Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	BATF	Gene	0	698.09	898.75	2042.24	1648.35	48.85	567.58	1961.74	2501.05	1566.83	1617.38	785.87	990.03	1867.55	102.89	424.10	493.59	324.60	101.87	56.75	82.15	430.86	804.71	220.83	106.77	479.04	197.95	679.89	36.71	205.68
2	286639	Transcript	0	862.26	1086.50	2571.97	1915.05	56.54	692.85	2651.53	3330.75	2119.28	2338.82	1302.45	1434.76	2446.80	130.46	516.44	665.63	468.08	138.46	79.13	104.13	530.52	945.70	316.05	131.36	645.31	274.74	1028.54	49.18	288.86
3	IG10_AR3	ActiveIntergenicRegion	0	4.29	3.65	7.11	0.00	0.00	4.28	0.22	1.02	4.99	5.61	3.17	3.71	1.30	0.91	5.60	5.06	0.00	0.00	0.00	0.00	3.96	3.20	0.00	0.00	0.00	3.14	1.22	0.00	0.00
4	ER1a	ExonRegion	0	660.28	827.52	1760.97	1664.41	66.02	608.59	1899.77	2312.86	1537.84	1733.77	952.78	964.72	1883.54	92.28	339.58	589.73	332.68	97.48	57.17	73.68	465.97	864.30	213.37	114.45	496.64	226.39	925.13	43.74	247.29
5	E1_Da	NovelBoundary	0	12.21	8.14	3.61	8.20	0.00	0.00	5.21	9.60	8.44	9.43	2.88	2.68	4.30	0.00	0.00	3.82	0.00	0.00	0.00	0.00	9.39	0.00	0.00	2.87	0.00	0.00	6.86	0.00	0.00
6	E1a_E2a	KnownJunction	0	645.01	1294.48	929.20	500.62	20.63	646.19	3578.04	2728.22	2343.02	3739.82	2571.07	2014.24	3117.08	143.82	523.81	943.61	664.20	171.84	97.11	98.08	553.08	602.71	505.35	124.83	832.45	384.94	1391.73	52.84	397.94
7	I1	Intron	0	11.85	5.97	7.88	11.21	1.17	7.54	5.23	8.32	11.35	7.50	2.86	4.87	2.68	1.21	1.61	3.07	3.52	0.56	0.69	0.31	5.28	2.95	0.78	0.67	2.58	0.23	3.66	0.12	0.84
8	I1_SR1	SilentIntronRegion	0	11.88	5.97	7.89	11.23	1.18	7.55	5.24	8.34	11.37	7.51	2.87	4.88	2.68	1.21	1.61	3.07	3.52	0.56	0.69	0.31	5.29	2.95	0.78	0.67	2.58	0.23	3.66	0.12	0.84
9	E2_Aa	NovelBoundary	0	16.10	12.22	15.05	0.00	0.00	14.96	4.86	17.27	21.07	21.37	4.21	7.80	4.20	7.05	0.00	7.19	7.07	13.87	0.00	3.89	3.77	9.38	0.00	0.00	1.93	1.93	0.00	0.00	3.30
10	ER2a	ExonRegion	0	1166.97	1289.03	2956.26	2399.60	99.25	980.35	3825.22	5036.18	3306.69	2870.38	1575.69	2112.53	3471.48	177.30	614.04	757.39	650.32	158.16	75.30	130.01	703.78	1332.91	420.34	181.15	849.38	429.25	2024.09	93.04	445.84
11	E2_Da	NovelBoundary	0	0.00	0.00	3.54	0.00	0.00	7.44	2.52	8.91	7.95	8.83	0.00	1.14	7.67	0.00	0.00	0.00	7.41	0.00	0.00	0.00	16.85	0.00	0.00	0.00	1.93	1.63	0.00	0.00	0.00
12	E2a_E3a	KnownJunction	0	1213.04	1159.53	5190.65	3522.47	68.09	768.35	2330.87	4474.65	2174.40	2052.20	882.76	1302.90	2225.70	144.77	669.51	652.84	438.73	171.71	113.29	141.42	574.18	1264.63	256.05	149.00	653.67	198.18	534.75	34.96	220.03
13	I2	Intron	0	8.04	12.53	6.53	4.18	0.21	8.20	6.19	7.79	19.29	25.45	7.96	9.39	4.33	1.36	3.87	6.64	5.17	0.87	1.06	0.19	13.72	1.37	0.64	1.09	3.73	1.09	2.70	0.36	1.02
