Order	SeqName	SeqType	IsAE	ABC_RG012	ABC_RG016	ABC_RG015	ABC_RG046	ABC_RG047	ABC_RG048	ABC_RG049	ABC_RG058	ABC_RG059	ABC_RG061	ABC_RG073	ABC_RG074	ABC_RG086	GCB_RG003	GCB_RG005	GCB_RG006	GCB_RG007	GCB_RG010	GCB_RG014	GCB_RG045	GCB_RG050	GCB_RG055	GCB_RG062	GCB_RG063	GCB_RG064	GCB_RG071	GCB_RG072	GCB_RG069	GCB_RG085
1	ALKBH1	Gene	0	96.84	63.19	74.69	145.98	57.05	79.33	116.68	129.24	62.23	68.08	75.93	60.57	86.64	56.34	63.52	58.31	68.06	43.99	80.30	82.14	66.58	78.14	69.32	67.06	58.85	75.35	61.86	93.20	73.32
2	216489	Transcript	0	142.91	75.77	112.40	175.11	89.82	109.39	162.91	183.75	56.04	86.97	86.40	76.12	90.53	74.90	66.00	76.51	77.74	60.34	99.63	127.51	85.60	117.72	95.39	81.17	86.58	105.67	76.33	127.08	88.16
3	ER1a	ExonRegion	0	39.42	20.67	36.47	184.80	59.67	60.66	129.82	62.88	16.75	25.69	25.40	36.19	38.48	24.11	20.16	29.21	46.49	41.35	27.53	53.11	33.25	47.27	40.31	18.73	14.84	40.26	13.52	48.86	42.67
4	E1_Da	NovelBoundary	0	2.24	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.86	1.84	0.00	0.00	0.00	0.00	0.00	0.00	1.17	0.00	0.00	3.72	0.00	0.00	1.87	2.99	0.00	0.00	0.00	3.86	0.00
5	E1a_E2a	KnownJunction	1	141.39	86.87	23.15	0.00	26.53	246.51	220.62	222.25	39.01	83.25	87.12	63.04	75.82	63.59	77.73	99.91	65.43	108.65	89.02	267.61	176.41	148.09	67.32	58.80	94.07	98.70	28.48	61.42	72.40
6	E1a_E3a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	3.57	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
7	E1a_E4a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	3.72	0.00	2.29	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.80	0.00	0.00	1.93	0.00	0.00	0.00	0.00
8	E2_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	5.26	0.00	1.43	3.56	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	1.85	0.00	0.00	3.04
9	ER2a	ExonRegion	0	124.14	72.54	95.31	103.99	66.22	139.43	303.97	181.66	46.96	117.57	122.45	87.92	102.44	70.83	98.34	95.31	96.55	99.68	147.03	142.39	90.48	100.89	136.12	72.47	70.57	210.53	139.40	271.86	134.50
10	E2_Da	NovelBoundary	0	5.78	3.97	0.00	0.00	0.00	5.56	0.00	0.00	0.00	0.00	0.00	0.00	1.62	0.00	7.77	0.00	3.58	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	3.95	0.00	0.00	0.00
11	E2a_E3a	KnownJunction	0	121.92	91.13	260.24	356.54	229.16	123.39	166.15	166.77	52.84	53.69	59.57	64.94	47.54	72.63	62.98	75.05	70.68	41.61	89.02	139.35	80.78	91.35	57.62	81.95	67.85	49.05	70.02	98.49	47.21
12	E2a_E4a	NovelJunction	0	5.43	0.00	4.09	10.78	0.00	5.18	2.92	4.73	0.00	1.96	0.00	0.00	1.43	4.32	0.00	0.00	1.80	0.00	0.00	11.41	0.00	5.83	2.02	2.57	3.45	0.00	2.53	2.29	0.00
