Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	TCL1A	Gene	0	164.10	1683.92	2946.03	1886.63	0.00	580.38	2569.35	291.72	443.95	1735.20	5487.08	5495.94	2931.37	490.02	186.84	1557.05	4964.78	1533.31	2699.61	5792.01	12.57	295.99	5332.85	130.55	78.44	587.74	1056.56	13450.97	29.21
2	216612	Transcript	0	111.31	900.77	2761.69	2741.66	0.00	185.93	695.05	252.06	203.67	837.22	2344.44	2084.03	1173.50	365.56	69.16	604.80	2051.50	1012.80	1957.93	4264.46	3.37	196.56	2668.99	62.93	51.37	229.68	565.56	6479.57	20.04
3	402399	Transcript	0	84.85	914.93	2328.89	1650.03	0.00	137.05	794.54	167.41	164.59	662.60	2866.76	3543.69	1309.98	235.04	88.16	661.82	2152.27	871.76	1080.33	3853.01	1.43	185.76	2340.91	97.57	47.96	181.76	400.02	3886.53	7.10
4	IG8_AR4	ActiveIntergenicRegion	0	2.18	8.53	10.61	29.11	0.00	3.14	46.03	0.93	0.99	19.78	11.47	34.87	1.15	1.95	3.51	2.34	92.05	6.84	43.77	388.88	0.36	28.36	11.01	4.37	0.36	2.79	0.00	8.69	0.00
5	IG8_AR2	ActiveIntergenicRegion	0	0.00	2.09	0.95	50.21	0.00	1.56	3.20	1.61	0.00	13.05	0.27	9.86	0.00	0.51	0.00	0.00	37.28	11.12	26.81	307.51	0.00	27.60	8.87	6.08	0.00	1.38	0.00	5.18	0.30
6	IG8_AR1	ActiveIntergenicRegion	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.27	0.00	1.87	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.36	0.00
7	ER1a	ExonRegion	0	93.89	505.18	1151.31	1421.93	0.00	414.33	2634.77	130.02	354.14	945.60	1441.56	3706.66	1924.06	151.98	54.59	1724.11	4225.76	787.32	995.45	2063.74	12.91	178.00	3790.32	29.79	26.31	523.70	396.66	9946.37	29.11
8	E1_Da	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.79	3.01	4.91	0.00	2.42	0.00	13.08	13.35	10.02	8.09	31.34	0.00	2.43	0.00	0.00	0.00	0.00	0.00	2.07	0.00
9	E1a_E2a	KnownJunction	0	194.30	929.85	560.41	500.19	0.00	192.14	629.53	254.20	241.40	595.63	1543.10	2174.75	1228.75	353.33	80.33	583.30	1958.26	783.94	1100.58	6521.82	3.37	375.08	1420.66	125.49	49.10	149.51	280.64	2966.11	10.60
10	I1	Intron	0	2.83	21.61	13.18	30.13	0.00	9.01	10.08	0.96	3.02	16.55	26.32	24.41	5.78	10.31	3.04	17.29	49.08	32.17	30.60	45.67	0.20	2.04	11.01	2.03	0.74	1.63	4.32	30.61	0.16
11	I1_SR1	SilentIntronRegion	0	2.43	20.36	7.37	19.17	0.00	10.19	7.87	0.58	2.05	14.52	26.41	16.32	1.71	8.76	2.49	15.83	35.88	32.55	30.74	43.68	0.09	0.57	5.90	1.22	0.27	0.60	4.82	20.22	0.00
12	I1_AR1	ActiveIntronRegion	0	0.00	4.93	0.00	25.59	0.00	3.21	0.00	0.00	0.00	2.89	11.90	3.92	0.00	4.38	0.00	0.00	12.02	2.73	5.28	16.40	0.00	0.00	2.11	0.00	0.00	0.00	2.14	10.87	0.00
