.71	307.40	57.07	1084.59	1795.69	583.28	1347.21	3603.43	3422.66	316.86	596.31	2941.34	634.85	14953.90	7310.17
36	E2_Db	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.56	8.37	3.52	0.00	19.26	0.00	0.00	5.17	0.00	0.00	0.00	0.00	0.00	0.00	40.30	8.25
37	E2b_E3a	KnownJunction	0	13.74	0.00	1.12	0.00	0.00	0.00	49.03	0.00	0.00	2.04	6.36	9.01	0.00	1185.71	1266.48	283.81	68.32	360.12	685.39	580.38	1335.52	3436.13	3279.98	331.38	615.07	2681.10	791.38	13074.52	6702.30
38	E2b_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	9.25	0.00	0.00	1.72	0.00	0.00	0.00	0.00	8.24	0.00	8.49	24.07
39	I2	Intron	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.21	11.86	3.13	0.34	20.59	6.51	0.57	4.52	0.27	1.09	0.16	0.32	3.20	1.38	17.95	5.04
40	I2_SR1	SilentIntronRegion	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	6.23	11.90	3.14	0.34	20.65	6.53	0.57	4.53	0.27	1.09	0.16	0.32	3.21	1.39	18.01	5.05
41	E3_Aa	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	5.61	8.37	3.82	1.98	4.62	0.00	4.13	3.97	4.38	2.51	0.00	0.00	6.48	0.00	36.39	12.02
42	ER3a	ExonRegion	0	18.91	0.00	0.93	5.18	0.00	3.11	58.63	0.69	0.00	0.64	4.31	6.34	0.00	1405.24	1695.21	322.35	70.37	1083.10	1976.96	668.53	1725.49	3457.81	3877.59	326.73	669.68	3764.75	955.56	19849.75	8890.95
43	E3_Da	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.71	7.77	0.00	2.59	9.25	16.18	0.00	12.19	0.00	0.00	0.00	1.86	3.52	0.00	51.00	5.15
44	E3a_E4a	KnownJunction	0	43.89	0.00	0.00	7.98	0.00	5.49	130.11	0.00	0.00	0.00	2.88	4.94	0.00	1607.42	2453.23	346.46	77.48	1323.47	2791.23	656.14	2557.92	3997.80	5297.49	452.56	841.58	6443.73	1304.51	33307.08	15367.55
45	I3	Intron	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.19	8.24	3.17	1.11	16.01	12.69	0.73	6.72	0.80	1.14	0.56	1.33	5.37	0.61	34.25	11.47
46	I3_SR1	SilentIntronRegion	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	7.21	8.27	3.18	1.11	16.06	12.73	0.73	6.75	0.81	1.15	0.56	1.33	5.39	0.61	34.37	11.51
47	E4_Aa	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	16.91	9.97	9.64	1.15	19.78	24.28	0.00	8.18	4.52	0.00	3.05	0.00	4.38	5.81	54.95	40.05
48	ER4a	ExonRegion	0	24.24	0.00	1.34	5.24	0.00	3.55	57.99	0.00	0.00	0.00	9.10	5.58	0.03	1604.38	2141.93	337.49	66.55	1290.99	2596.60	766.91	2009.77	4093.86	3838.79	454.89	870.14	3593.63	1006.90	18752.02	10243.18
49	E4_Da	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	46.93	56.01	47.74	2.36	18.49	8.09	0.00	12.19	7.15	0.00	13.46	12.69	13.99	0.00	47.85	23.64
50	E4a_E5a	KnownJunction	0	13.68	0.00	2.49	0.00	0.00	1.96	30.21	0.00	0.00	0.00	5.28	5.78	0.00	1250.14	1698.80	222.76	53.19	1079.71	1982.43	599.65	1227.30	2816.98	2830.72	412.25	546.65	2263.64	1170.57	15704.05	10556.10
51	I4	Intron	1	0.16	0.00	0.00	0.00	0.00	0.00	0.59	0.00	0.00	0.00	0.00	0.23	0.00	39.63	33.89	21.62	1.54	12.68	19.54	0.35	8.73	7.84	1.20	6.03	10.96	5.91	1.48	53.12	26.14
52	I4_AR1	ActiveIntronRegion	1	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	25.10	9.07	16.31	1.01	8.37	8.17	0.00	2.84	5.72	0.41	4.49	8.00	1.13	0.00	25.09	6.93
53	I4_AR2	ActiveIntronRegion	1	0.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	45.41	19.31	21.72	1.86	9.89	24.36	1.25	7.62	8.10	1.71	3.47	14.53	8.55	0.48	63.08	33.15
54	I4_SR1	SilentIntronRegion	1	0.00	0.00	0.00	0.00	0.00	0.00	1.02	0.00	0.00	0.00	0.00	0.39	0.00	40.32	46.76	22.89	1.51	15.08	19.92	0.00	10.65	8.21	1.14	7.63	9.95	5.77	2.32	55.02	27.28
55	E5_Aa	NovelBoundary	1	0.00	0.00	0.00	0.00	0.00	0.00	2.57	0.00	0.00	0.00	0.00	1.27	0.00	76.33	77.93	37.56	4.34	28.51	8.09	0.00	7.34	11.18	2.51	18.06	13.83	11.20	0.00	102.08	74.54
56	ER5a	ExonRegion	0	11.00	0.00	0.52	3.82	0.00	1.63	53.40	0.98	0.10	0.26	10.31	5.92	0.22	1129.82	1879.91	277.49	54.57	929.80	2149.84	556.52	1872.52	2522.43	2765.00	341.95	582.43	2717.39	818.32	16884.80	9225.76
57	IG39	Intergenic	0	0.48	0.00	0.00	0.18	0.00	0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	4.62	4.12	0.98	0.04	0.45	9.77	1.59	0.54	3.98	2.99	0.81	0.29	8.51	0.64	21.08	9.45
58	IG39_SR1	SilentIntergenicRegion	0	0.48	0.00	0.00	0.18	0.00	0.00	0.00	0.00	0.00	0.00	0.03	0.00	0.00	4.62	4.13	0.98	0.04	0.45	9.78	1.59	0.54	3.98	2.99	0.81	0.29	8.52	0.64	21.10	9.45