13	I2	Intron	0	1.61	1.94	0.66	0.92	0.26	1.15	0.39	0.57	2.84	1.64	0.65	1.05	0.37	1.03	2.89	0.56	2.49	1.13	3.12	0.86	2.28	0.31	0.16	0.92	0.71	0.54	0.53	0.95	0.72
14	I2_SR1	SilentIntronRegion	0	1.61	1.94	0.66	0.92	0.26	1.15	0.39	0.57	2.84	1.64	0.65	1.05	0.37	1.03	2.89	0.56	2.49	1.13	3.12	0.86	2.28	0.31	0.16	0.92	0.71	0.54	0.53	0.95	0.72
15	E3_Aa	NovelBoundary	0	0.00	0.00	0.00	0.00	0.00	0.00	2.80	0.00	1.55	1.76	1.61	0.00	1.18	2.19	0.00	3.60	1.28	0.00	8.09	0.00	1.60	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00
16	ER3a	ExonRegion	0	157.60	92.22	152.05	366.49	157.09	102.75	145.06	188.72	53.14	100.98	95.71	76.06	100.84	91.07	69.75	75.60	65.47	77.79	130.80	139.41	78.56	129.64	101.50	92.29	95.50	84.93	75.15	103.01	92.96
17	E3_Da	NovelBoundary	0	3.01	0.00	0.00	0.00	0.00	3.15	0.00	0.00	0.00	0.00	3.61	0.00	0.00	1.11	8.17	0.00	5.00	9.25	8.09	0.00	0.00	0.00	0.00	3.05	0.00	0.00	0.00	0.00	0.00
18	E3a_E4a	KnownJunction	0	185.21	78.92	106.64	152.28	104.04	70.10	139.09	155.52	58.38	90.84	76.59	59.13	83.46	91.60	66.97	79.02	73.45	42.13	113.29	134.55	74.20	143.18	105.25	122.26	94.26	77.63	60.08	119.88	104.32
19	I3	Intron	0	1.12	4.45	0.29	0.87	0.89	4.92	1.69	0.67	2.30	2.15	0.95	0.83	2.45	1.36	1.66	0.98	2.41	5.76	8.27	1.02	2.87	0.18	1.27	1.73	0.68	0.73	1.79	1.30	0.94
20	I3_AR1	ActiveIntronRegion	0	7.29	2.80	0.72	0.00	0.00	5.01	13.12	6.79	5.80	1.79	2.78	2.27	0.70	3.26	5.43	1.08	0.97	16.57	27.02	0.00	3.50	0.39	2.34	1.40	1.84	0.68	0.27	2.48	2.03
21	I3_AR2	ActiveIntronRegion	0	1.51	7.79	0.35	0.00	2.06	6.27	1.06	0.52	3.07	3.62	0.84	2.62	4.71	1.54	0.54	0.85	2.27	12.48	17.10	0.39	1.82	0.27	2.39	1.52	0.92	1.99	1.60	0.50	0.03
22	I3_SR3	SilentIntronRegion	0	0.98	7.60	0.45	1.45	1.61	9.46	1.80	0.42	3.11	2.50	1.21	0.81	4.63	1.74	1.88	1.05	3.75	7.76	10.19	1.95	4.10	0.27	2.18	2.50	0.67	1.11	4.16	1.60	1.12
23	I3	Intron	0	0.75	4.28	0.45	1.15	0.26	3.35	1.08	0.54	1.65	1.97	1.31	0.88	0.80	0.73	2.02	1.84	4.24	1.78	4.54	1.14	2.68	0.58	0.34	1.56	0.42	0.76	0.64	0.66	1.06
24	I3_SR1	SilentIntronRegion	0	0.78	4.46	0.47	1.20	0.27	3.50	1.13	0.57	1.73	2.06	1.36	0.91	0.83	0.76	2.11	1.91	4.42	1.86	4.73	1.19	2.79	0.60	0.35	1.62	0.44	0.79	0.67	0.68	1.10
25	E4_Aa	NovelBoundary	0	0.00	4.17	6.55	0.00	0.00	4.95	2.40	0.00	2.56	4.07	0.00	8.13	0.00	1.02	8.37	0.00	4.52	0.00	0.00	0.00	1.56	0.00	0.00	5.62	3.71	0.00	0.00	4.58	0.00