13	I1_AR2	ActiveIntronRegion	1	4.16	25.99	31.46	64.06	0.00	5.60	17.20	2.14	6.09	23.24	26.55	49.97	18.47	15.26	4.81	22.29	90.92	31.92	30.98	52.77	0.55	6.64	26.99	4.59	2.22	4.88	2.85	63.22	0.65
14	E2_Aa	NovelBoundary	0	11.56	37.23	44.32	19.84	0.00	5.87	4.98	0.00	9.01	16.74	25.43	69.40	20.57	30.60	16.74	16.98	108.76	18.49	88.79	38.95	5.41	11.04	29.01	0.00	2.96	7.55	4.22	72.07	1.82
15	ER2a	ExonRegion	0	234.64	1896.21	1793.36	1177.01	0.00	851.48	4935.66	395.21	675.81	2619.34	5973.23	8020.43	4139.45	598.42	230.16	3269.94	8319.54	2168.58	3262.97	7487.74	24.06	415.86	8482.76	149.72	99.49	1125.77	1174.24	21223.24	49.30
16	E2_Da	NovelBoundary	1	4.95	17.06	13.98	30.20	0.00	6.68	0.00	0.00	0.00	7.43	16.17	19.25	1.85	3.52	0.00	23.56	43.13	43.15	16.18	8.27	0.00	9.67	2.22	0.00	1.63	5.71	0.00	64.43	0.00
17	E2a_E3a	KnownJunction	0	219.07	1910.21	5065.80	2861.80	0.00	342.43	1508.18	326.07	372.07	1398.69	4235.27	5070.57	2249.80	622.36	222.24	998.92	4425.28	1497.62	2572.28	8078.14	5.74	337.11	3837.39	219.82	90.85	338.25	677.03	8705.92	15.45
18	E2a_E4a	NovelJunction	0	0.00	0.00	8.30	10.78	0.00	0.00	4.81	0.00	0.00	0.00	1.61	4.31	3.38	0.00	0.00	0.00	5.29	14.26	16.18	19.85	0.00	0.00	1.97	0.00	0.00	2.02	2.53	14.06	0.00
19	I2	Intron	1	3.03	8.16	15.47	36.84	0.00	7.06	6.21	0.95	1.66	9.09	12.38	14.56	2.24	4.07	0.71	12.98	32.98	18.81	15.60	24.95	0.18	4.63	6.50	1.93	0.92	2.22	4.00	34.55	0.00
20	I2_SR1	SilentIntronRegion	0	3.58	9.68	17.07	38.96	0.00	7.68	7.02	0.47	2.03	10.25	14.89	14.94	2.91	4.29	1.09	12.90	37.10	20.35	14.53	24.11	0.28	3.87	5.40	1.71	0.85	2.66	4.03	34.08	0.00
21	I2_AR1	ActiveIntronRegion	0	2.05	5.48	12.73	33.46	0.00	6.02	4.81	1.83	0.99	7.07	7.95	14.08	1.05	3.72	0.00	13.31	25.88	16.24	17.78	26.85	0.00	6.11	8.63	2.37	1.05	1.45	4.01	35.92	0.00
22	E3_Aa	NovelBoundary	0	5.19	17.06	18.36	76.36	0.00	1.96	2.40	2.34	0.00	5.79	4.46	29.28	1.59	2.08	8.37	28.99	55.87	4.62	24.28	45.15	0.00	6.22	15.17	0.00	3.33	2.19	4.67	35.23	0.00
23	ER3a	ExonRegion	0	190.38	1789.54	5770.89	3525.30	0.00	318.19	1444.80	346.24	328.09	1388.82	4756.79	5415.23	2419.48	612.68	188.36	1093.74	4383.40	1691.25	2846.38	7944.97	5.07	355.10	4472.97	168.97	90.40	369.46	761.36	9103.93	23.53
24	E3_Da	NovelBoundary	0	19.82	274.37	1170.75	564.03	0.00	40.90	271.31	37.37	62.28	208.12	820.66	1391.51	506.74	84.90	6.98	240.36	1038.26	148.21	192.87	1263.48	1.80	57.03	702.74	31.34	8.87	62.31	119.97	1148.81	2.51