14	I2_SR1	SilentIntronRegion	0	14.29	12.90	8.60	3.94	0.32	14.50	9.65	8.82	26.03	37.93	11.81	13.94	5.17	1.55	3.43	9.36	8.06	0.94	1.34	0.18	23.29	3.32	0.70	1.60	4.90	1.63	2.55	0.37	1.04
15	I2_AR1	ActiveIntronRegion	0	15.47	14.93	12.43	5.63	0.00	15.17	5.18	16.83	31.27	37.30	10.44	14.85	4.97	3.03	4.17	14.94	4.50	1.51	0.00	0.53	18.07	3.14	0.28	1.69	3.80	4.28	7.45	0.19	1.26
16	I2_SR2	SilentIntronRegion	0	10.62	15.53	5.84	4.66	0.39	9.91	5.00	6.94	22.27	26.13	10.44	12.64	4.43	1.65	2.59	7.90	5.28	1.32	1.49	0.35	16.64	0.57	0.52	0.53	3.61	0.77	4.73	0.14	0.69
17	I2_AR2	ActiveIntronRegion	0	19.29	25.25	2.81	7.31	0.00	12.37	6.05	16.68	10.53	42.59	21.20	10.44	5.76	1.36	3.15	9.02	4.70	0.00	3.68	0.00	23.18	0.00	0.00	2.15	5.00	0.00	0.00	0.00	1.34
18	I2_AR3	ActiveIntronRegion	0	14.09	18.54	1.20	0.00	0.00	6.87	4.90	9.47	8.91	23.41	15.05	8.57	3.90	0.65	5.60	0.00	1.00	0.00	0.00	0.00	17.32	0.00	0.00	1.08	4.29	0.00	0.00	0.00	1.34
19	I2_AR4	ActiveIntronRegion	0	3.52	7.06	0.51	5.68	0.00	6.13	2.39	3.03	23.01	26.35	8.68	8.50	3.78	1.55	1.57	3.95	5.14	0.00	0.00	0.00	13.84	0.48	0.48	0.57	1.87	0.42	0.00	0.00	0.02
20	I2_SR3	SilentIntronRegion	0	5.29	11.57	5.18	3.49	0.17	5.06	3.94	5.28	15.97	20.41	5.36	6.05	3.97	0.83	3.52	4.68	3.80	0.84	0.89	0.19	10.94	0.88	0.43	0.71	3.22	0.47	2.30	0.17	0.95
21	I2_AR5	ActiveIntronRegion	0	5.98	11.09	9.23	2.16	0.00	8.15	7.33	10.10	14.14	25.15	8.82	8.26	1.65	1.42	7.22	4.67	2.86	0.29	1.08	0.00	11.13	0.73	0.69	1.83	3.64	1.09	3.69	0.41	1.00
22	I2_SR4	SilentIntronRegion	0	5.80	11.78	6.09	5.14	0.17	6.16	7.35	8.76	17.37	21.98	6.11	8.00	5.06	1.39	4.26	6.28	5.83	0.79	0.96	0.15	9.74	1.45	0.95	1.28	3.85	1.32	1.17	0.71	1.34
23	E3_Aa	NovelBoundary	0	11.09	22.78	23.87	39.04	0.00	8.79	19.28	34.14	16.26	26.08	3.07	12.65	10.54	0.00	19.13	12.55	8.69	0.00	0.00	0.00	8.18	6.76	2.36	0.00	3.67	2.06	0.00	0.00	0.00
24	ER3a	ExonRegion	0	626.01	861.93	2022.77	1488.16	28.73	460.79	1623.76	2101.82	1234.44	1297.95	529.96	779.43	1536.22	94.15	435.25	384.56	254.50	93.12	52.79	77.48	355.59	663.92	185.12	87.37	394.42	134.92	267.01	21.30	133.19
25	IG11_AR1	ActiveIntergenicRegion	0	0.43	0.00	0.11	0.00	0.00	2.75	0.00	0.00	0.11	3.47	0.00	0.12	0.00	0.00	0.00	0.00	0.30	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
26	IG11_SR1	SilentIntergenicRegion	0	0.44	0.93	2.30	1.14	0.22	1.52	1.24	1.17	5.96	2.83	1.65	2.99	2.14	0.15	2.32	1.08	1.39	0.09	0.26	0.13	1.69	0.98	0.62	0.05	0.55	0.50	0.42	0.19	0.23
27	IG11_AR2	ActiveIntergenicRegion	0	0.00	0.00	1.16	0.77	0.00	0.89	0.43	0.20	2.25	1.31	0.00	0.89	0.28	0.00	0.00	0.80	0.00	0.00	0.14	0.00	0.22	0.39	0.39	0.23	0.00	0.00	0.79	0.00	0.00