26	ER4a	ExonRegion	0	169.50	79.16	118.11	122.79	81.40	107.24	132.88	182.73	58.13	111.57	100.01	84.88	96.67	94.85	70.41	94.72	92.20	48.14	83.11	133.86	88.75	139.62	122.74	101.60	104.64	112.31	95.24	151.68	98.07
27	E4_Da	NovelBoundary	0	0.00	4.17	3.09	0.00	0.00	0.00	0.00	0.00	0.00	4.59	0.00	0.00	0.00	1.22	0.00	3.14	3.85	0.00	8.09	0.00	4.09	0.00	0.00	0.00	0.00	0.00	0.00	0.00	2.01
28	E4a_E5a	KnownJunction	0	166.40	101.41	109.13	129.42	63.37	104.36	138.00	275.45	76.77	129.18	133.40	109.31	136.17	96.16	60.39	87.90	104.53	52.66	153.76	99.74	94.74	166.66	145.19	138.71	126.50	151.49	128.12	160.27	114.26
29	E4a_E6a	NovelJunction	0	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	0.00	4.57	0.00	0.00	3.52	0.00	0.00	0.00	0.00
30	I4_SR1	SilentIntronRegion	0	1.13	0.00	0.00	0.00	0.00	1.59	1.75	0.00	1.03	2.05	0.72	0.00	0.00	1.77	2.51	0.00	4.46	0.00	0.00	0.00	0.68	0.00	0.00	2.32	0.00	0.00	0.00	0.00	2.86
31	E5_Aa	NovelBoundary	0	0.00	0.00	2.54	10.78	0.00	5.37	0.00	0.00	7.34	0.00	0.00	1.27	0.00	0.00	0.00	6.04	6.10	4.62	0.00	0.00	0.00	0.00	0.00	7.90	0.00	6.01	0.00	2.29	7.16
32	ER5a	ExonRegion	0	178.41	68.07	119.78	175.28	47.09	88.92	148.65	229.62	65.31	97.65	89.07	93.44	111.36	88.13	56.09	76.01	96.53	58.54	70.87	108.12	75.52	133.64	118.34	83.65	104.28	120.38	66.52	147.35	105.53
33	E5_Da	NovelBoundary	0	2.42	0.00	1.15	9.71	0.00	1.96	2.92	0.00	4.81	0.00	0.00	0.00	0.00	0.00	9.97	3.82	1.98	4.62	0.00	0.00	1.64	0.00	0.00	4.67	0.00	0.00	0.00	2.29	1.45
34	E5a_E6a	KnownJunction	0	204.44	79.31	151.86	211.81	106.25	86.71	170.33	241.17	80.61	84.92	87.00	106.96	116.71	80.41	77.34	74.97	79.17	57.02	113.29	113.30	83.35	128.01	97.22	56.29	127.45	153.55	104.07	157.31	91.28
35	I5	Intron	0	1.73	2.58	1.24	2.90	0.33	2.04	2.17	1.49	2.42	1.36	0.88	0.87	0.13	0.37	0.62	1.84	3.62	1.82	0.86	1.30	1.06	0.73	0.00	1.74	0.67	1.06	0.37	1.54	0.54
36	I5_SR1	SilentIntronRegion	0	1.74	2.59	1.25	2.91	0.33	2.05	2.18	1.50	2.43	1.37	0.89	0.88	0.13	0.37	0.62	1.85	3.64	1.83	0.87	1.31	1.06	0.73	0.00	1.75	0.68	1.06	0.37	1.55	0.54
37	E6_Aa	NovelBoundary	0	5.49	0.00	0.00	0.00	0.00	1.61	5.15	0.00	6.00	8.15	3.23	3.13	0.00	3.04	16.94	2.75	12.04	4.62	8.09	4.13	6.02	4.08	0.00	0.00	3.64	1.72	0.00	4.58	0.00
38	ER6a	ExonRegion	0	83.61	63.20	63.67	122.89	47.19	73.24	97.49	114.53	68.57	61.37	74.12	55.44	86.37	50.50	65.87	53.94	64.65	36.22	78.23	71.20	65.54	66.54	57.70	66.08	52.43	63.55	58.99	77.73	66.53
39	IG40_SR3	SilentIntergenicRegion	0	0.64	0.00	0.47	0.00	0.00	0.00	0.00	0.00	0.61	5.11	1.08	0.00	0.00	0.00	0.00	1.18	0.10	0.00	0.00	1.50	0.00	0.00	0.00	0.00	0.06	0.00	0.00	0.00	0.74