25	E3a_E4a	KnownJunction	1	111.31	900.77	2761.69	2741.66	0.00	185.93	695.05	252.06	203.67	837.22	2344.44	2084.03	1173.50	365.56	69.16	604.80	2051.50	1012.80	1957.93	4264.46	3.37	196.56	2668.99	62.93	51.37	229.68	565.56	6479.57	20.04
26	E3_Db	NovelBoundary	0	2.24	17.55	34.31	9.27	0.00	7.52	7.15	7.02	4.66	16.98	18.51	24.25	15.99	10.68	0.00	56.46	249.63	4.50	0.00	69.96	0.00	9.09	2.51	8.85	3.75	0.00	2.09	45.29	0.00
27	E3b_E4a	KnownJunction	0	88.24	881.18	2247.35	1732.22	0.00	136.09	805.36	164.33	175.25	661.06	2899.40	3513.28	1286.38	228.81	95.67	670.21	2097.95	882.19	1011.11	3845.84	0.00	186.20	2352.07	100.49	54.18	189.38	407.72	3942.47	5.61
28	ER3b	ExonRegion	0	81.45	948.68	2410.44	1567.83	0.00	138.02	783.72	170.48	153.92	664.14	2834.12	3574.10	1333.57	241.27	80.65	653.43	2206.59	861.33	1149.56	3860.18	2.85	185.32	2329.76	94.65	41.74	174.14	392.31	3830.59	8.59
29	I3	Intron	1	5.63	63.22	66.50	33.12	0.00	9.46	23.19	3.34	12.44	45.65	70.40	44.47	38.07	24.11	11.92	91.97	424.61	57.18	37.91	206.63	0.52	7.19	26.54	9.55	2.33	10.82	12.28	121.68	0.91
30	I3_AR1	ActiveIntronRegion	0	4.54	49.43	52.12	48.29	0.00	7.41	16.68	3.19	9.93	35.83	51.76	37.26	36.76	20.12	9.55	83.80	417.14	66.11	27.67	201.23	0.55	6.94	20.53	7.87	2.48	10.28	7.40	114.17	0.64
31	I3_SR1	SilentIntronRegion	0	7.32	76.63	38.68	14.43	0.00	10.99	29.41	3.09	17.04	63.13	85.23	47.49	35.54	28.30	14.22	104.34	381.21	50.31	54.70	235.91	0.48	7.98	31.76	12.23	2.56	11.41	13.52	128.97	1.12
32	I3_AR2	ActiveIntronRegion	1	5.94	75.32	123.21	25.34	0.00	11.77	28.92	3.91	12.38	45.87	89.99	55.14	43.67	27.34	14.00	95.20	490.03	48.78	39.57	188.47	0.51	6.90	32.44	9.95	1.86	11.33	20.11	129.42	1.18
33	E4_Aa	NovelBoundary	0	10.26	81.63	68.22	29.12	0.00	5.64	15.91	4.78	14.37	51.41	65.77	54.55	22.10	13.78	9.97	49.19	457.61	33.13	32.37	174.66	0.00	8.51	19.40	10.23	0.00	3.95	4.52	141.94	4.75
34	ER4a	ExonRegion	0	168.68	1963.58	3511.64	2065.05	0.00	589.78	2163.27	313.64	431.42	1804.38	6553.13	5511.31	3009.12	556.28	215.12	1209.43	4563.51	1609.53	3057.26	6378.53	10.71	302.48	5207.30	152.54	88.18	515.03	1233.74	13190.10	25.77
35	IG7	Intergenic	0	0.13	2.48	1.13	0.50	0.08	0.07	1.19	0.06	0.31	2.96	3.26	0.99	0.78	2.11	0.27	9.73	33.35	7.02	7.17	25.34	0.05	0.53	2.11	0.55	0.21	0.69	0.63	9.73	0.12
36	IG7_SR1	SilentIntergenicRegion	0	0.13	2.48	1.13	0.50	0.08	0.07	1.19	0.06	0.31	2.96	3.26	0.99	0.78	2.11	0.27	9.73	33.36	7.02	7.17	25.35	0.05	0.53	2.11	0.55	0.21	0.69	0.63	9.73	0.12